NONHSAT112844

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT112844

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2739 nt

Genomic location

chr6+:42751234..42759057

Exon number

2

Exons

42751234..42753057,42758142..42759057

Genome context

Sequence
000001 AGTTGCTCGG CGGGCGCCAT CTTTCTCGCG GCGCGGGCGG CGCCCTCCGA GGACATCTCG ATGACCAGGG CGCCGCGAGG 000080
000081 CCCGGGGCTA GCGGGAGCCG AGAGCAGGGT GCTGAATTCT GGAGATGGGA CTGGGGTCGC TCGGCCTTCT CCTTCCCCAC 000160
000161 GCCCCCAGAC CCAAAAGACG AGGCCGCCGG CTCGGAGCGG GAAGGGCTGG GGCCAGCTTC TTTCTCCTAA CCACTTGTTT 000240
000241 GTGATGGAAG AAGGGGGCTG GGGATCGAGC CTCGCGGCTG ATGGGTTCCC TCCCTGACCC CGCACCCCCA CTCCTCCCAG 000320
000321 TCGAAATTGG AGGTGAGGCG CTCCTGCCAT TTTCTCTCCT GCGGTCTGAG AGTGGACGTC TTTGTCTTCT CTGGCCCGGC 000400
000401 GTGGGGGCAG GGCATTGAGC CTTTTCCTTA ATTCTTCAGT TATTGAAAGT AGAGTCCAAC CAGGTTACAA AACTAAAAAA 000480
000481 AAGAGTCCAG GACATTGTCT GTCTGCCTTC CGGTAGCATG GTTCTCTGTG GGTACCCTAC GCTTTGTTTC TTAGTTTTAC 000560
000561 TCTAAAACAA CCCTGAGGAG ACATTTACTA GTTGTCAGAT TACGGGAAGG TGATGGGTTC CAGTTTTTTG AAACTTTTTT 000640
000641 TGTTGGCTTT CATATTACTT CAAATGGCAG TGAATTAAAA CAGTTTCTTA GAACTCTAAT CTGAAAAGTT AAATACGCTT 000720
000721 TAAAACAGTC TGAAACTCTT CTAAAAAGCA AAACTGCATT ATTAAAAGCA TCCATGTAAG TATCTGTTGG TAGTATCTAT 000800
000801 TAGAGATGGG GGAGGGGTTT AACTTTTACA TTATTATTGA AAAGAGGAGG GGAAAGGTCT ATAAAGCTCT GATCTCTCTA 000880
000881 GAAGTCCACA TACATGGAAA GTAAATAGTT AATTTCTAGT GTAGAAAAAT AACACCGTGG TGCCAGTAGG TGTGTCCTTG 000960
000961 TGTTTATAAA TATACATAGT GGATGTTTTA GACCATTTAA TGAGACCTAT TATATATTGA ATACCTGCTG TATGCCAGGA 001040
001041 ACTGTGCCTG ATGCTTTGTA TAATTTCTAT TATATCAGCC CAGAAATAGT GATTTTATGA TCTGTCTACC GGGGAATGAA 001120
001121 CTAACGTTCA TAGAAGTATA GTAATTGTTC GAGGTCTTGC AGTTTTAAGT AGTAAAGTTG CCATTGGATC ACAAAAGCTG 001200
001201 TATTCTTCCC CCTACACCTA TGGTTTCCAA ATGTGAGCAT CAGAATTAAT TTGGGAGATG TTTTTAAATA GAGATTTGTA 001280
001281 ACATCACCTC TTCCACCATC ATTTGCTAGG GCCAACTGGG TCTTTTAATA ATGTGTCAGG CACTCCAACT TCTTGATGTT 001360
001361 CAATATTGAC ATTCTGGCCC ACCCTGCACC TGCTATATCC AAAGATCTAG TATTCCAAAG CTCTCCAGGT GATTCCAGTG 001440
001441 ACACAGACAC ACGTTTGGAC TGTCTTGTAC TATGCTATGC GCTGTTCTGC TCTTTTTTGA ATTGGAACAT GAGAATTGAG 001520
