NONHSAT143497

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT143497

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2398 nt

Genomic location

chr16+:71671738..71676017

Exon number

2

Exons

71671738..71673236,71675119..71676017

Genome context

Sequence
000001 TCCATTTGTA CATTATTTTA TTTTTAGAGT ATTTTCACAT ACTTGCTTTT TTGTTGTTGT TGTTAACTTC CCACAGTATC 000080
000081 ACACGGTTGC tttcatttga gcctccccac atccctgtgg gtgaagattg gcagacttag cttcatttgt catattgtct 000160
000161 gaggcttaga aggactgaat ggcttggcca agatgacaag gcagtaaaaa gcggggactt gaacctggtg gtcctgctct 000240
000241 cggttcaTTT GTATTTCTCT TCATGCTCAT CCCTGAACAC CACGGGAATG GCAGGAGACC CTCTCCCAGA AGGACACCTA 000320
000321 AGAAGGATTT GGGGCCTCTG TCAGTAACAA ATAAAAGCTG ACCTCGGACA AGAAGATCTT CAGTCTGTTG GCCTGTTGGC 000400
000401 TTCCTCTGCC TCGTGCCATT TGTGGGTTCC TTTcagtcca aatatctatc agtaaggtcc tggttgaata gacaaatcca 000480
000481 tccatacaat gaagtcgaag gccacttaac aaaatgtggc tcctcttgta ggaactgatc tgaaaacatc tggaagatac 000560
000561 agtaaatgaa aaaatcaaga tgcagaacag tgtacatggt acacttactt ttgtggaaaa atgcagggaa gggaatgaaa 000640
000641 tgcagattta aatgtgcttt ttatttgcat aaaggaacac tggacaatta tattgaaacc aatgaaagcg gttGGCAACA 000720
000721 TTGAAGAGAC GGTATGAGTG AAATTTCTCA GTTTATATCT TATGTCATTT CAAtttttta gaaacttttc gttttgaaat 000800
000801 atagatttgc aagaagtcac aaaaacagtg cagagtactc ctgtgtatcc ttaacccagt tttctccaat gataatatac 000880
000881 tgcataacta gtacaatatc aagaccagga aagtcacaat ctacagagct catttaggtt tccccctttt acctgcacac 000960
000961 atatgtatgt gtttgtagtt ctaagccgtt ttatctcatg tgtagatttg tgtgagcagc accatgatgc aatccagaac 001040
001041 tgttccctca ccctggacat ccctgtgcta agtcttcata gtcacatcca tcttcttcct tcctccccca tccctactca 001120
001121 ttcctgtccc ctgttgatca ccaatctggg cttctctata attttgtcct tttgagactg ttacatacat gaaatcacac 001200
001201 ggtatgtaac tttttcagac tggttctttt tttttttttt tttttttttt ttttgagaca gagtttcact cttgtcgccc 001280
001281 aggctagaat acaatggcgc aatctcggct cattgcaacc tctgccttcc gggttcaagt aattctcatg cctcagcctt 001360
001361 ccaagtgggt gggattacag gcgcctgcca ccacacctgg ctaattttgt atttttagta gagctggggt ttcaccacgt 001440
001441 tgtccaggct ggtcatgaac tcctgacctc aggtgatctg cccgcctcgg cctcccaaag ctgaggtggg cggatcgctt 001520
001521 gaggtcagca gattgagtcc agcctggctc acatagcgaa accctgtctc tactaaaaat acaaaaaatc gccgggcatg 001600
001601 gtggctcacg cctgtaatcc cagcacttta ggaggccaag gcaggcagat cacctgaggt caggtgtttg aaaccagtct 001680
001681 ggcaaacatg gtgaaacccc atctctacta aaaatacaaa aattagctgg gcgtggtggc aggcacctgt aattccagct 001760
001761 actctggagg ctgaggcagg agaatctctt aaacccggga ggcagaggtt gcagtgagcc aagaccattg cactccagcc 001840
001841 tgggcaacaa gagcgagact ccgtctcaaa aaaatacaaa aaatcatctg ggcttggtgg tgaacgcctg taatcccagt 001920
001921 tactcaggag gctaaaccac aagaatcact tgaacctggg aggcagaggt tgcagtgagc aaactccact ccacgtcact 002000
002001 gcactccagc ctgggtaaca gagcgaggct ctgtctcaaa aacaacaact acaacaaaaa aGATAGGACA GTAGATTTTA 002080
002081 TTAGACCCTG AAGCATACTG GAGGCTTTTT CATTTCTGCA TTCCCTGACA GTGCTCCATA GAGTAGGTCT TCAAAGGTAG 002160
002161 ATAGTAATCT CATTACCCTG GACTGTTCTC ATAATGTAAC AGATCACTAA CACTGAATCT TAAAAATAAA GTTCTTTTAG 002240
002241 TAATTTTAAT CTTACGTGTT TTATACCTAT TCTTATACTT TACAGCTTGC CCCAAATATA TTAGTTCAAA TCAGATGCAA 002320
002321 CTAGAAATAT ACATTCTCGT TATGGTCTTT TTGCTAATTG TCCTCTTGCT TTTTAGTAGT GAATTCTTAT GGAACCTG
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Predicted Small Protein

Name NONHSAT143497_smProtein_962:1174
Length 71
Molecular weight 7798.1095
Aromaticity 0.0714285714286
Instability index 52.2771428571
Isoelectric point 5.97369384766
Runs 15
Runs residual 0.0694483734088
Runs probability 0.0407348524995
Amino acid sequence MYVFVVLSRFISCVDLCEQHHDAIQNCSLTLDIPVLSLHSHIHLLPSSPIPTHSCPLLIT
NLGFSIILSF
Secondary structure LEEEEEEELEEELHHHHHHHHHHHHLLLLLLLLLEEEELLLEEELLLLLLLLLLLLHHHH
LLLLEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHH
HHHHHHHHHH
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooTTTTTTTT
TTTTTTTTTT