NONHSAT139101
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139101 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
2409 nt |
Genomic location |
chrX+:153059904..153063948 |
Exon number |
6 |
Exons |
153059904..153060040,153060129..153060209,153061118..153062987,153063180..153063269,153063526..153063591,153063784..153063948 |
Genome context |
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Sequence |
000001 GATTCACGCC CCCTTCCGGC GCCTAGAGCA CCGCTGCCGC CATGTTGAGG GGGGGACCGC GACCAGCTGG GCCCCTGGCT 000080
000081 CAGGGAGGGG CCACGTCAGT GCTGCCAGAG ACGTCACAAT GCCGGCCCAG CCGTTCGGCA GAGAAGAGGC GATGGCGGCG 000160 000161 ATGGCATCTC TCGGCGCCCT GGCGCTGCTC CTGCTGTCCA GCCTCTCCCG CTGCTCAGGG ATCTGCCTCC TGTGGTCCAG 000240 000241 ACCCAGAGCC TTCTCTGACG TCCTCTGCTG AAGCCATCGT TCTGCCAGGG CACCACATTT GGACAGCGGG TGGCTGAGAA 000320 000321 CATTCCCACT TTGGGGAGCC TTTGTTTCAC ACCCTCTGAT GTAGGCGGCA GCCTTCCTTT CCTTTGGGCC TCTGGTTATG 000400 000401 GAGAAGGCTA AGGCAAGGTC CTTTCTCTCA CAGCTAACAA GTTGTGCTTC TGGAACCAGA GTCTCTCCCG TTTACTTCTT 000480 000481 CAGGAAACGC TGGGGCCAGT CTTCACCTTC TGTCAACTGG CCGGGGGCAG AGACCCTTTC TCTCATCTTG AAAGCCCCAG 000560 000561 TGCATTGCCT GCCTGCAGCC CCCACCCCCG ATGTCTCTGC TGAGGATGCC TTCAGTAACT CGTCCAGGCC GTTTGTGGCT 000640 000641 CTGAATTGAG GCTGGCGTGG CCCCCGGGCC TCCGTGTCAT AGGTCCAAGT GTTGGCATGT ATTGTCCAGT GAATCCAGCC 000720 000721 CCCACCTGTC CCCAGTTCGC TCTTCCTGCA CACCTCCAGA AAGCCGGCCT TGCCCCTCCC CAGCCTTCCT TCACAGCCAT 000800 000801 CCCGCCTACG TTGCCATTGC ATTTGTGACC GAGCACTTGG ATCTGTCTCG CATATCCCAC CTGGAAGGGG CAGGAAGAGC 000880 000881 GCATGGGTCC CCAGCTGATC CGTGCTATGA GGCAGGGCCG GGCCATCCTG CCCTCAGACC GGGATACTCG AGCTGGCCTT 000960 000961 ACCCAGGCAT CTCTCCCTCT TCCCCGCAGC CGAGGCCTGC CTGGAGCCCC AGATCACCCC TTCCTACTAC ACCACTTCTG 001040 001041 ACGCTGTCAT TTCCACTGAG ACCGTCTTCA TTGTGGAGAT CTCCCTGACA TGCAAGAACA GGGTCCAGGT GAGACAGTGG 001120 001121 GGTTTCAGAC AGGAGGGCGG GTGGGGGGTG CTCCTCACTG CTAGTTGATG GGGGACCTGT GTCGATAGAG GGAGAATCAA 001200 001201 GATTCCAACT CTTGGGGTGC CGGAGAGATC AGGGCACGGT GATGCCAGAT CCTAGCCAGT GTTGACAGGT CACCTTCCTC 001280 001281 ACCTGCTTTG TGTGCTGTGC CTACACGAGG TAACCCTGGG CTCACCACCC GCTGTTTCCT GAATGAGTAT CTGGACCGGG 001360 001361 AGAAAGGGCC AGGAGTCAGC CCACCCCGGT TGCCATTGGC CAGTTTGTCT GTGTGGGTGt tttgtttttg tttttgtttt 001440 001441 ttgtttgttt ttttgagata gggtctcact ctgttgcctc agctggagtg cattggcacg atcttggctc actgcagcct 001520 001521 ccacctcccg ggttcaagcg attctcctct cagtctccta agtagctggg atgacaggtg ctcgccacca tgcccagcta 001600 001601 agttCCCATA AGTCCAAAGA AGGAAATGGG GCCTTTTTTG GGTATGGCCC TCTTAGGGTA AAGCACCCCT TGGGCAGCCC 001680 001681 ACTGGGCACC CCTGACCCCA GCACCTCCCT TGTAGACTCA GGAAATCACT CAGCCCTTTT GATCATCCCG CCCCTGCTCA 001760 001761 CAGTCAACAG GGTTCCTATG CGTCCAGTTA GGCCCGGCCA TGGGGATCTG GCCTTGTGCC CCCGTAGGGA AGACCAATGC 001840 001841 AGAGGGCCAG TCACGGGATT GGTGAGTGTT ACTTGGTACC TCCTGCCAGG GACACTGCAG CCCCCAACTG GGCCTAGCCT 001920 001921 GCCCACCTGC AGGCCGTGTG AGCAGCGCAC AGGGCTCCTC TGCCCACACC CAGAGGGGGC AGAAGGTGAC CCTGCCTTTG 002000 002001 TTCCCTCACC CAGAACATGG CTCTCTATGC TGACGTCGGT GGAAAACAAT TCCCTGTCAC TCGAGGCCAG GATGTGGGGC 002080 002081 GTTATCAGGT GTCCTGGAGC CTGGACCACA AGAGCGCCCA CGCAGGCACC TATGAGGTTA GATTCTTCGA CGAGGAGTCC 002160 002161 TACAGCCTCC TCAGGAAGGC TCAGAGGAAT AACGAGGACA TTTCCATCAT CCCGCCTCTG TTTACAGTCA GCGTGGACCA 002240 002241 TCGGGGCACT TGGAACGGGC CCTGGGTGTC CACTGAGGTG CTGGCTGCGG CGATCGGCCT TGTGATCTAC TACTTGGCCT 002320 002321 TCAGTGCGAA GAGCCACATC CAGGCCTGAG GGCGGCACCC CAGCCCTGCC CTTGCTTCCT TCAATAAACA TCACAGGACC 002400 002401 TGGGACTGC |
Predicted Small Protein
Name | NONHSAT139101_smProtein_41:316 |
Length | 92 |
Molecular weight | 9512.6541 |
Aromaticity | 0.043956043956 |
Instability index | 97.4021978022 |
Isoelectric point | 9.47589111328 |
Runs | 9 |
Runs residual | 0.0345695970696 |
Runs probability | 0.0185774009303 |
Amino acid sequence | MLRGGPRPAGPLAQGGATSVLPETSQCRPSRSAEKRRWRRWHLSAPWRCSCCPASPAAQG SASCGPDPEPSLTSSAEAIVLPGHHIWTAGG |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLLEELLLLLLLLLL LLLLLLLLLLLLLLLLEEEELLLLEEELLLL |
PRMN | - |
PiMo | - |