NONHSAT133450
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133450 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2138 nt |
Genomic location |
chr9+:99631182..99634510 |
Exon number |
2 |
Exons |
99631182..99631344,99632536..99634510 |
Genome context |
|
Sequence |
000001 GCTTGAGTTG GGAAACCAGT TCTCCCACTT CATTAATAAT GATGTCGATG TTCCTGGCAG TGTTTATACC AAATGCTACT 000080
000081 TTGACCTTTG CGCCTTGGCA CACGACAGTA GCCTATATTT GCCATTTTGT CTTCTTGACA TAGAAAGAGC ATGGGAACTG 000160 000161 AAGGTTGTTT CAAGGTTGGA AGACAAAGAC TTCTATGGTA CTGCCAACAA AAGGAAAAGG TCTTTGAGTT CTGATGATTT 000240 000241 AATTGATCTT CAGTGCCTTA AGGCCATCCT CTCCTGAAGG AAGAAGTGAG GGGTTATATA ACATCTGAAC CCCTCATCAA 000320 000321 AAAAGACAGG AAAATATCAC CTTTCCTGCT GAAGAACTAG AAAAGTACTT TCAAAAGAAG AAACACCTAC AATTCAAGTT 000400 000401 AACTCAAGGA CAACTAGGAT TGCACTTCAT AGAAAAGAAT GGGACCTTGT CAATGCAACA ACACACTCTT ACACTCTTCT 000480 000481 GTCCCTTTTA ATGTAAAGAG AGTTATAAAA ACCACTCCAA AGTGAAGGCT CCTATGTGAG CTGATAGCAG TGAACTATGT 000560 000561 AAGGGTTTAA AACAATGGTT TAAATTTTTA GATTTTAAAG ATAACTTTTC TGTTTCTTTT ATATTTTTCT TTCCCCCAAT 000640 000641 ATTGCTGCAT ATGCATTTAG CATCATATTA CCATTAAAAC ATAGGACTCT TAACAACTCA TAAAGCCACT AGGAGCAGAT 000720 000721 GCAGCATTGT CAGGTACTGA AGGGGCTCTT CCTTCCTACT CTTAGAATCG AAGCTACTAG TTACTGGCAA TCATTTTAAG 000800 000801 CAAAAGCTTC TGGATAACAT TTGCCATTCA TATCCTCTGT AAGCACTTCT TATTAGCAGT TAGCATGTTT GGGGTCATAA 000880 000881 AAAGAGAAAA TATTGGTTAT TGATTATCTA CTTTTATTAG GGTCTGTGGT GTATTTCTTG TGAACTATAA TGGTTCTCAT 000960 000961 TTGCTGATAA ATTTTCTTAT TTTTTAAATA AAGGTATTAA AAGATGTTTT CATAGTGCCA AGCAACATGG TGATCCAGTG 001040 001041 GTAATAAAAA ATGATAAAAC ATGAGGTGTC CTGAAAGTTT CAGGACAGTT TTTAGCTTTA ACATAGTATG CTTGTGCCCT 001120 001121 CCAGAGCACT GAAGCATACA TATGCAGGCT ATAAACCTTT ACAAAATATA ATTTGAAATT TTAATTGTAT TTCTTCTTTT 001200 001201 TTTTTTTAAA TAGATGTTGT CTCAGTATGT TACCCAATGT ACAGTGCAAT GATTATTCAG AGGCACAGTC ATAGCATACC 001280 001281 ACAGCCTGGA AATCCTGGCC TCAAGCAATC CTCCCATGTC AGCCTACCAA GCAGCTGGGA CTATAGGTGT GTACCACCAC 001360 001361 CTCTGGCTTC ATTTTGCAGA ATTTGAATAT TAAGCATTTA ACTTTTTGTC TCATCAATAT CTGCTATCGT CAAGAAGGAC 001440 001441 TGAAACAAAA AATTAAAGGT TAATATTCAG GAGCTAGGCA TGCCTGTAGT CCCAGCTACT CATAAGGCTT AAATGGCAGG 001520 001521 ATCACTTGAG GCCTAGCATT GGAGGCTGCA GTGCGCTGTG ATTGTGCCTG GAAATAGCCA TTGCACTCCA GCCTTGGCAA 001600 001601 CATACTGAGA CCCTGTCACT CTAAAAAATG GCAAAACTAA ATAAAGGTAA AAGAAATATA ACAAACCTTT CAGTGATGCT 001680 001681 TTGTAAATAT TTGTAGCATT GATACTTCTA CAAGTATCAA AGCTTAAAAT TACACTAAGC CTTTTGGAAT TGTTGTATTT 001760 001761 TTATAAAGTG CCCTTTTCTC TTTTGAAGTA GTTCTTTGCA GGGCTTTCAT CTGCATTGAT CACCCAAAAT TATTTTCTCT 001840 001841 AGATGTGATA CAGAATAGGA TCAGTTTTAA TGCACATGTA ACAAATTTGA AGGAACTGGA CCTTAATAGT AGTAGATGAT 001920 001921 CTAATACATT TTATTATCCC GCATGTTAAC CTGGAGGCAG GTATCATATT TTATGTCCAT AAACCTTAGG AACCTTACCT 002000 002001 CCTAAAAAAA TTATCATTTA TGGAGTGCAG AGCTTAGAGA TTGAAGTATT GACTGCAGTT TTATTTTCAA AAGGTAAATG 002080 002081 CTACAATTTA TGTGGTTTTT ATTTCTCATG TTTACATTAA AAGAAAACCT AATAAACT |
Predicted Small Protein
Name | NONHSAT133450_smProtein_38:142 |
Length | 35 |
Molecular weight | 3922.6993 |
Aromaticity | 0.205882352941 |
Instability index | 40.6676470588 |
Isoelectric point | 6.68389892578 |
Runs | 6 |
Runs residual | 0.00967982129561 |
Runs probability | 0.0377877877879 |
Amino acid sequence | MMSMFLAVFIPNATLTFAPWHTTVAYICHFVFLT |
Secondary structure | LLLHHHHHLLLLLLLLLLLLHHHHHHHHHHEELL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiii |