NONHSAT144642

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT144642

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3062 nt

Genomic location

chr16-:90167614..90172550

Exon number

2

Exons

90167614..90170485,90172361..90172550

Genome context

Sequence
000001 aaaaaaaaat tagccgggag tggtggcggg cgcctatagt tccagctact cgggacgctg aggcaggaga atcgcttgaa 000080
000081 cccgggaggg ggaggtttca gggagccTCC TCTAAACAGA AAAGACTGAC CCCCAGTCAG TGTTTTATTT TCCCTGATGA 000160
000161 CCGCAGGCCA TGAACTTATG GAACAATAAG GAATGCCCAA TTCAGATGCT GCAGAGAAGA GCATGAGAAC CGGGTGTCTT 000240
000241 CAGGACAGGT GTGCATCTGG GAGCAGAGTG GGCATTCATC AGCAGGGAGG AGCAAGGCCT GGGTCGGGGG ACACTGGGGC 000320
000321 TGCTGTCCCA GAGGTTGGCA GTGTAGCCCT GAATCCCCAA GACTTCACTC AGTCTCCCCT CAACCACCTA AACCAGAATA 000400
000401 AACTGATGTA GCAGGACTCC TCAAACACTG TGCAGGGTCT CCATGTCCTC GATGGCCCCT GATGAGCCAC AGTACCCTCA 000480
000481 GGTCCTAGTG AAGGAGCTGG TGCTGCCTCC TGCCTTTCCC CACATGGGGT CCTGCAGCTC ATCCCACACA GCCTCAGATT 000560
000561 CCCTCTACAG AACCTGCCCA CAGATGTCTT CTGAGACCAG CAATACTGGG AGGCCTGTGG CCCAGACCCA GGAGGAACCA 000640
000641 GCTGAGAGGC TCCGTGGAGG TATCGCTGAT GGTGTAACCA GAATGAAAAT GCCCACTTCT GTTCTGCTCC CTGAGAACAA 000720
000721 CTGTCAAGCC AGCATGAGTT TCCAGTTGGA ACTTTTCCTT TTCTCCCCAT GTTTGTCACT GTTTTAATGG ACATCGCCTG 000800
000801 GCTATTAAAT CCCCCGATGA ACTCACTTTG AAAATTATCT ATTGCACTGG GCACCCTTTC AGGAATCACT GAGTGTTAAT 000880
000881 TTTCTCAGTC TGAGTGATAA TTTATGAGTC AAACAAGGAC AGATCTGAAG CCAGAGGCTG CTCCTGTTGG GAAATCCCTG 000960
000961 AGGATGATGT TCCAGGGAAG CCTCCAGCCT TGGGAGTCCC GTGGAACTGA GCCAGCCCAG GTCATGAAGG GAGCTGGTGC 001040
001041 CAGACACTGA CTGGGGACCT GCTGGCCTCT GGGCAGACCG CTCTGTCGCT GCACTTGGCC TGCTGGGTAT Ccctgtgcag 001120
001121 tcataccaag tcctgtgctc agaagggccc cagagtagtt taaagttctg ctgccgcccc tggaagctca tgattttgaa 001200
001201 caacaacaac aacaaaaaac ccacgttttc cactcggccc cacacattat gtggccTGCG CAGCTGTCAG GCTGTGGCCA 001280
001281 CAGTGCTGGC ATCTCTCACA CAATGAAGGC TGCTGGAGTC CTGGCTGACT TGTTTTGACT CTTTTGTGAG GCCCACACCT 001360
001361 AAGCTAAACA CTCACGTGCC CCCACGCTGA CTCCCCACAC TCTAAAGCAT GAATCTGCCC CTTCAGCTGG GAGAGGGTCC 001440
001441 TCGTGTCATC TGGGTTTTTG GAGAGAAGGT CAAGGGAGCC TGGGTTCTAG TTCTTCAGTA ATCAAGAGCA ATGGTCTTAC 001520
001521 CTGTTCACAG GTCCCTGTGG CTGCTTTACA GAAAGCAGGA AGTGGCCACT TCAGCCACAC GGCTGCATTT CCAGCTCAGT 001600
001601 CCAGGCAGAG CTGCACCCTG CCTTGCACCT CTGCAGATCC TGAGGGGAGT CCTTAACTGA GCCAGGGCGA GTCCTGGGGG 001680
