NONHSAT143691
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT143691 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2165 nt |
Genomic location |
chr16+:74468703..74470867 |
Exon number |
1 |
Exons |
74468703..74470867 |
Genome context |
|
Sequence |
000001 ggtgcatgcc accacaccct gctaattttt tgcagtttta atagagatgg ggtttcaccg tgttagccag gatggtctct 000080
000081 atctcctgac ctcgtgatcc ccctgcctca gcctcccaaa gtgctgggat tacaggcgtg agccactgtg cccggccGCT 000160 000161 AGAAtttaat ttttatcaga tatataaata ctagtttgaa gtcaagtaat actacaaagc ttataatgat gaacagcagc 000240 000241 tccctgactc accaaaccct tgcaattctc aatcctcagg agtaataact ctcaactctt agagctcttt cttatggtaa 000320 000321 ttaactatta attcatgctc atactgttat tttattggtt ttcaggtttc agatattctc cactaactag gaagatgatt 000400 000401 ttgctttcag accacacaga cactcatcgc ccctcttgcc acccatcctt taaatttgat tgttttttcc ttctggggtt 000480 000481 caatcaatat tcattgttta cattgtttta attatgcaaa tatcactact tgaggcatac cacatactct aattacattt 000560 000561 ctgttagttt tcctttaact gaaaacgtct taatttcacc ttcattcttg aatgatatat ttggtggata tagaattttg 000640 000641 agctgacagt tcttttcttt caacccctaa tgatgttcta ctggcctcta tgatttctga tgagaagtcc aagtcattca 000720 000721 aatccttgtc tgccttaaat ttgttgtttt ctctgttttc aagattttct cagtttgctt tttttttttt tttttttgag 000800 000801 acagagtctc gctctgtcac ccaggctgga atgcagtgct gagatcttgg ctcactgcaa cctctgcctc ttgggctcaa 000880 000881 gcaattctct ggcctcagcc tccctagtag ctaggattac aggcacctgc caccatgcct ggctaagttt tgtattttta 000960 000961 gtagagacag ggtttcacca tcttggccag gatggtcttg aactcctgac ctcaggtgat ccaccagcct cggtctccca 001040 001041 aagtgctggg attacaggtg tgagccactg cgcccagact attttgcatt tttaatagtt tgatcatgag gtgcttaggc 001120 001121 atagttctct tcaaatttat tttgtttggg gcttattgag tatatttatt tatttatgag atggagtctc actctgtcac 001200 001201 ccaggctgga gtacagtggc atgatctcgg ctcacttgca acctccacct cctgggttca agcaattctc gtgccttggc 001280 001281 ctcccaagta gctgggacta caggcatgca ccaccatttt tttgtggcta atttttgtat tcttagtaga gatggggttt 001360 001361 caccatgttg accaggctgg tcttgaactc ctgatctcaa gtgacctgcc tgcctcggcc tctcaaagtg ctgggattac 001440 001441 aggcgtgagc cactgcgtct gaccttattg agctttaatc tgtaaactta tttactaaag ttgggatgtt ttcagttatt 001520 001521 atttctttaa atatttttct tccatgttgt ctttcctatc aatttttttc tgtccttcag atttcattat ttctattatc 001600 001601 caacttcatc ttcactcact cttttgttgg tttttaaaaa attttttttt ctattttttt cttttttcac tgacttttct 001680 001681 ttttcaattc tgttttacta gtaagctcat tgctctggtt ttaatgtgtc ccccaaaatt catgcattga tacttaatgg 001760 001761 acaatgtgat ggtattaaga attggggcct ttagtaggca attaagtcat aaggttggag ccctcatgga tggggttagg 001840 001841 gtccttaata aaagatcttg caggagtggg ctcattctct tctgctcttc caccacgtga ggacatagca ttcattcctt 001920 001921 ctggaggata cagcaaaaag ataccatctc agaaacagag agcagcccat agcagacacc aaacctgcct tgatcttgga 002000 002001 cttcccagtc ttcagaactg tgagaaataa atttctatta tttatgcatc acccaatttc agttattttg ttatagcagc 002080 002081 tcaaatagaa taagacaccc atctagtgat tatttttttt tttggagaca gagtctcact cttgttgccc aggctagggt 002160 002161 gtagt |
Predicted Small Protein
Name | NONHSAT143691_smProtein_1829:2029 |
Length | 67 |
Molecular weight | 7008.9711 |
Aromaticity | 0.0454545454545 |
Instability index | 46.3742424242 |
Isoelectric point | 9.18377685547 |
Runs | 7 |
Runs residual | 0.0445472690982 |
Runs probability | 0.0339793575088 |
Amino acid sequence | MGLGSLIKDLAGVGSFSSALPPREDIAFIPSGGYSKKIPSQKQRAAHSRHQTCLDLGLPS LQNCEK |
Secondary structure | LLLHHHHHHHHLLLLLLLLLLLLLLEEEELLLLLLLLLLHHHHHHHHLLLLLLLLLLLLL LLLLLL |
PRMN |