001521 GTCCATGTAA TTTTGAGTTT CAGTAGTTTT TTGCTCACAT TAGTCTCATT TTTGTTTTTC CTCTTGTAGC TGCCATTTAT 001600
001601 CAAATCGAAA TTATTTCCTC AGAGAAAAAG GTTTAGGTAT CCTAAGACTT TAAAATCTCA GTACGTTTTT TTTTAAAGTA 001680
001681 TGTTGTCTCA TTCTATTGAG AAGTTATACA ACATACAGGC TTCTAGGTCT AGCCAGGCCA TCTAGTTTAG TCAAGACAGC 001760
001761 TGTGTAACAA ACGTAGCCTT GAGGCCTGGC ACGGTGGCTC ATGCCTGTAA TCCCAGCACT TTTGGGGCTC AGGCGGTCTT 001840
001841 CCCGCCTTTC CCTCCCAAAG TGCTGGGATT GCAGGCGTGA GCCACTGCAT CCTGCCGAGA AAATCATTTT TTATTTAAAT 001920
001921 AATGTCAAAT GGAAGTATGT AGCACCCCCC CCCACCTTCT TTTCCCCTTT CTTTCCTCTT TGAGTCTGCT GTCATTCCCT 002000
002001 TTTTCATGAG TTTTCTCTGC TCCCCAAATA GGCTAAACAA TAACCGTAAA GTGAGATTAG AGAAAATAAG AATGGAGTAG 002080
002081 ATGATGGAAT TCAAAATAGC TGTCTACATT CTTCACTGAG AAAGATAGCT TTGAGTTAAA GGTGAGAGGA GCAAATCTGG 002160
002161 GGAAAAACGG GTGAAACGGC ATGATTTAAG TAGCATACCA GATGCGTTTC TGCATGGCAT GGCTCTTGCT TGATGAATAA 002240
002241 TGTTCTGTAT AGTAGAAGAG GAAAATACAG TGAGTGAAGG AGCTGGCAGA AGGTGGGCTG GGGGAGTTGG GGAAGAGTGA 002320
002321 AATGAGTATG GAGAGGTGAG AGAGCTGACT GCAAAGGCAT GTGGGGTGTG GATTTTAAAA GGAAAGCCCT GAGGTGGAAA 002400
002401 TCACTAACAT GGTGCCTGGC TACAAGCAGA GGGAGCTCAG GACTTGACTG TGCTGGGGGT GGCCTGCCCT TTTGTAGTGC 002480
002481 AGTTGAGGAG AGCTCAGGGG CTGTCAGAAT GCTGTGTGGG AAGGTGGAGG ACGAAAGAGG ACCTGGGAGC AGCAACTTTG 002560
002561 TTCTGGTTTG TTGTTTTCTC TTCCCTACCT CGTATGTACT CCCACTCAGG AAAAGATCCT GAGACCTCTC TGTACCAGAT 002640
002641 CCTCTTATAC CCAGGTTCTC CTTAATCCCA ATCAACTTTA ATCTATAAAG TTACGATTTG TTTACTTATA AATTTATTTT 002720
002721 TAATAAAGTT GTGAAACCG
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Predicted Small Protein

Name NONHSAT112844_smProtein_1355:1588
Length 78
Molecular weight 8721.1236
Aromaticity 0.142857142857
Instability index 54.6805194805
Isoelectric point 4.52130126953
Runs 8
Runs residual 0.0321852060982
Runs probability 0.0401210033562
Amino acid sequence MFNIDILAHPAPAISKDLVFQSSPGDSSDTDTRLDCLVLCYALFCSFLNWNMRIEVHVIL
SFSSFLLTLVSFLFFLL
Secondary structure LLLLLLLLLLLLLLLLLEEEELLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLEEEEEEEE
EHHHHHHHHHHHHHHHL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHH
HHHHHHHHHHHHHLLLL
PiMo oooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTT
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