NONHSAT123130
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT123130 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
4975 nt |
Genomic location |
chr7-:126787075..126792049 |
Exon number |
1 |
Exons |
126787075..126792049 |
Genome context |
|
Sequence |
000001 CAAGTGAGAA ATCGTAAGTA ACTTTAAAGG GGACTAGGAA CATCTAATAT TAACTTCTTT TTTTAATCTA CAGAATTAAA 000080
000081 GGCTTTGGAA TGCAAAAGAG AAACCTACAA AACCTCAGAA TATAGACTAT AATCTACATT CAGTAGTTCC AAGAGAAGAA 000160 000161 AAGTGTAACA TCTAGCTTTC TAACAAGCTC TCAAGGCACA TAATATCTCT TCTTTAGATT TGTATTCTGT AAAGTACAAG 000240 000241 TCCCTAGGCC TTTTATCATA CGGAAGAGAT TTTTCTCTGA GATTCTCTGT AAATACACAG GTTCAACTTT TGATACATCT 000320 000321 CTGTGTATTT CTTAAAATCC CAGTAGAAAG CCGTAAACTC AGGGGCTCAA GAACTCTGTG AGGACGATAA TGATAATGAA 000400 000401 AGGCAGATGT TGCAGCGTGA CTGAACAGCA TCCCGATCGC CTCCTATGTG AACTGTAGAA AACGTTGTTG ATGATCCCCT 000480 000481 TAATTTGACA TGGCTTTTCA CAACCATCCA TAATTGGGTT TTGGGGTGTT TTTTCTTTTA TGACACAAAC AGATCTTTGG 000560 000561 AAGAAATAAG AGGTCCTTAG ATAAGAAATG GTAGAAATCC GAGGAAGATC CATGGAAGAG ATAAGTTGCT TTTTGCTAGT 000640 000641 GGGAGATTTG CTGGAGGTGG TTGGTCTGTA TGGTCAAGAA CCACAAGAAC CCTTAGGTGG TTGAGTTTAT TGAAGTGTGT 000720 000721 CATGTGATTT TCTCTATGGA GGTCAAGGCT GGAGAAGGAT CTGGAATAGC ATAACCTGTG AGGACTAAAA ACATACCCTC 000800 000801 TAGGCCAGGT GGAGAGACTT TTGGAGTATA GAGTCTCCAG TGCTGTCCTA AGGAGGCCTG ACCTCCTACA GAGTCCTTGT 000880 000881 GTACCAAGGA GCCAGGCAGC CACACACTTA GCGATGCCAG CATATGTTGT TCCCCAAGGA AGGAAAGTGC TTCATTTCTG 000960 000961 CTAAAACCCA ATGTGTATAG CTAAAACCTG TTGTTCTGCT AAAACCTGAT GGGTACAAAC TGCAAAAAAC AAAAAAACAA 001040 001041 CAACCTTCTT AAGACAGCAT TTCATAGACT CACCATGATA GCAATCTTGT TTTTGAGGCA GGGCTTACCT ACTTCAGATA 001120 001121 CAGGTGTGTA CTAACATCTG GAGGGTTTCT CTAATTCTGG GCTTTATGAA GCCAACCCAA GGGTCAGCTG AGAATGGTGG 001200 001201 GCCCACACTG TGTAATAAGA CCCATACAGA CTCTACTCTC CTTGAACAGA AGGAGGCAGT AGAGCATAGA GGTTGAGGAC 001280 001281 AGAACTGGGA GTGGGATTCA TTTTGAATCC CATGCCATCA CTTTAAGTGG TGTGTTTGGG ATGTGACTTT TACAGTCTTT 001360 001361 CTGTTTTTTT CAGTTGTCCC GTCTGCAAAA TGGGAATAAT AACACTTATG GTCTATTATA GTCGTTGTCA ATGAGGTAGG 001440 001441 TAGAGTGCTT AGTGTAGCAC TGGGCACCAC CAACACTGAG TGCAAAAGAG AGCCAGTAGG GCTTTGATTT AAATTTCCAG 001520 001521 TTTTTCCCCA TTAAGACTTT GGACAGCCTG ATGCCTTTGT CTTCTTTTCT GGTCAGGTTC TGGTGGCTCC TGGCTTCTAC 001600 001601 AGAGCCCTCC TGCATGTCCA TGTGCTCCTG TTCCACTGTC TTGAGAACAG CCACTGGTTT CAGTGACCAG CCTCCTTTTG 