001681 CACTCTGCCC CTGGGCAGGC CCTGAATCTC CTCTGCTCCC ACACTCTAGA GTTCAACAGG TCTCAGGGGC TCTGCCTGAG 001760
001761 GACTGTCCTT CAACCAGGTA TTCGTAATTT CCCCAAGACC CAGGCTTGCT GAGTCACTCA GTTACCTGAA TGCCTTTTTC 001840
001841 ACAAAGGAAT GACTGTGCTG CTCCGTCTTC CTTCTTTTTT GTTTGCGAGG CCACAGGGAA ATCTGGATCC TCTGGTGAAA 001920
001921 AAGCAAATCC AGTtgctgct gctgctgctg ctgctgctgc tgctgctgct gctgctgctg ccgccgcCAG TTCTTGTAAA 002000
002001 TGTCCTCACT TGGTTTCTGG GCAGCAACTT CCTTGACTTG CCTGGGGAGC GGATCTGAGC TGCATTTACC AGGCCATGCC 002080
002081 CAGGGGAAGT GATCAGTGTG GGACCGTGAA GCTGGATTTC CCCAGGAGCT CCCTCCAAGC TTCTGGGATG ATGATAAGAC 002160
002161 TCGGGATGAA CCAAGGATCT GGAACCATGG GACAATGTGA AGTCTAGACC CAGTGGAGGA AGAGAAAGGC TATGGGAAGG 002240
002241 GCAGGCTTCA CGttactgag catccgctac ctgccacaca ctttcacgtg gacttattct gtgtgtttct cacagcaccc 002320
002321 ttgagaaata gagactacga tcacatcttt tacataaaag aaaaccacca tccagggagg cgaagtccct tgctcaCAGA 002400
002401 CTGTCATGTG GGAAGCTCTC TGGATGCAAT GATGTCCTCC AGTTGCAGTA CCAGGCAAGC TGTCCCAGAG TTCATGGAGC 002480
002481 GGAAAGGCTC GAGAAGCAAC TGAGGATGCT CAAATCACAG GTTTATAAAA TCCATTCGTA AAACACAGCA AGAAGCTGAG 002560
002561 GGAAGGAGAT GGGAGGGCCG TATGACCTGA TTCCTGTGCT GTCAACATTC ATCGGTTCTC TTCTTTCTCT GCTAGTCAAC 002640
002641 CTCACCCACT CAGGTGTGAC CACGAGGACC AGAGCCGAGG TCTGGGCAAG AGTGCTCACA GCTTAAGGGC TTATGACACA 002720
002721 CACCGGCTCA ACGGGACAGA CATGGGACAA GTGTGCCTGA TCATGGTGGC GTTGCCAAGA AGCAGCTGTC GCACTGCCAT 002800
002801 GGGTTCTACG TGTTTCTTGG GCAGAGGACG CATGGGACCA GAATGGGCAC CAGGAATGGT GGTGAACAAA GGCCCCATGG 002880
002881 TTCTGCATGT TTAGGTGTCT CTTGTATAAA GGCACATTGT GAATTGAACA TTTAGTGCCC AGGAGCCTCA TGCATATTAA 002960
002961 GTATCTCTTG GCCCTTGTGT CTCTTCCTTC CCACATGTAA CATACCTGTT CTCTGTAACT ATCTATTCTG AACGTATCTA 003040
003041 AAAACCATGT CTTGCCTGTG TT
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Predicted Small Protein

Name NONHSAT144642_smProtein_1829:2035
Length 69
Molecular weight 6500.231
Aromaticity 0.0588235294118
Instability index 50.05
Isoelectric point 7.67608642578
Runs 5
Runs residual 0.0669713831479
Runs probability 0.0305599717364
Amino acid sequence MPFSQRNDCAAPSSFFFVCEATGKSGSSGEKANPVAAAAAAAAAAAAAAAAAASSCKCPH
LVSGQQLP
Secondary structure LLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLL
LLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
LLLLLLLL
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