NONHSAT120362
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120362 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2463 nt |
Genomic location |
chr7+:44250307..44253891 |
Exon number |
2 |
Exons |
44250307..44250723,44251846..44253891 |
Genome context |
|
Sequence |
000001 atataaatgt gtgtgtatat atatatatGA GTTTTCCTGG AGTGCTGGTT ATCTAAGCCT GTGCTGGGGA CAGCTTTTTG 000080
000081 GGAAGTCTGC TACATCCCAG TTAGATCTTC TAGATTTCAC GGGAATGTCA CCAGGTTCTG TTCCATCCAC TTGGACAGTA 000160 000161 ACTATTCTTG GACCGAGTCT CGACACCTAG AGGTGAAGTT TGTGTGTGTT GGAGAGGAAC CCAGGTAAGG CACTTTCCCC 000240 000241 CATGACTGAA ATATGAGGGG CTCATGTCAG GGCACGTACT GAACAGAGCT GGATTCTCTT TTCTTTTTTG TCCAGCACAA 000320 000321 CACCATGGAG TCTCTGTTAG AGCGAGGTGA GAAGCTAGAT GACTTGGTGT CCAAATCCGA GGTGCTGGGA ACACAGTCTA 000400 000401 AAGCCTTCTA TAAAACTGCC CGGAAACAAA ACTCATGCTG TGCCATCATG TGATGCAGCC TGCCAGAGGC CCAATGCTGG 000480 000481 AATGGCACCA TCATTCACAT CAGAACTGCA GCCCCTGGAA AAGAAGAGAC AGCCATAGAC GAGGAGCCAG AGTGGGGGCA 000560 000561 GACTGGCCAT TTTTATTTTG AAGTTCCTGC GAGAAATGGA TGGTGGAAGG GTGGCGAATG TTCAAATTCA TATGTGTGGT 000640 000641 AGTGATTCTT GGAAAGAATT TGAGGTCCCC AAAGGTGTAT TTTTGGGCAA ATGAAACCAT AAACTCCGAC TGGCTTCTGT 000720 000721 AGATGCCAAA GGGCTCTTTT TCAGCTAACC CTGGGAAGGC TCTGTGGGAG GGAGGTCGGA GCCAGCTGTT TCTCGATCTT 000800 000801 TGGTATATCT TTGGATCTTA TTTGTACATT AATGATATTA ACACTCCAGT GGGGGGTGGG GAGTCCCTGA TGCTAGGGCT 000880 000881 GGGGTGGGTG GAGTTTGAAG ACTCTTGGGA AAGCCTCTCC TGGGGCCACT GTTGGGGGTG GGAGTGAGCC CACCACAGAG 000960 000961 GCCACAGGCA GGCCCCCACT TCAGGCCCAA GGCCTGGGGC GGGGGGAACA GTCACTGGGT CTCAGATTCT GAGACTGTTG 001040 001041 TTTAGCTTAC CTTTCTGCTA GGATTGGCTT CCCGCAGAGG GCAGGGCCCA TCCTAAGCAG CTTCCAAGTC CCACAAAGGT 001120 001121 GGCTTGTGGG AGGATTTGGA AGGAGCTGCA TTGTGGGCGG GGAGTGTGTG GGTTGGGTTC GTACCAGCAA GTAGACTAGG 001200 001201 AACTGAGCCC AGGAAAGGGG GATGTTTTCC TGGTGTTTGG ATGGTCAGCT GGGAGTGTCC ATCATCAGGG GAAGATCAAA 001280 001281 CACAGGTGCA CTCAGCTGCC CAGGGCCTCT GGGACACTTG CCTTGACTTG CAACTTGCCT TGAACATCAC GATCAAAGCA 001360 001361 GCAGGTGCTG TGGTCTCTCA AAATTGATTT TTATTTGACT CTGTGGCTCT AAGACTGCCT TGAACCGCCT GAGGCCTATG 001440 001441 CATCTGAACA AGTGGGTCTC TCCCTTGAGC ACCAGGAGTG GGTGCCAGCC GGCCCCGAGG ATTCCCAGCA CCCCACCTAT 001520 001521 GGTCTTGCCA GCATAGGCTT GCTAGTTCCT TCTTGGTCAG AGGTAGCTGC AGAGGGGGGA GGCCAAGGGT TTGGTCTAAG 001600 001601 CTGTGCCCTG CCACCTGGCA GGAGGCCCAC TCACTGCCCA AGTCATGGCA ACAGGCTGGA GCAGCCCAGG AGATGGGCCT 001680 001681 AAAATGTTCT GGATCCCTTG GGTCCTAGTG TTATGTTCCA GTCTGCCCAC CTGTGCTCAG GATGCAGCCC TGGGATCCAG 001760 001761 CACCCATGGA AGCTTCTGCT GGGATGGTGT CACCTATGGG TTTTGAACCA GTGTGGTATG GTCCTTGGGA GCTCTGCTCT 001840 001841 GAGCTTGCCA CACTGCTGAG AGCACCCACT GTCCTGACCA GAGTCTCAGT GGTCCTGACC CCCAATGTGG GCAGGGGCTG 001920 001921 GGCAGGAGGG TGGGGTCTGC TGTGGGTTCA GAGGACTCCA CCTCCTGGCT GGTTTACCTG CTGCTGCCCA TTTTCTCTGG 002000 002001 GTACTGCTGG CCAGAGGACT TTAGCCTACC CCTGAAGAGC CTGTCCATGT CATTTTCCTA CTGCCATAGA TACCCTAAGC 002080 002081 CCAGGGCCCC TTGAGGCCCA GACTCAGCCT GCCCACTGGT GCCGGAGACG GAGTGGAGTG GGCCTGGATC CGAGGGATGC 002160 002161 TACCTCTCCC TTTCCCACTT GAGGACCCTG GGGAGAGATG GGGGCGGGGA AAATGGAGGT ATGAATTTGG GGTAAGAGGA 002240 002241 AGTGAGATCT CCGCTTGCAG GTCAGCCCCT GCCTTGCAGG GCGGGCTGGC TTGACTCAGG CCCTGTGAGA TAGAGGGCCC 002320 002321 AGCCCAGCCC CACCCACAGA TCCCCTGCTC CTGTTGTGTT CTGTTGTAAA TCATTTGGCG AGACTGTATT TTAGTAACTG 002400 002401 CTGCCTAACT TCCCTGTGTT CTATTTGAGA GGCGCCTGTC TGGATAAAGT TGTCTTGAAA TTT |
Predicted Small Protein
Name | NONHSAT120362_smProtein_722:946 |
Length | 75 |
Molecular weight | 8377.2796 |
Aromaticity | 0.189189189189 |
Instability index | 45.3472972973 |
Isoelectric point | 4.35650634766 |
Runs | 14 |
Runs residual | 0.046539222149 |
Runs probability | 0.0491142402908 |
Amino acid sequence | MPKGSFSANPGKALWEGGRSQLFLDLWYIFGSYLYINDINTPVGGGESLMLGLGWVEFED SWESLSWGHCWGWE |
Secondary structure | LLLLLLLLLLHHHHHLLLLLHHHHHHHHHHLLEEEEELLLLLLLLHHHHEELLLEEEEEE LLLLLLLLEELLLL |
PRMN | - |
PiMo | - |