001680 001681 AAGTCCCTGC CATTGCAATG CCTCTGCTGT CAAATACCAA TTCATTAGCA ATTGTTTTCC AGGAGGCAGA ATTTTTCTTT 001760 001761 CATATGAGCC CTCCATTCTA TGCCTGTCTT CTTTCCTGTT TCATTGAGGC AAGGGAAATA GAATTTTATT TATTTATAAA 001840 001841 ATAAATTGTA TTGTATATAT TCAAGGTATA AAACATGTTA AGGGATACAT GTGGATAGTA AAAAGGTTAC TATAGTGAAG 001920 001921 CAAATTAATG TATCCATTAT CTCACATAGT TACCCTTTGT TTTTGTGGTG AGAGCACTCA TTTAGCATGA ATCTCATATA 002000 002001 GAGTACAATT TTATTACCTA TGACCTTCAT GTTGTACATT AGATCTCTAG ACTTCTTCAT TCTACATACC TGCTATTTTG 002080 002081 TATCCTCTGA CATACATTTC TTCATTCCCC CACCCTGACC CCATAACCAC TGTTTTGTTC TCTATCTCTG ATTTTTTAGA 002160 002161 TTCCACATGT GAGGTCATGT GATTTTTTTC CCCCGTGTCT GCCTTATTTC ACTTAGCCCT CTAGTCCCAT CCATGTCGTG 002240 002241 GCAAGTAGAA TCTTGTTCTT TTTAAGACTG AACAATATTC CATTGTATAT TTGTACCACG GTTTCTTAAG CCATCTGTCC 002320 002321 ATTAGCTGAC ACTTAGGTTG TTTCCCTGTC TTGGCTGTTG GGAATAATGC TGCAATGAAC ATGGGAGTGC AGATGTCTTT 002400 002401 ACAAAGTGGT GATTTTATTT CCCTTGGGTA TATGCCCAGA AGAGGGATTG TTAGGTCATA TGGTAGCTCT ATTTTTGATT 002480 002481 TCTTTAGAAA CCTCCATATT CTTTTCCATA ATGGCTATAC CAGTCTGCAT TCCCATCAAT AGTGTATGAG TTCCCTTTTT 002560 002561 CCATACCTTT GCCCACATTG GTTGTCTTCT GACTTTTTGA TAATAACCAT TCTAATGGGT GTGAAGTGGT ATATCATGGT 002640 002641 GGTTTTGATT TTCATTTCTC TTATGACTAA TGGTATTGAG TATCTTTTCA TCTATCTATT GGCCATTTTT ATGTCTTCTT 002720 002721 TGGAGAATGT CTATTGAGGT CTTTTTAAAA TTGAGTTATT TGTTTTCTAC TATTAATATA TGAATTCTTT ATACATTTTA 002800 002801 GATATTAACT CCTTATCAGA TATATAGTTT GCAGTATTTT TTTTCCCAAT CTATAGGCTG TCATTTCATT TTGTTGATTG 002880 002881 TTTTCTTTGC TGTACAGAAG CTTTTTAGTT TGATGTAGTC TCATTTATTT TTGTTTTTGT GGCCTGACCT TTTCATGTGA 002960 002961 TATCCAAAAA GTCATCAAGG CCAATGTCCA TGAGCTGTTG CTCCTTCTCT TCTAGAAGTT TTATAGTTTC TGGTCTTATG 003040 003041 TTTAGGTCTT TTATTTAGAG TTGATTTTTG TGTGTGGTGT AAGATAAAGG TCTGATTTCA TTCTTTTCCA TGTGGAAATC 003120 003121 CAGTTTTCCC TGCACCATTT GTTGAAGACT CACCTTTCTC CATTGTTTTC CCTTGGTGCC CTTGACAAAA ATTACTATGC 003200 003201 TGTGTTTGCA TTGTCATTTG TCCTAAGTTA TTTTTAAGTT TTCCTTTTGC TTTCTTCTTT GACCCATTGG TTGTTTAGGA 003280 003281 GCATGTTATT TAATTTCCAC ATATTAGTGA ATTTTCCAAG ATTCTTCCTG TTACTGATTT CTAGTTTCAT ACCACTGTGG 003360 003361 CCTGAAACAA TACTGTATAT GAGTACAGTA TTCTTAAATT TGTTAAGATT GTTTCGTGGC CTAACATATG GTCTATCCTG 003440 003441 GAGAATGTTC TATGTGTGTT GAAGAAAAAT GTGCATGTAT TATACTGCTG TTGGACAGAA ATTTTTGTCT ATGTCTCCTA 003520 003521 GGCCCATTTG GTCAAAAGTG CTATTCAAGT