NONHSAT114767
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114767 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2619 nt |
Genomic location |
chr6+:123433143..123435761 |
Exon number |
1 |
Exons |
123433143..123435761 |
Genome context |
|
Sequence |
000001 TTTGTTCTTT CACTCTTCAC AGTAAATCTT GGCTGCTGCT CACTCTTTGG TTCTGCATTA CAGCAAGGGT CTGCTGCTTC 000080
000081 ACTCCTGAAG TCAGCTAGAC CATGAACCCA CCAGGAGGAA CAAACTCTGG ACACACCATC TTTAAGAACT GTAACACTCA 000160 000161 CTGGGAGGAG CCACAGCTTC ATTCTTGAAG TCAGCAAGAC CAAGAACCTA CCGGAAGTAA CCAATTCCAG ATACAATGTC 000240 000241 ATACTACATT TCAACAAACA TTGTGCTACA ATACAATGCA TTTAAAATAT TTGGACTTTT TCAAACTTTC AACTTTTAGA 000320 000321 AGACTAACAT TTTCTTTAAA ATATATGTTG CTTTTCTCTG TTATTTATGG GTTATTTAGC CAACAATTTG TGATTGAAGC 000400 000401 TGTGTGTCCA AGCAATTGGA GCTTCTGAAT TTAATAAAAA CAAATCTTCA CCATTTGGTT TCCATTATTT AGCACAATGA 000480 000481 AGTAAATACT GTGCCTTTAA ATGCTTTTTT GACATACTAT TTAAATGTTT TATTGACATA TTATTTAATC TGTGTAATAA 000560 000561 TACTATGTAT AGGTCATATA ACACCTATTT TAAAATGAAG AAATAAGGCC CAGAGAATTT AAATAAATCA CCCAAGGTCA 000640 000641 CACAGACAAT CAAAAGCAGA GCTAAATTTT TAACCCAGGT TTATCTAACT CCAAAGCTCA TGGTCTTAAT CACACTGTAG 000720 000721 TTTACATTGC ATTATTTAAA TGAGTGAGCA TCATTATTAA GTGAATGAGT ATATAACTTA TTTTCTTTTA GCCATTTCAG 000800 000801 GGAGCCTGTT TTCCATCACA TGGAAGATAA TTTCACAATA ATATGACTAT TCTTCTCTCA TAGCCATAAG ATGATGAAAA 000880 000881 TAAATCATTT AAAGTGCATT TTCTTACCTA GAAATGTCTT TTGTTTGGCA GAATGATTAA AATAACTGTC ACTTATTCAC 000960 000961 TTAGGAAAAT AAAAGTAGTT GAAGGGGAGA ATAACTTTAT AAAGTGATAT TTTCAGCAGC AAGGGTGGCC TCTTTTTCTT 001040 001041 CTCTTCAACA CAATTATTTC TAGTTAATTT TACTGAGGGA GGGAATTTCA TGAATTTTGT ACTCTGTATT TAGTGACCAA 001120 001121 TATGTTTCTC AAGGTGCTAA TTTTCTGTTA ATGAGCAATT GCTGTGGTTG GTTGGCATTA TAAACTGAAG TTTATAAACT 001200 001201 ACTTTAAAAA ATTAGTTAAA ATATCTGATT GTGATCCTAC CAGAAGGTAA CATTAGAAAC CTATTGAAAT GATCCGTAGC 001280 001281 TTTATTTTTT TTGTTAAGCA TAATTGTATT GCTTGATAAT ATGTACTAAT CATCAAGAGT CATAGTAAAC ATATAATCTA 001360 001361 CTCACCAACT GAAATCTTAT GGCTCAGGAA AATTTTTTGT TTTGTTTTAA TAAGCAGTTT CTTTGCAAAT TAAGATATTT 001440 001441 TTAAATTGTC GGGATAAATA TAATGGGGAC TATTCTCATA CATTCATACA TACTAAAAAC TGCTTTAGGC AATTTTTTGA 001520 001521 AAATATTTCC ACATTATATG CAAGCTTTGG AAAACAGGAA CCACCGCTAT AAGCATATCT GCTATGTTAG AACATGAAGC 001600 001601 AAAGGTTAAT TTCCAATTTA ATGTTTCCTC CCAGATGGAG CTTCTACCTA GCTTGTCATC AACATCTCCA TTTAGTGTGA 001680 001681 CCAAAATGAA TAGTGACCAA ATCAGAATTC TAGAGTTTAT AGAAATGTTG AGTTCATCCT CCAGCCTCTA AGCTGAAATG 001760 001761 TGGTTAATTC TCCCCTGGCC CAAGTCTCTC TCAATGTAAT GCTGTTCATT TCCCAAAGGT TTCTTCTTCT TCCCTTATAT 001840 001841 AAACATGACT GAAGCCTACA ATGATACACT GTAGGAGCAT CCCCACTGAT GCAATGTTGG AAGGAAGCAG AGATTGGCAC 001920 001921 CTTATATCCT TATTTTAATT ATTAGATTTT GGAGAAATCC CTATTCTGAG CTTCTCCACA AAAAGATCTC AGGTGCTTTT 002000 002001 CTTGCCTCGC AGCACCAATT CCTCTTCTGT TAATATCACA TATATTCACT TGAGGAAAAC TCTCCTCCCA GACATGATTT 002080 002081 AGGTGGAATT GCTCCGATTT CCACTTCCTT CACTTGAAAG GAAAACACAC ACACCAAGAC CTAAAAAACT AGTGCTTAAG 002160 002161 TGCTTGGCAG ACAAACCCAA ATTTGCAGGC TTCTAAGAGC TCACATTCTG GATCTGACCG CCCCAAGATC CTAGTTTACA 002240 002241 GGTAGTCATA TGTCACCTTC AGGATATTCG CCACAGCTAA ATACCACCTG TTCTGTAATT TACTTACTCT TTTTTCTCTA 002320 002321 ATTTGACTTT GTTAAGTAAA CTTTCTATTT TGAAATGATT TTAAATTGAC ATGCATTGGT AGGAAATAAT ATAGAGATGC 002400 002401 ATTTGTAGGA GATAATAACA TGCATTTGTA GGAAATAATA TAGAGATGTT TTTACCTGGT TTCCCTCAAT GGTAGCATCT 002480 002481 TGTAAAACTA TAGTACCACA TGCCAACGAG GATATTGACA TTAATACAGT CTACCAATCT TAGTTGGATT TTGCTGCTAC 002560 002561 CCAGTTTTAC ATGAGCTTTG GATACCAGAT ACATAGAATG ACATGTCCTC ATTTGCATC |
Predicted Small Protein
Name | NONHSAT114767_smProtein_1583:1750 |
Length | 56 |
Molecular weight | 6197.0069 |
Aromaticity | 0.0727272727273 |
Instability index | 61.6818181818 |
Isoelectric point | 4.69805908203 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.045977349899 |
Amino acid sequence | MLEHEAKVNFQFNVSSQMELLPSLSSTSPFSVTKMNSDQIRILEFIEMLSSSSSL |
Secondary structure | LLLLEEEEEEEEEELHHHHHLLLLLLLLLLEEEELLHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |