NONHSAT115603

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT115603

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3628 nt

Genomic location

chr6+:153304742..153308369

Exon number

1

Exons

153304742..153308369

Genome context

Sequence
000001 CGACCCTCCC CTTGACCCAC GCCTCTGCGC AGGCGCCTTG GCGGGCTGTG GCTGCGGAGT TGGCGGGTCG GCGCCTGCGC 000080
000081 ACTGGAGTCC CCCGCGATTT TTTCCTCCGG GGTGGGCGAG GAGGCTGTGC GGCCTTCCCC AGCGGCTGTA GCAGGAGACC 000160
000161 TGCGGCTGCA TCTCCCAGGG CCTTCCGGCG GGGCCGAGGG TAGGACCGAG GCACTTCTTC CTTGCAAGCG CGTTTATTTG 000240
000241 TATTTTCAAC CACACTTCAG ACGCTACTGG TTTATAGGAA CGTTAAGTTT ACTGAGTGTG CAGCTACGCT CCCCTGGGTT 000320
000321 TTTGTTCCTT TCCTTAAAGG GCCAGGTGTA GGAGACAGTA GTCCTGCTCC CAAAAAAAGA ATAAATAGAA GTGCCCGCCC 000400
000401 TCTTGGGCTG GACCCCCGTG GCCAAGGGAG TTTTTAGTGA TGGCTGGCAT GGACGTCAGT ATGAAAGTGT ACCGGAGTAT 000480
000481 TAGTGATGCT TAACTTTTCA CAATTTGAAT ATGCACTTAA GTAGGGCAGT GCATTCCCTG AACTCAGCTT TATGGCTACA 000560
000561 GCCCAGTGAA GCAACGGGAT GTGAACTCCA AAACGGCGAA TCCTCCTTTG CTGTTTCCCT CTGGTGCCTT TCTGCAGCCT 000640
000641 CGGAGTGAGT TCTTGGCTGT AGTCAGTTTT CAGTACCGTT AGTGACGAGT CCGGTGGGGC GCGGCCAGGA TTAGGATGAA 000720
000721 TCATACAAGT GCTGGGTGGA TCCTGTCTTT ACCTAAAATT TTGATAATTA GTTGTGGGGC GCGGCCAGGA TTAGGATGAA 000800
000801 TCATACAAGT GCTGGGTGga tcctgtcttt acctaaaatt ttgataatta gttcatcatg ggttttttgc ctttttcatt 000880
000881 tttaaaaatg ttaaaatagt gtcactcttg atgacttaaa tttttttcat ccccgtaaac gcacctgagg cctgtgcttc 000960
000961 cttgcctcac cctaacctgg ccctgGGgct agatcctgga gattcagggt tgaaaagaca aagtcctgtc ctttagggag 001040
001041 tttacagaga ccaatgggaa agaagttgac agtgaacaaT TTCAGAACAC GAAAGAGGAT ATGAAAGAAT GTAATCGGGG 001120
001121 GTAGAGAATG CAGATTAGTA TAGGTTAAGG ATTTTGGATG GTCAGGACGC TTTCTGAGGC TTTGAACCCA GATGCGTTGA 001200
001201 ACTGGCAATG CAGGGCTGCA TAATAAGCAG AGggaataat aagcagaggg aatgcctgac tacgacttag tgaacaagag 001280
001281 agagaggaga tgaggttaga gaggtaggca gaagccagat cctgtgggac cttgtagttt ttccatgcag agtttagact 001360
001361 ttcttctgat tgcagtggtt agctgttgga aggattttgg caaggtagtT ATTTGTTGAT AGAATATTGA AATTATAATA 001440
001441 GCTTTTTTAT GTAAAAAAAA GAATGTAAAT GTTAGCCTTT CATTCTCACA ATAGGTTAGC ATTATTTTCA GTGTACAATG 001520
001521 GTCGTGCTTC TCAGTGTGAG TTAATTCTCA CTGTGGCTAc caaaaccaca cagctagtaa gcggagattc gagtgcccgt 001600
001601 ctgcaggatt caaaaagtcc atgtcctttc ctcttatgct atgctagccT ATAACACTAT CTGCTGGAGT CCTGGTTGGT 001680
001681 TTTAGTACAT TTCACATTAC TTCACAGTTT GACCTTAGAG ATAATTGTAT TCACCTCTTC TATTTTCAGA TGCTGGCATA 001760
001761 AATACAAAAT TCGAAGCAGG CAAGGTTTCT CATTACATTA Gtttttattt gtattttttt gagactgagt ctcgctctgt 001840
001841 agcccaggct ggagtgcagt ggcgcgatct tggcccgctg cagtccctgc ctcctggttc aagcggttct cctgcctcag 001920