CCAGTATTTC CTTATTATTT TTTTTTTTTG CTTCATCTAT CTATTGTTGA 003600 003601 AAGTGGGGTA TTGAAGTCCC CTATGATCAT TGTATTGCTA TCTATTTCCC CGTGTCCATT ATTTGCTTTA TGTATTTAGG 003680 003681 TGCTCTGGTG TGGGGTGCAT ATATATTTAC AATAGCCATG TCCTCTTGAT GAATTGATCC CTTAAACTTC TTTAGTGGAA 003760 003761 AAGTTGCTTT CTAATTGGTG GATTGGATTG GGCAGAAGTA GAGATACCTG AATCGACTCT GTTGCACCCA TTTAAGAGAT 003840 003841 ATTCCTTGTA GAATATTTCA TGCCTAGTAT GGGGAAGGTC AAGGCTTCTC AAACTTTATC ATGTCTACAA ATCACTGGAG 003920 003921 GCATCTTGTT AAAATACAGA ATCTGATTCA GTGGGTCTAA GGTGGGACCT GAGACTCTGT ATCTTCAACA AGTTTCCAGA 004000 004001 TGATGCTGGT TCAATGGCAA GGGGATGGGC CACATTAATG TGTTGAAGAG TTGAGTTCGA AGATGGGCAA TAGTAGATAG 004080 004081 GTTATCTTTT CAAACAACAA AGCTTACCGT GCTCTTCTAT ACTAATTTTT ATTTATTTAA CTCATTTTAA AGCTGCATTT 004160 004161 GAGGCATCAA TAATTTTACA AAGCTCTAAT ATTCTTTCTC TGGGTAAACA ACATAAAAAC ATGGTAAAGT CTTGACATAT 004240 004241 AAGTGTAAAA GGATTCAGGC ATTATAGATG AAAGGAGAAA ACAGCAAAAT TGGGTTGCAT TAGTTACATT GGTTAATTCT 004320 004321 GAAAAGCTTC TAAAAAGAGG TGTTTTGAAC CCAGCTTGAA AGATATGGCA AATGTGGATT AGAGGATATT AGAAATATAC 004400 004401 TAAGTTAGTA TACTTGTACA GGGCAGAAGG TGGAATTAAG CCTTAGGGAC AGCTGAAGCA AGGTGAGTGG GGGGATAGGA 004480 004481 GGGAATTTGC CCAAAGCAGA GACCAAGAGA AAACTGCAGC TTATTAGTAG TTAGCAGAGA AGTACCCAGC CAAGCTTGCA 004560 004561 GAGAGCATTA CGAAAGGGTT TAACAATATG TATTAGGAAA CAAGGTCCTT TAAGGTAAAC TTGAGCTTCC CACTCTCTAT 004640 004641 CAGTGGGGCC TGTCAGAGGA CCCTCATCCA CAGCAGTAGG AAGCATTTTT ACTTTCTGTA CTTTGGCCGG AACATGTTTA 004720 004721 CTTTCAGCTT TGCTTGGTTT GGTGGTGGGG TTCAGACTTC TTGGGAAACA TTGATTAGCT CTCTGAGGCT TTCTGTGGCT 004800 004801 GCCCAACTTT CATTCATTGG ACCATTCTTT TGTAAATTCA ATATTGTTGA ATCTAGTGCC TCTATGTCTA CTGAACCTCA 004880 004881 TGCTAAAGGT GTGATAATTG CATATTTGCA GTTAAATAGC AATAGCAATA ATAGCACACA CAAATATACC ATCTAACTTA 004960 004961 CGGAGAGATG CTTTC |
Predicted Small Protein
Name | NONHSAT123130_smProtein_1550:1843 |
Length | 98 |
Molecular weight | 11051.8681 |
Aromaticity | 0.164948453608 |
Instability index | 94.747628866 |
Isoelectric point | 4.63507080078 |
Runs | 14 |
Runs residual | 0.0127911416571 |
Runs probability | 0.0186678274914 |
Amino acid sequence | MPLSSFLVRFWWLLASTEPSCMSMCSCSTVLRTATGFSDQPPFEVPAIAMPLLSNTNSLA IVFQEAEFFFHMSPPFYACLLSCFIEAREIEFYLFIK |
Secondary structure | LLLHHHHHHHHHHHHLLLLLLLLLLLHHHHEELLLLLLLLLLLLLLHHHLHHHLLLLHHH HHHHHHHHHHHLLLHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |