NONHSAT118888

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118888

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2142 nt

Genomic location

chr7+:5013616..5037800

Exon number

5

Exons

5013616..5013792,5015932..5016067,5023302..5023404,5024541..5024706,5036241..5037800

Genome context

Sequence
000001 GTTAGTCGGG AGGGGGCGCT GTACGCGCGC TGTACGCTTG CGCGAGGTGA CGCCGGGGCA GGGCCGGAAG GAATGCAGCG 000080
000081 GCTGCCACGG AGCTCGTAGC TGCAGCTTTG GAGGAGTAAG CGGCGTGGTA GCGAAGGTCG CCGAACCCGC CTGGCTAGCC 000160
000161 GGCGAGTTGA GTGGCGACTC TTTTGAAACA GATGGTCACC ATGTTTAGAT ATTAGCAGTC CCGTATGTGC ATGTCTGCAT 000240
000241 TTGAAAATGG AAGAGGGAAA CAACAATGAA GAGGTAATTC ACTTGAACAA CTTTCACTGC CATCGGGGAC AAGACTTTGT 000320
000321 AATTTTCTTC TGGAAAACCC AGATTATCCA AAGAGAGAAG ACAGAATCAT TATAAATCCC AGTAGCAGTC TGCTGGCCAG 000400
000401 CCAAGATGAG ACAAAGTTGC CTAAAATAAG ACTTTTTTGA CTATTCTAAA TTGACTCCTC TTGACCAGCA CTGCTTCATC 000480
000481 CAAGCTGCTG ACCTCCTCAT GGCCGACTTC AAAGTGCTCA GTAGTCAGGA CATCATGTGG GCCCTGCACG AGCTCAAAGG 000560
000561 ACACTATGCA ATCACCCGAA AGGGGTTGGC ATCTGCACAT CCTTCCTGGG CATCTCGTGG GCACTGCTCG ATTACCACCA 000640
000641 GGCCTTGCAC ACCTGCCTCC CCTCCAAGCC CCTCCTGGGC CTGGGCTCCT CTGTGATCTA CGTCCTGTGG AACCTGCTGC 000720
000721 TACTGTGGCC CCGAGTCCTA GCTGTGGCCC TGTTCTCAGC CCTCTTCCCC AGTATGTAGC CCTGCATTTC CTGGGCCTGT 000800
000801 GGCTGGTACT GCTGCTCTGG GTTTGGCTTC AAGGCACAGA CTTCATGCTG GACCCCAGTT CCGAGTATCC TCTATTTCTC 000880
000881 CTGGTTCAAC GTGGCTGAGG GCCACACCCG AGGCCGGGCC ACCATCCACT TGGCTTTCCT CCTGAGTGAC AGCATTCTCC 000960
000961 TGGTGGCCAC CTGGGTGACT TACAGCTCCT GGCTGCCCAG CAGGATTCCA CTGCAGCTGT GGCTGCCTGT AGGAGGCGGA 001040
001041 TGCTTCTTTC TGGGCCTGGC TCTGTGGCTT GTGTGCTACT GCTGGCTGCA CCCTAGCTGA TGCTGGGAGC CCAACCCTGA 001120
001121 CCAGGTGGAC AGGACCCAGA GTCTACTTTC CTCAGAGGGG TATCAGCTGC CTCAGACCCA GTTAGCACAG AACTTTTTTC 001200
001201 CCAAGGGTAA GGCTGAGGCT GCTTCGCCAG TGAAGGGAGA GGTGAACGGC GTCCTTTGAA GCAGGATCAG ACCCAGCCAG 001280
001281 CAGAGATGGA GAGTGACTGC TGGCAGAAGG CAGGCGAGGA TAAGCTAACG ATGCTGCTGT GGCCTCCATG CACTCAGCAA 001360
001361 GAGTGGGATG CCTCTGCTGG GCCGTGCACC AGGGATGGTG CTGAGTGGGG CAGAGGCCTG CCTTCAAGGA GTTCACAGTG 001440
001441 AACAAGATGA GAAGGGCTGG GCCCTGCAGG GTCAAGAGCC CCAATTACGT ACAAGACACT TTGGGAGGAA AGACGACTAC 001520
001521 CTTTTCTTTT CCCCCTGCCA TTGGTATAGC TGGTGCCCCA AAACTTTCAC CTCCCTCCCT GGCCACCTCT AAAATGATTG 001600
001601 GTATAGGGGC TTCCCCACCC CTTAGCTCCC CTATCCTGGG CTAGAAGGCC ACAGGGACTG TCCTCTAGAA TTCTTCCTCC 001680
001681 CCTCCCCCAC ACCATTCATT CAATTCGTGA AACAAATCTT CACCGAGAGC AGTTTATGTG CTAGGAACAT CATTCTATCC 001760
001761 TTGCAACCTG GAACAAGACC AGCTACCACC TTAGCTTCAT CCCCTACTTG CACCAACCAG TCCCGGGTTA GATCTCAAAT 001840
001841 GCCGGAAGTC AGGGATGCCC AACTCTGGGC AGCCCCAGTC AGAACCTCTG GGATCTCAGT GAAGCTGGCC TGGCCTCTGC 001920
001921 TCTTGCTCTC AAGGGGCTGC TTTTCAACCA AGAGCCTTGT GAGCCTGGTC TGAGCCTTGC ACAGCCACTG AGTATTTTTT 002000
002001 ATTCCTTAGC CAGTGTACCT CCTACCTCAG AGTCTATGTG AGAGGAAGAG AATGTGTGTC CCTGTGGGTC TCTGCAAGTG 002080
002081 ACAGATGTGT TGTTTTTAAC AGTATTATTA GGTTATGATT AAAGCCTCAT GAAATCCTCT AA
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Predicted Small Protein

Name NONHSAT118888_smProtein_1367:1591
Length 75
Molecular weight 8402.4802
Aromaticity 0.121621621622
Instability index 68.327027027
Isoelectric point 6.88580322266
Runs 11
Runs residual 0.00599868160844
Runs probability 0.0485860191742
Amino acid sequence MPLLGRAPGMVLSGAEACLQGVHSEQDEKGWALQGQEPQLRTRHFGRKDDYLFFSPCHWY
SWCPKTFTSLPGHL
Secondary structure LLLLLLLLLLLLLHHHHHHHLLLLHHHHLLLLLLLLLLLLLHHHLLLLLLEEEELLLLLL
EELLLLLLLLLLLL
PRMN -
PiMo -