NONHSAT118716

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118716

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2722 nt

Genomic location

chr7-:1468115..1479067

Exon number

3

Exons

1468115..1468427,1476378..1477244,1477526..1479067

Genome context

Sequence
000001 atctgtgtga tgcatgtgtg tgcaaccgtg ttcatgtatg tggtgcatgt acccatgtgt ggatctgttt catgaatgtg 000080
000081 atgcatgtgt gtccacgtgt gcacccgtgt tcgtgtgtga tgcgtgtgtg TGCACACACA TCTCTGTGTG TATTCCTAGC 000160
000161 ACTCATAGCT GCCCTGGATC CATATCCAGC TCTCGTGCCA CTTCCTGTGT GACCTTGAGC AGCCAGCAGC CCCGTGGGTT 000240
000241 AGCCCCCTGG GGAGACATGG CCAGGTTGGG CAGGACGTGG GTGTAGGGCT TGTGATGCCA ACCCTGTGCC AGTCGGGAGG 000320
000321 CCCAGGGCAT GGGGATGGCC GGGCTACCCA GCGAGCTGTT GGCTGTGCTG GGACAGACCC CAGGCTCCCA GTGGCCCTGC 000400
000401 TCTGAAGCGT GGCTCTGTCT CCCCACCTGG GGGCAGCCAG GTCCCCCTCC CCACCCCGCC GCAGGAGACT GGCCGTCCCT 000480
000481 GCCAGCCTCG ACGTTTGTGA CAACTGGCTT CGGCCGGAGC CCCCTGGCCA GGAAGCCCGA GTGCAGAGCT GGAAGGAGGA 000560
000561 GGAGAAGAAA CCTCACCTTC AGGGCAAACC AGGTCAGCCC CAGAGACACC GCTGCTGTTT GGGGTGTACG TGAAGGGAGC 000640
000641 CTTCCTCTGA GGAGGCAATG CCTGCTGGGG CTTTGGAGGA TGCATTCACA GGACCTAGAA TGGAGGGAAA GCCTGGAGGA 000720
000721 AGGACCCAGC CCCGTGCCCC AGGCCCGCCC TCATGAATAG AGACCCTAGC TGTTTCAGAG TACCTTGTTA CAGACTCATG 000800
000801 GTGATGATGG AATGTCTGCT TCTGGCAGCT TGAGGGACTG GGGTGGCTGG GGTGTTGCTG ACCTGGAGGA GGGCAGGGTG 000880
000881 CAGGGTGGGG CTGGGCCTGG AGGCCACTCA GGTGTCTGTG GGGCTGGGTC AGGGCAGTCC AGTGGGCGTG TGGGGCATTA 000960
000961 GGGAGGCAGG GCTGGGGCCA GCTGTGCTGT GCTGAGGTCA GGCTCCTTCC AAGCTGTGTC CTGGTCACGT TGGGCCTGGT 001040
001041 GGCCCAGGTC CCAGAGGCTC ACCCTGCTCC TTCTCCAGGG AGACCCTTGT CCCCGGCCAA TGTCCCTGCT CTGCCTGGCG 001120
001121 AGACGGTGAC CTCCCCAGTC AGGGTGAGTA GTGGTGGGGA GCCGGGCAGG GGCCCAGCCC TCCGGCATCC TCACCGCCCC 001200
001201 TCCGTTCCCA GCTGCACCCC GACTACCTCT CCCCGGAGGA GATACAGAGG CAGCTGCAGG ACATCGAGAG GCGGCTGGAC 001280
001281 GCCCTGGAGC TCCGCGGCGT GGAGCTGGAG AAGCGACTGC GGGCGGCCGA GGGAGGTGAG CGCCTCGGCC TGGCCCTGGG 001360
001361 CCAGCCCGAC TCCCACAGAC ACCCTCAGTC CTGGGGCTGG GGGCCATGAA CTCTGGCGGG CCCCCCTGCC CCAGCTGGCT 001440
001441 CCTCTCCCCA GATGACGCTG AGGATAGCCT CATGGTGGAC TGGTTCTGGC TCATTCACGA GAAGCAGCTT CTGCTGAGAC 001520
001521 AGGAGTCAGA GCTGATGTAC AAGTCCAAGG CCCAGCGTCT GGAGGAGCAG CAGCTGGACA TCGAGGGCGA GCTGCGCCGG 001600
001601 CTCATGGCCA AGCCCGGTGC GTCCCCCGCG CGCCAGCCAA GGGGCCCCAG CCAGGGATGC CGCGGAGCCC AGGATGTCTG 001680
001681 GGGGCCGGCT CTGTGAGGCC ACCTGACTGT CCTGGTGGTG AGACCTTccc tggagccagg cgagcccacg tttgagtttc 001760
001761 aaatctccca cctcctggct gtgtgtcctc agccaaggta cttaaccttg ctgtgcttgg gtttcatcct ctgcaaagtg 001840
001841 aggatgcttg tagcacccac ctcacgcagc tgttgtgagg attaaacgaa tcaattcgca caaggcattt agTGTAGCAG 001920
001921 CAGTCAGGGC GAGCCATAGG CATTTGTCTC GTGATGCAGG GTGCCCTGGC TGAGGGCACA GGCCCAGGCC GTCTGCCTCT 002000
002001 GCCCTTTCCT TGCTGTGCTG CAGGGACAGC GACGCCCTGA GCCTCAGTGT CCATATCTCT GCAGCGAGTG GTGTTTCTGC 002080
002081 GAGATGATGG GGAAGGATCC CAGCACACGG GCTCTGACGT GGCCGttcct tccttcattc acttattcac tcattcattc 002160
002161 TGCTCCGGAT CCCCCCAAGA CCCCACCTTC TTCCTCCAAA AGAGGAGCCT GGCGCTTGGG TGGTGGGGAC ATTGTGTCCT 002240
002241 GTGAGGGGCA TGGCAGTGGT GGGGGGGGCT CCTGCTGACG AGCCATCCCC ACAGAGGCTC TGAAGTCACT GCAGGAGCGG 002320
002321 CGGCGGGAGC AGGAGCTGCT GGAGCAGTAC GTGAGCACCG TGAACGACCG CAGTGACATC GTGGACTCGC TGGACGAGGA 002400
002401 CCGGCTCCGG TGTTTCCCCC CGGGCCGGCC TGCCGTGACG ATCACAGCCC TGCCGTCTCA GGTCACGGTT TTGGATTCTG 002480
002481 CGCTAACGAG GTCTCCCAGG TGGGCTGGAA ACACTGATGA AGACGGATAG AAAAAACACC AGCCCACCGG ATTATTAATA 002560
002561 AAGATAATCA CACACACCCC TTCGTCGGCA GCCGGCCTGA CACTTTATAA AGCACGTTAG GATATAATCC AATTGAAACT 002640
002641 GCAATATCGA GAACATCTCA TCTTATCACA AATTGAAATT ATATCACATT CCTCTTTTCT TAAATTAAAA AGCTAAAACC 002720
002721 TT
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Predicted Small Protein

Name NONHSAT118716_smProtein_71:211
Length 47
Molecular weight 4989.1345
Aromaticity 0.0434782608696
Instability index 40.6326086957
Isoelectric point 7.67852783203
Runs 7
Runs residual 0.00918737060041
Runs probability 0.056199056199
Amino acid sequence MNVMHVCPRVHPCSCVMRVCAHTSLCVFLALIAALDPYPALVPLPV
Secondary structure LLEEEELLLLLLLLLEEEELLLLHHHHHHHHHHHLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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