NONHSAT120038

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT120038

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2134 nt

Genomic location

chr7+:34255226..34300990

Exon number

5

Exons

34255226..34255375,34275672..34276546,34288522..34288977,34295539..34295973,34300772..34300990

Genome context

Sequence
000001 GAAAATAAGT CACAATACAT TCCTAGGGCC TTAGAGATTC GCGATTCTTT CCTCTGAGCT CTTTTTAGGC AATTTACCAG 000080
000081 GAGCGCATTT ACCAGAAATG CTTTCTCCTT GTAATCTGTC TTCCCATCTT CATGTAGAAC ATTCTACAGC GGGCCTGGGA 000160
000161 AGCTTATCCT TCATCAGCTT CTCAAGTCCT GTCTCCCAGT AGTCTGGTCC AGTGGGGCTG GGCTGATGGT TGCACTTAGC 000240
000241 AGCGGCTCCA GGGAATGCTG TGCAAATGAT CCAAGGAGCA AACTTTGGGA AACACCATGC TGCACCTTCT TTCCTGATCA 000320
000321 AGCTGATATG CATTCATATT TACTGTCCTG ATCAAGCTGA TATGCATTCA TATTTACTGT CCTGATCAAG CTGATATGTG 000400
000401 TTCATATTTA CTCACTGACA TGGAATTCAC AGCATCTAGA AGGGATTAGC CTGAGGATGA CCTTTTCACT ATCGGTGAAG 000480
000481 AAATACTTAG CTGAGTGCTA CAGAGCCTTT CTACTCAAGG TGGGACCTAT AGACCAACAG CCTTTTCTCA TCTGGAAGTT 000560
000561 CATCATGGAT GCTGAATCTC AGGTCCTACC CCAGACCTTC TGAATCAGGA TCTGCATCTT AACAAGACCC TCAGGTGGCA 000640
000641 CATGTGCTGA TTAAGGTGTA AGAAGCACAA CTGTAATGGC TGCAACATGG GTTTGGTGTA AGGCTGGTTT GAGTTTTTTT 000720
000721 TTTGTGTCAT AATTTATTAG TTGTACAAGC TGGGTTCAGT GGTGTCACCT TTCTGAGTAT CTCTTTTCTC ATCAGTGAAA 000800
000801 TGGAAATAAT AGAAACTGCA AGCACTGATT TACTCTTTAC ACCTTCATGG ATATATTGTC TAGGAGAATT CCTGACACAA 000880
000881 AATAGTGTTC AATAAATGTC AGCTTCTTAG TACTCTTTCT ACTTAATTAA GTAACAGTGT CCAAAATTTA CATGGGGAAT 000960
000961 ATGGATATTG CTTAGGAAAC CAGATTATTA TTTAAACACT GCAGGCAGAC AACTTAGGTA TAAAGAATTT GGAAGCTGAG 001040
001041 GCACAGAAAG CAAAAATAAT TTACTCAGGA CCACAATGCT GCTTAACAGC AGAAGCTAGA TGCCTATCCA TCATACCAAA 001120
001121 GTGCTTTGAA CATAAGTGTT GTCAAAATCC ATCTCTCCCA ATGGATCCTA AAAGATACGT TTTCATTTGT TTAGATGATG 001200
001201 AAGAGGAAAT TCATTCTTTT AAAAACTCTT TGTCATTTCT ATTTCCCCCT TTTATCTTAA GATGCTCCAG CTGCTTCCCA 001280
001281 TATTATGTTC CACCACTATG TTTTCCTTTT ATTTTAACAT GCACCACTTC AATTTCCGAA AACACAGTGT AATTTATCAA 001360
001361 TCAATAAATA AATCTGGACA GAAACACAAA GCACATTTTT CTCCAGGAGC ATTCCCTATT CACAAGCACA GGGAGAGGAA 001440
001441 ACTCAGTGGC ATCTTGAGCA AACATATGCA TCAATACACA CAGGCTTCAG AAAAGGAAGT CAGAGATACG AAGAATGAGA 001520
001521 GGGATTTGAT GCACAGTCAC TAGCTTGAAG ATTGGAGGGG CCATATGGCA GGTCTGCAGG TGTCCTCCAG GAGTTGAAAG 001600
001601 TATCCTCTTA CTGACAGTGG CATGGAAATA GTGACCTCAG TCTTACAACC ACGGGGAACT GAATTTTGTC AACAACAAGA 001680
001681 ATGGGTTTAT AAGCAGATTT TTACCCAACC TCCCCGCCAA GACAAGAACT AAGCTCAGAT GACAACTTGA TTTCAACCTA 001760
001761 TGAAACCCCA AGCAGAAAAC TCAGCCACAC TGTGTCATTC TGACCTAGAG GACTAAGAAC AAGTTCACCA TTCAATTGAA 001840
001841 GTAATTTGTT ACATGGCAAG AGCAGACCAA CATGAATACC ATCTATGTGC TGATGACTTA AATGTGTATA TTTAGAAAGG 001920
001921 AAGTCTGGGG CATCTAGTCG TGTGATGAGA GGATGCCTGC CTTTGAAACT GAGCACGTCT GTGGGTCTTT GAATCCTTTT 002000
002001 CTCTGAACAG GTCGTAGTTG GGCAGATGGC ACAGCCAGCA TGCCTCCATG ACTTGCCAAC CACATTTCTC ATGGACCCCT 002080
002081 TTGTTGGACC TGAATGTGTT CAAATATTCG GGGCTTCTGT AGTCACCCTT TCAT
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Predicted Small Protein

Name NONHSAT120038_smProtein_1160:1351
Length 64
Molecular weight 7363.5042
Aromaticity 0.174603174603
Instability index 80.5587301587
Isoelectric point 4.69989013672
Runs 11
Runs residual 0.0296404275996
Runs probability 0.0529299352829
Amino acid sequence MDPKRYVFICLDDEEEIHSFKNSLSFLFPPFILRCSSCFPYYVPPLCFPFILTCTTSISE
NTV
Secondary structure LLLLEEEEEELLLHHHHHHHLLLLLLLLLLEEEEELLLLLLLLLLLLLLEEEEELLEEEE
LLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL
LLL
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