NONHSAT127292
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127292 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2358 nt |
Genomic location |
chr8+:75360429..75362783 |
Exon number |
1 |
Exons |
75360429..75362783 |
Genome context |
|
Sequence |
000001 ATTCTGTCAT ATGGATTTGT TTTTCATGTT TATGAATTTC ACTAAACAGA TATATAGTAT GTCCTTTTTA TGTCTTTTCA 000080
000081 TTTGCTCCAC GTAATATTTT TAAGGTTTGC TCATGTTGTT GTGTGTTTTA GTAGTTCATT CCTTTTTATT GCTGAAGAGT 000160 000161 TTTGTTATAT GAATATGCCA CAATTTGCTA TCTGGTCTCC TGTTGACAGA CATTTGGACA TTAGTTTTGG TAGTTTTGAA 000240 000241 AGAAAGCTGT GATGCATGTT CTTTTTTTGG ACATGTATTT TCATTTCTCT TTGATATTTA CAATGAAACT AACAATAATT 000320 000321 TTGTAAAGTG TTTTACCAGT GTACACTCTC CCTAGTAGTG AATGAGTGTT CTAGTTGCTC CATGTCCTCA CTAACATTTT 000400 000401 ATTGTTGTTC GTTTTACTGT TGTTAGCCAA TCTAGTGGAT GTAAAATGTT ATCTAATTGT GGTTTTACTT GGCCTTTCCC 000480 000481 TGATGACTTT CCTTGATTTT GAGAACCTTT TCATGTGCTT ATTGGCCTTT TGAATGTCAC ATACAATGTG GTCTTTCATG 000560 000561 TCCTGACTTA TTTTAAGAAT TACGTAGTCT GTTAGTTGAT TGTAGGAGTT TTTTGGTCAG ATATATGCAT TACAAGTATT 000640 000641 TTCTCTCAAT GTGTGGGGCT TTTCATATAT TTAATTATGG CTTTTGATTA TTAGACATTT TAATTTTATG AAGTCCAAAT 000720 000721 TAGCAATTAA AAAGTGTTCA GTGCTAATTT GCTTACTGTG TTACTGTATT GTTTTCCTCT AGAAGTTTTA TAGTTTTTAT 000800 000801 TTTTACATTT AGGCAACTTC AAGTAAGTTT TGTGTATGGT GTGAAGGAGG CTCCAAGGTT TAATTTTTTC TATGTATTTA 000880 000881 TCTGGGTCTT CCAGTATCTT TTATTAAAAA ACCTTTCCTC CCCAGTGAAT AATCTTAACA TTTTTGTCAA AAATCTATTG 000960 000961 ACTATATATG TTTGAATCTG TTTCTGGGTT GTGTTCTATT TTATTGATCT ATTTGCTTAT ATTTATGATC CTAATTCACC 001040 001041 GTGTTGATTA CTATAGCTGA AAAGTAACTC TAAAAATCAA AGTTGAATCA ACTTTGTTAT TCTTTTTCAT GATTGTTTTG 001120 001121 ACATACAAGC TCTTCTGTGT TTAAATATAA TTCTCATTGT CAGTTTATAT TTGAAAACCT CTTTAGATTT TGATAGGAGT 001200 001201 TACATTGAAT TTATAGATCA ATTTGGGAAG AACTATCTTA ACAATACTGA CTCTTCAAAT TCATGAACAT GGTATATATC 001280 001281 TTCATTTATT TAGGTCTTAG ATTTTTCTAA ACAGTGTTTT GTAGTTTTTA GTTCAGAGAA TTTGCATATC TTTGTTAAAT 001360 001361 TTATTCCCAA GTATTTTATG TTTTTTATGT TATTAAATTT TGTTATAAAT GTAATTGCTC ACAAATTTTA TTTTTCAATA 001440 001441 TGGCACAGTA TTGGTAAGTG TATCCTGCAA CTTTACTAAG CTCATATATT AATTATAGTC ACTGTTTTTG TATTTTTATG 001520 001521 TGCAGAATCA TGTCATCTGT GAATAAGGGC AGTTTTTGGC CTATTTTAAT TAGTTTGACT TTTTTTGTTT TCTTTCCTTA 001600 001601 TTGCTTTGTT AAAATTTCAA GTAGAATGTT GTAAAATTTC TTTAAGTTTC TGGTTTGCCA AGAGTTTAAT TTTAAATAAT 001680 001681 AAATGAGTGT TAAATGGTTT TGTCTGCATC TTTTAGGTGA TCATATGGTT TTCTGCTTTA TTCTGTGAGT AAATGAATGA 001760 001761 AAACAATTTT AGAAATTTCT ACTTTTCAGA TGTAGAAATA AAAAATGATA CATTCCCATT AAAATACTAC TTTAGCTGGA 001840 001841 TCCAGAAAAT GGATATGTTG TGTTTTATCA TTATTCAGTT TGAAATATTT CCTTTGTTTT TTTTTTTCAT GGTTTATTTA 001920 001921 TATGTGTCTT GTTCAATTTC CACATATTCG GTTTAAATAT ATATTTTATT ATTGACTTCC CATTTAATTC CACTGTTGTT 002000 002001 AGATAACGTG TTCTGTAAGA TTTTAATCTT TGGGCATTTA TTAAGATGTA TTACATTTAT TACCTAAGAT ATAGTCCATC 002080 002081 TTTGTGAGCA TCTGATAAGC ACTCAAAAAT AATGTGTATA TTTTGGAGAT GTAGTTTTAA TGTTCTATAA ATGTTAGATA 002160 002161 AAGATCATTT ATAGTATTGT TGAAGTGGTT TATATATCTA CTGATTTTTT TTCTAGGTGA TCTATCAATT ACTGAAGGAG 002240 002241 ATGTATTAAA ATATTCAATT CTGAATGTGA TCTTTTTTGT CCCTTGAGGT CTGTTAATTT TTGTTTTATG GATTTGAATG 002320 002321 ACTGTATATT AGATGTATTA AATGCATATT AGACACAT |
Predicted Small Protein
Name | NONHSAT127292_smProtein_1517:1633 |
Length | 39 |
Molecular weight | 4497.4792 |
Aromaticity | 0.210526315789 |
Instability index | 50.8947368421 |
Isoelectric point | 9.84613037109 |
Runs | 10 |
Runs residual | 0.0905470914127 |
Runs probability | 0.0487811340753 |
Amino acid sequence | MCRIMSSVNKGSFWPILISLTFFVFFPYCFVKISSRML |
Secondary structure | LEEEEELLLLLLLHHHHEEELEEEEELLEEEEEEEELL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTTiiiiii |