NONHSAT118857

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118857

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

3014 nt

Genomic location

chr7+:4029593..4032608

Exon number

1

Exons

4029593..4032608

Genome context

Sequence
000001 CTGTGCTGTC TGACTCCAGA GCCGGTGCTC ATGACGAGTG TCAGGCATCC GCAGAGGAGC CTTCGGAAGC AGAGTGTGCT 000080
000081 GTCCTGCACT ACAGCGGGGC TTCAGGGAGA GGCCACACTT GGGCGTTGGT CTGTGTGGAC GTGGAGGAAG CCACTCTGTG 000160
000161 AATCTGAAGA ACCATTATTT GAGTTCTGCA CCACGCAAAC CAGTTCACCG AGGGAAGGCC CAGAGGCAGT ATGTTATTCC 000240
000241 GGGTCTTGGG CTTCTAAGGT TACACCTTCC AGTCCTGGGC ACCACCTCGG AGTGAGGCCA GAGTCCAGGC CCTTCTCCCC 000320
000321 CTTGCAGGGG CATCTCTGAG GCCGGAGTCC AGGCCCTTCT TCCCCTGCGG GGGGCCTCTG CAACTCCCAC TCGGGCCTCT 000400
000401 TTCCTCCCAG AGATGGGGCA GGATAGAAAC CAGCGTGTGT GCAGACGGCC ATCTTAGCTT CCATTCAACG GCTCTGACCG 000480
000481 AACGGGGAAG GCCAGGGTGT TACTGATTCA GATAACTTCT GAGAGTACAG AAGAGTTTCC TGAGGATGGC GTGGCCATGC 000560
000561 TGCCTGTACG TAAAACAGGA CTTGACAGTG ATCTGGACGG AGAGAATGGG ACAGGGGAGA GCTCGTGTCA TCTGAATTCT 000640
000641 GGTTCGCATC CACCCTAAGG ACAGCTCCCA TCAGGCGCTG TCGCCTCGGG CTTCAGGACT GTGTCTCCTT TGTCTTCGTG 000720
000721 CTCCTCATTC CCTGCACTTA GTACGTACTC AGCAAATGAG GTGAAATTCA TCTCTCCAGT GGAGTCCTCT TGTGATGCAC 000800
000801 TGAAAATTAC AGTCATGGAC CGTCTTCCAA AACAGAGGCA TTCTACCTTC CCCCGTTTCC ATGAAAGAAG GCATGGCTTT 000880
000881 GAGATGCCTG GCCAGCGCTC TTCTCAGCTG ATGGCATGAC TGGCTCCTCC AGCCAGTTAG CTTGCCTCCA TGAGAAGCAG 000960
000961 GTTTCGTGTG TAACTATCCA GCCAGCCACC TACCTGTTAC AGCGGTGAAG CCAGCTGGGC ATCTGCTCTG CACTCTGCTG 001040
001041 GGTGCTGGGT GCAGAGCTGA CGTGATCAGT GTCCACTGCG AACAGCAAGG AGACAGTCAG AGGCATCGAT GCAGCCTCCA 001120
001121 CGTCGCACGT TCCCGGCTAG GTACGTACAT AGTGATGTGA CTGTATAGAA GGCAAGTCAG AGAAAGTCTT CAAAGAAGAT 001200
001201 GTGACATGAG ACCTGGGCCA GACGGGCGAC GAGGGACAGC ATCAGCAAGG ACCCCTCAGT GCCAGGCCCC CAGGCTCAGT 001280
001281 GGGAAACAAC TGCCCGTGAG ATGGGGCTGG GGCGTTGCTG GCGGCGTGTA TTGGTGTTAC CTGGGAAAGT TCTTCCTCCT 001360
001361 TTGGTGGCTT GGATCAAATA TCACTTCTGC AAGTCCCATT ACGCCCAGGC AGAAATGGCT TTTCCCTCCT CAGGGCTCCC 001440
001441 TTGCTGTTCT ACATGCTTCC CTTTGCGCAC CTGCGACGTA ACTCCTGGCT TGTGTCCATC TCCTGGCAAG ACTGGGAACC 001520
001521 CCTTCAGGGC AGGTGGGGTC CCTGTGTTGG TCCTCTGTGC TGTGACACCA GCACAGTGCC TGGCACACAC AAGATGGCTC 001600
001601 TGTAGGTGTC CAGCTGCTTA ATTTCACTCA GAAGGGGACA GAGAACGTCA GTCACCCATA TTAGCCTCTG GCTCTCCTGA 001680
001681 AGCTGGCCGA CGTTCCCAGC TGTCTTTCCT TCAGAGCCTG GAGTGTGGGT ATTGTGGCAT GCAGAATCTA GAGTGGGTAC 001760
001761 CATGGTTGCC TCCTGCCTGT TCTGATTTCC ACTGTGTGAA GGAAGCCCGT GACCTTGGCT GAAGCAGCCT GTGCTGCTAC 001840
001841 CAGCTGGTTG GTCCGTGTCT TCCTGCTGTG GCAAATAGGA AGAGTACCAC CATCATCTGG GCCAGTGGTC TGGTTTTTAT 001920
001921 TTTTATTAGC AACAAATGCC CTTAAGAAGC AGCTGAACAT GCTGGCTAAT TAGAGCCAGA AAGAACAGCT TAGCAGCAAG 002000
002001 TGCACTAAAA TGGAAATTGC ACTTGGCCTC CACTCAGCGT GTGCAAGTGG TCAGCACTAA ATAGCGCCAT CTACTAGGTC 002080
002081 TGTCCCTCCG GCTACTTGGG AGACACTCCA CAGCCAGCTC CTCCTGGCAG GCTGACTGGG ATGCCATTCT CCTGGAAGCC 002160
002161 GGGGATCCTG CAGGGGCCAA ACCCACATGG TTTAGTGGCC GAGGCAGGCA CTTGATAGCC TCTGCCCTGA CGACATTCCT 002240
002241 GCCACTGCAG AAGGGCCTCT TCCGAGCTCT GTGGAGCAGA GCCTGGGGCT TGAACTGAGC CTGCACCCAT GTACGGGACT 002320
002321 CAAGGTGCAT CTCTGGATGG GAGATACACG TGGCCCTCTG CAGGCATGCC AGGGTTTGCC TCTCTGAGAA GTTTGATGGT 002400
002401 TCTCCTGTCC CAGGTGCCTG TTTAGTAAGC CTGGGACTCA GAGAGGGGCA GTAGTGTCCT AGGCCTGGGT CAAGGCACCC 002480
002481 ACCTGGTGGA TTGAGGAGGG CAGAGGGTCA GGCCAGGTGG CGGATGAGGG AAGCCTGGGG GATCCCTGCA TTGAGAGAGT 002560
002561 GCAGGGATTC TTGATGGCTT GACAGTGGGG ACCCTGTGAC CAGGCTGAGA ATTCTGTTGA ATAATGAAAG CATTTGGCCC 002640
002641 ACTCTCTAAA ATGCTTATCG ATTATGATCA AAAATGATCT TTCTTTGAGA TTATTATGAT CCTGTGGAGG GAGACTGTCA 002720
002721 GGTAAGAATT GTGAAAGACT TTGCAGTGTG CCATAAAAAG GATTACTGAG TGTCTCATCT AGCGCCCTTC AGGGTTATCT 002800
002801 GATTCGATAG GGACCCGCGC TTTCCATCGT CTTTGGGCTA CTTATCTCTG TAAATTGTAG AAATCTTATA GTAGTGCACT 002880
002881 TTGAGTAATG CAAATTTCTT TTCCAAAGAA ATGCAAATAA ATGCAAATTT TATCCTGTAG AATATAAATA TGGCTATTGC 002960
002961 TCTGCAGATA CTGACCCGTT TTGCATCTAT TTATAAATTC ATTTTTGCAC TATC
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Predicted Small Protein

Name NONHSAT118857_smProtein_1205:1480
Length 92
Molecular weight 9936.4525
Aromaticity 0.120879120879
Instability index 53.0912087912
Isoelectric point 10.9349975586
Runs 10
Runs residual 0.0235805860806
Runs probability 0.0534622858153
Amino acid sequence MRPGPDGRRGTASARTPQCQAPRLSGKQLPVRWGWGVAGGVYWCYLGKFFLLWWLGSNIT
SASPITPRQKWLFPPQGSLAVLHASLCAPAT
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLEEEHHHHHHHHHHHHHLLLL
LLLLLLLLLEEEELLLLLHHHHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTo
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