001921 cctcccaagt agctgggatt ataggcatgc gccaccacgc ctggctaatt tttatatttt tagtagagac ggggtttcac 002000
002001 ctttttgtcc aggctggtct tgaactcctg atctcaactg atccatccac ctcggcctcc caaagtgctg ggtggcatga 002080
002081 gccaccgagc ctggcTCATT AAATTAGCTG AGCATCTGGA ATATAACCTT TGGATCTTAT CCTCAGCTTA GATTTGTTCT 002160
002161 TCAGCAGTTT TTTTATTCTC TAGAAAAAGG CTGATATATT ATTGGAGAAA TCAAAATTTC TGTCATAATG TAATATAAAG 002240
002241 AACCAAGCAT GTTTTGTTGC ATGCTAGAAT AATTTGTTAG GTTTTTTTTT TCAGCTTATT GGGTTACTGC ATCATTGACA 002320
002321 TTAAATAATG TTTGAGCTTT AATTATTATA TTATTCATAA CTGTCGATAG GTTCAGTTCA CTGGCACCTG TTAAAATTCT 002400
002401 CATCTAAGTG AGAAAGTTAG GGCCACTCTg gcggggtgtg gtggctcatg cctgtaaccc cagcactttg ggagtcagag 002480
002481 gcaggaggat tgcttgagcc caggagtcaa catggtgaaa ccccatctct accaaaaaca aaaaaagcaa aaattagcca 002560
002561 ggcatggtgg tgcatacctg tagtcccagc tacttgggag gccgaggtgg gaggatggct tgagcccaga ggcagaggtt 002640
002641 gcagtgagct gagatcgcat cactgcactc cagcctggcg acCAAAAAAT AAAGGGCAAG GGGACATTCT GAATTTTACT 002720
002721 AGAAGCCAAT AGATGTATAC ACCTCATTTT TCAAATCAGC ATCAATCAGT TGTTGGGTGT TTAGGTGGAA CATGAAGTGC 002800
002801 AGAGAGAACT GCCCtcattc tttcgtaaaa ttcttatcgc agacctatca catgcaaaac aatgggatat atggaaataa 002880
002881 atgggacatg acacctgccc ttgtgcttat tatctgtggG CTTGCCACAT AATAGCCATA ATAGGTGTTC AGTAAATAAT 002960
002961 TTCTGAATAC CAATCAGGCA TATCTGTGGG GGTAAGGTGT ATAAAATAAA GCTATGTGGA ACACTGGATG AGTCAAATAC 003040
003041 ATTTAAATTT GTGGAAATTT Tggccgggac tggtggctca cacctgtaat cccagcactt ggaaggccta ggtgggcaga 003120
003121 tcacctgagg tcagaagttc aagaccagcc tggccaacat tgtgaaaccc catctctact aaaaatacaa aaaattggcc 003200
003201 aggcatgggg gcgggtgcct gtaatcccag ctacttggga ggctgaggca ggagaatcat ttgaacctag gaggcggagg 003280
003281 ttgcagtgag ccgagatcac gccattgcac tccagcctgg ccagcaagag tgaaactcca tgtcaaaaag aaaaaaaaaa 003360
003361 aTTGTGGAAA TTTTCATAGA AAAAAAGGAG TTACTTCTAT GTACCAGGAT AAGGGAATAA TCTGTAGGAc agggtttctt 003440
003441 aacctcagca catttttggc cagataattg ttgtaggatg tttagcagca tctcttttat tccatcttcc agttgtggta 003520
003521 actgtctcta aacgttgtca gatgtctcct gcgggggcaa aagaccctct ggatgagaac caTGGCTGTA GGGGATGTCT 003600
003601 TCTGAAGAAA TGGGCACAAA GGAGGCCT
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Predicted Small Protein

Name NONHSAT115603_smProtein_2447:2731
Length 95
Molecular weight 10455.784
Aromaticity 0.0744680851064
Instability index 68.8457446809
Isoelectric point 8.98675537109
Runs 11
Runs residual 0.0117946345976
Runs probability 0.0304555892791
Amino acid sequence MPVTPALWESEAGGLLEPRSQHGETPSLPKTKKAKISQAWWCIPVVPATWEAEVGGWLEP
RGRGCSELRSHHCTPAWRPKNKGQGDILNFTRSQ
Secondary structure LLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEELLLLLLEEEEELLEELL
LLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLL
PRMN -
PiMo -