NONHSAT120102
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT120102 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2657 nt |
Genomic location |
chr7-:35837887..35840543 |
Exon number |
1 |
Exons |
35837887..35840543 |
Genome context |
|
Sequence |
000001 TTCATTGGCG TCAGCAACGT TTTGCTGTTC GGGTTTAGCC GCCATGTTTA AGTTGGCCGG GTTTCGCACC ACTGAGGTCA 000080
000081 TGGATACTCA GGCCTCTTTG CGTGTTTCTT CAACACTGCT TCTAAGGTTA ACCGCGTTAC ATTTGTTGGA GAAAATCCTG 000160 000161 GGAACGCTGA AAAGGACTAG TGGGTGGGGT GCGAGGGTGG GGTCTTGCCC GAATTAAAGA TGGCCGCAGT CAGCTCTGCC 000240 000241 CCGCGCAATT TCACGTCAAG TTTTGGAGCT GCGGGAGCCG GCCAGTTGGC CTCAGCGCCT CCTTACGGAA TTGGCGTAAG 000320 000321 GCAAAGAGGC GCGGCTGGAA GAACCAGACT GAGAAAGTGC CACAGGGCGG GGGCCGCATC CGCCCCTCGG CTTCTGGTTA 000400 000401 CTGACCCGAC GGCTTTGTGA GTGAAAGTGA AGAGACACTT CGAGGCAGGT GTCTGTGCTC CCCATTCATC CCTGTTTCCG 000480 000481 TGGCTATCTT GACTTTCGGG GTGAAAAGTG AGGTTAGGCC CTGTTTCCCC GACCCTTCCC TCGCGCCATC ACACTCTAGT 000560 000561 GGCCTGGCAC AGCCCCAGAG GTCGGCCGCT GTAGCCCCCA TTGCGGACTC GCCACATTCA TATTGGCTCA CCTTGTCGGT 000640 000641 Gcccggttcg gtcctcttgg agctcacact ccagttgagg aaaTGAATGG ACACAGGAAC TACTGGGTAA CAAAATACTA 000720 000721 ATAAAGGGCT GCGATTGTGT GAGTTTCTAC TGTAGCGATG AATGTCGCTG TCATTGGAAC GTTCCCCAAG TGCCTTCTAG 000800 000801 TGAAAGCCTT ACTTCACTCG GAATAACCTG TGGTCTTTTC TTGAACGTGA TGGCTCTCTT GGTTGTATTC TTCATGCACA 000880 000881 TGTGTTACTT TTCCTGTTTA ACTACATGTT AAAGAAATGT GTATGTTCCT GTTTAACTGC ATGTTTTAAA AAAGTATGTG 000960 000961 TATTTTTAAG TTATaggcac gtgcaagaaa gttcagagca aaatagctta tattagtgaa acaataaatg tctactaata 001040 001041 ggagaatgga tgaataagtg tcattgttga acaaattgac atacaacacg aaccaaaaaa tcagtgaact aaagctacca 001120 001121 tttttcatat ggatagagtc attaacctaa tattgaggaa gaaatgaaaa gacaggttgc ggaaagatat atatgacata 001200 001201 ccataaataa aagtttaata attacaaaaa agtaagatca aactaaaaat tgtataagga aatgatagat accaaattca 001280 001281 gaatactggt tgcttccaga gatgaacaga agggaatgta acaagaaggg ttcatttgta tctataacgt ttgttttcta 001360 001361 ccagaaatat cttgaaaatg tggcaaaaca ttaagctaag tagagggcac atgggtgttc acttgtaatt atttccttta 001440 001441 ctgttctata tacttgaaat atttccaAGT AATTTTTTTT AAGAAAAGAA ACTTATAGAA GCAACTTATT TTGTATCTTG 001520 001521 ATATATGCCA TTTCGTAAGT CTACATTTTT ACTGAACTGC TTATGAAGTC TGTTGCAACT TATCTGTTCA ATCATTGTTT 001600 001601 TAAGTTTCTG AAACTTCAAA TGAACTTTTA CTTTGGGAAA TTTTGTTGAA TTTCTATTTT TGAAAAAAAG cagtgtacca 001680 001681 aggagggtaa atgtatatag cctccggagt cagactgcct gagttcaaat cccagctctc catttattag gcttgcaacc 001760 001761 aagaacaagt tacttaaact ttcctgtgat ccagtttcct catctataaa cggagataat acttatctaa caggattttg 001840 001841 ataagagtta aatagactaa tacatgaaca cggtgcttag tcaatgctta gtaaatatta cctaaatata gattattTTA 001920 001921 AAATATAAAA TTAAAGCAAA TACTTATATT AATATAACCT AATAGTCTAA AGGAAGTAAA TCTTTGCCTC CCATCTCTAT 002000 002001 TGATAATATT TCTTTGAGGA AGATCTCTTA ATGGGTATGA AAGAGGTGAA TTGTGTTATT TTGTGCTATG AAAATGGATA 002080 002081 AATTCTTAAT AGAAACTATA TTAAATTCCT TGTCTGAAGT TTGTTCATGT TCACCCCACA CTATGATAGC TTCACTACTT 002160 002161 TTCATTGAAA ATCACACAGA GTggccgggc gcggtggctc acgcctgtaa tcccagcact ttgggaggcc gaggcaggca 002240 002241 gatcgcctga ggtcaggagt tcgagaccag cctggctaac atggtgaaac cccgcatcta ctaaaaatac aaaaaattag 002320 002321 ccgggtgtgg tggcggtacc tgtaattcct gctactcggg agactgaggc aggagaatca cttgaaccca ggaggcggag 002400 002401 gttacagtga gcccagatag caccactgca ctccagcctg ggcaacaaga gcgaaattcc gtctcaaaaa aaaaaaagaa 002480 002481 aaaaTTATAC GGAGTGTTAC AGGCAATGAA ATAATGATAT TCTGAGGAAC TTTCTTTGTA GGGAGGTTTC ATAGCCAATG 002560 002561 TTCTATAATG TATATACATG TGTTATGCAA ATTATACGTG GTGCACGAGG AAAGAGAATT GTATTGATCT TATGATCTCT 002640 002641 TTATTGCACT TATTTGC |
Predicted Small Protein
Name | NONHSAT120102_smProtein_905:1015 |
Length | 37 |
Molecular weight | 4176.9457 |
Aromaticity | 0.111111111111 |
Instability index | 50.6555555556 |
Isoelectric point | 8.72003173828 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.0426249779191 |
Amino acid sequence | MLKKCVCSCLTACFKKVCVFLSYRHVQESSEQNSLY |
Secondary structure | LHHHHHHHHHHHHHLEEEEEEEEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |