SVIL-AS1
Contents
Annotated Information
Name
SVIL-AS1：SVIL antisense RNA 1
RP11-534G20.3 and ENST00000438399[1]
Characteristics
ENST00000438399 is a 3307-bp intergenic lncRNA transcript from the RP11-534G20.3 gene located on chromosome 10: 29698475–29713107.[1]
Expression
The expression of ENST00000438399[1].
ENST00000438399 is down-regulated in the RA(rheumatoid arthritis) FLSs(fibroblast-like synoviocytes) compared with normal FLSs. In addition, ENST00000438399 expression is positively correlated with PTPRQ mRNA expression and negatively correlated with PTHLH mRNA expression [1]
Diseases
Rheumatoid arthritis [1]
Sequence
>NR_110920.1 Homo sapiens SVIL antisense RNA 1 (SVIL-AS1), transcript variant 1, long non-coding RNA
000001 GCACATGCGC GGCAGCTCCC GCTGCTGAAT AGCTGAGAGG CGCACCCGGG CGGCCAGCTG GGCTCGGAGT GCAGCGGGGT 000080
000081 TAGGATGGAC GAGGACGTGT TGCACCCTGA AGAGCCTCAT CATCGGTGAG AGTGGGGTGG GCAAGTCCAG CCTGCTCTTG 000160
000161 AGGTTCACAG ATGATACCTT TGATCCAGAA CTTGCAGCAA CAATAGGTTC ACCTGCTTCC AGGCGGGCAG GGCGTTGTAT 000240
000241 TCATCCCTCG TCATGTCTAG TGCAAACTGG AAACATTGGG AGAAGCGCCC CGCGGCTCAG TGAAAGGAGC CGGGCGTGCG 000320
000321 TGTGTTGTTT TACTCCCATC CCCACCCCAC CGGAAGAACC GCTTACCTCG AAGTCTTCGT CGGTGAGATA GATCTCAAGC 000400
000401 TTCAGAGGAT CGACCCCCTC CGGGAGTGGC CTGGCCAGGA GGTCGGCCAG CGGATCCATC TTCGGTTGTG AATCCGGCCC 000480
000481 GGAATGCAGC CACCCCTTAG AGCAACCCCC CTTGCTGCTC GTGCCCTGCT GTGCTACTGC CTCAGTCACT TCCTGCTTGG 000560
000561 TCAAGACCAC AGCTGCTGAT GTCACAGCTG AGGCACATCA GAAAGGCTGC CTGATTCAAA GAAAGCTGCC GGATAAATCA 000640
000641 TAGAGCACAG ACACTTCTAC CTCATGCTCT TATGGGACTT TAGGAACCAA ACATAAGCAC CTATGGAAAA TGCACGGCGG 000720
000721 TCTTGAAAGG CTGTGGTCTT TATCAGAAAA TATCTGAATG ACTGTTTGTT ATGTCAGTCC TACTCTGCAG GCTTGCTAAG 000800
000801 ATGATGATTG AAAGGGCTCT TGGTTTCTGC TTTGGAATCT GGCATTTATG TTTTGAAGCG TTGTGAGCAA GCGATGTGGC 000880
000881 AGATTGCAGG GTGAGGGGGA CAAACCTGGG CCAGGAGCCA GGGGTTTCTC TACCCCCTTC CCTGACTTAC AGCTGGAACT 000960
000961 GGGCTCAGTG GTTTCAGCCT CATTTGCTAA GAAGGTCTGG GTATGTAATC CTGGCTGCAT CTTAAAATCC CTAGGAGCTT 001040
001041 TTAAGACATA TTGACACATA AGCTCTAACT CACATGAAAC GAAAACACAT CTCTGGGGCT GGGCTGAGCA AATGCATTTT 001120
001121 TTAAAAGGCC CCTCAGGTGA TTCTGTCTCA GAGATGTTGA AAACCAGTGG GTTAGGAGCT CAGTCATCCA CTTTCAGATC 001200
001201 TGTGATTATG CCACTATTAA ATACAGTTGG CTATCACATA GATTTTATGC TTTAGCTTGT TCTTTTTTCC TTTGCTATAC 001280
001281 CAAATAAAAT CTTCTGAGCT GTAGTTCCAG TCCTTAAAAT AATGGTTGTT ACCATACTGA GGTTAAACAT TAGTGCATTT 001360
001361 GCTTAACAAG GACTTTAAAA CTTATCACAC TGCCATAATT TTTAATGGTT TCTATAATGA TTAATTAATA AGAAAATCAA 001440
001441 TAATTGGATT TTAAGCAGGA AACTAGGCAG GAAAGTTGAA ATTCATAGAC CAATTCAATG GAAAACATTA AAATGTATTG 001520
001521 GGAGATGCCC AATATTCTAT GCTGTTTGGT GGTTCACTGG TTTCTAATCT ATTATAACGG CACCCATAGT TAAAAAGCAC 001600
001601 TAGTTTTTTT TTGGTCTGAT AGTTGAAAAA ACAACAATCC TTTGCACGTA GGAATTATTT TTTCCAACAT CATAATTTCT 001680
001681 GACTTTGCAC ATATTCTATT GAATTGCCAA AATGACTTTA AAGAGTCTAG TACATGCAGG GAATATTACA ATTGCAATCA 001760
001761 TTATTTTAAC ACCATCTCCT CCCCCTCTTC CCTTCCCAAA AGATATAAAG ACATAAACAT CATCTGCTGC CAAATAAATC 001840
001841 CTGAAATTCG AGGGCGATGC TGGGAAGGTA TGAAATTAGA GGGAGGCATG TTGCTTTTGC ACTTTCAGAT CAATGGCTGA 001920
001921 ATTCCAGACC CGGGGAAGCC TTTCAGATCC GCATGTAATT TGTTTAAACA ATTGCTGTTC ATCTGCCACA GCAGCACTTG 002000
002001 TAATGCCGCA GGGAGGAACT TGCAGCATTT CTTGCTCACT TCAAGAAATC AACTATAACA AACCTCTTCC AGAAGACTAC 002080
002081 GACATCCATA TTTCTGCAAT AGTTAGATAA AAGTTAAAGA ACTGTTCCTT TTGTGAATAT TCACAGTCCA CTGCATATAA 002160
002161 TCGTTTATGA AAACTGAACC CTATAAAGAG CGAGAGTAGA GGACTGTGGT GAGAACAGAG GGATCGAAGG GAATCAGCTC 002240
002241 GCTTGAAGAG CTGTCCCCGG GCGGCGGCAG GAGTACCTGG GGATA
000081 TAGGATGGAC GAGGACGTGT TGCACCCTGA AGAGCCTCAT CATCGGTGAG AGTGGGGTGG GCAAGTCCAG CCTGCTCTTG 000160
000161 AGGTTCACAG ATGATACCTT TGATCCAGAA CTTGCAGCAA CAATAGGTTC ACCTGCTTCC AGGCGGGCAG GGCGTTGTAT 000240
000241 TCATCCCTCG TCATGTCTAG TGCAAACTGG AAACATTGGG AGAAGCGCCC CGCGGCTCAG TGAAAGGAGC CGGGCGTGCG 000320
000321 TGTGTTGTTT TACTCCCATC CCCACCCCAC CGGAAGAACC GCTTACCTCG AAGTCTTCGT CGGTGAGATA GATCTCAAGC 000400
000401 TTCAGAGGAT CGACCCCCTC CGGGAGTGGC CTGGCCAGGA GGTCGGCCAG CGGATCCATC TTCGGTTGTG AATCCGGCCC 000480
000481 GGAATGCAGC CACCCCTTAG AGCAACCCCC CTTGCTGCTC GTGCCCTGCT GTGCTACTGC CTCAGTCACT TCCTGCTTGG 000560
000561 TCAAGACCAC AGCTGCTGAT GTCACAGCTG AGGCACATCA GAAAGGCTGC CTGATTCAAA GAAAGCTGCC GGATAAATCA 000640
000641 TAGAGCACAG ACACTTCTAC CTCATGCTCT TATGGGACTT TAGGAACCAA ACATAAGCAC CTATGGAAAA TGCACGGCGG 000720
000721 TCTTGAAAGG CTGTGGTCTT TATCAGAAAA TATCTGAATG ACTGTTTGTT ATGTCAGTCC TACTCTGCAG GCTTGCTAAG 000800
000801 ATGATGATTG AAAGGGCTCT TGGTTTCTGC TTTGGAATCT GGCATTTATG TTTTGAAGCG TTGTGAGCAA GCGATGTGGC 000880
000881 AGATTGCAGG GTGAGGGGGA CAAACCTGGG CCAGGAGCCA GGGGTTTCTC TACCCCCTTC CCTGACTTAC AGCTGGAACT 000960
000961 GGGCTCAGTG GTTTCAGCCT CATTTGCTAA GAAGGTCTGG GTATGTAATC CTGGCTGCAT CTTAAAATCC CTAGGAGCTT 001040
001041 TTAAGACATA TTGACACATA AGCTCTAACT CACATGAAAC GAAAACACAT CTCTGGGGCT GGGCTGAGCA AATGCATTTT 001120
001121 TTAAAAGGCC CCTCAGGTGA TTCTGTCTCA GAGATGTTGA AAACCAGTGG GTTAGGAGCT CAGTCATCCA CTTTCAGATC 001200
001201 TGTGATTATG CCACTATTAA ATACAGTTGG CTATCACATA GATTTTATGC TTTAGCTTGT TCTTTTTTCC TTTGCTATAC 001280
001281 CAAATAAAAT CTTCTGAGCT GTAGTTCCAG TCCTTAAAAT AATGGTTGTT ACCATACTGA GGTTAAACAT TAGTGCATTT 001360
001361 GCTTAACAAG GACTTTAAAA CTTATCACAC TGCCATAATT TTTAATGGTT TCTATAATGA TTAATTAATA AGAAAATCAA 001440
001441 TAATTGGATT TTAAGCAGGA AACTAGGCAG GAAAGTTGAA ATTCATAGAC CAATTCAATG GAAAACATTA AAATGTATTG 001520
001521 GGAGATGCCC AATATTCTAT GCTGTTTGGT GGTTCACTGG TTTCTAATCT ATTATAACGG CACCCATAGT TAAAAAGCAC 001600
001601 TAGTTTTTTT TTGGTCTGAT AGTTGAAAAA ACAACAATCC TTTGCACGTA GGAATTATTT TTTCCAACAT CATAATTTCT 001680
001681 GACTTTGCAC ATATTCTATT GAATTGCCAA AATGACTTTA AAGAGTCTAG TACATGCAGG GAATATTACA ATTGCAATCA 001760
001761 TTATTTTAAC ACCATCTCCT CCCCCTCTTC CCTTCCCAAA AGATATAAAG ACATAAACAT CATCTGCTGC CAAATAAATC 001840
001841 CTGAAATTCG AGGGCGATGC TGGGAAGGTA TGAAATTAGA GGGAGGCATG TTGCTTTTGC ACTTTCAGAT CAATGGCTGA 001920
001921 ATTCCAGACC CGGGGAAGCC TTTCAGATCC GCATGTAATT TGTTTAAACA ATTGCTGTTC ATCTGCCACA GCAGCACTTG 002000
002001 TAATGCCGCA GGGAGGAACT TGCAGCATTT CTTGCTCACT TCAAGAAATC AACTATAACA AACCTCTTCC AGAAGACTAC 002080
002081 GACATCCATA TTTCTGCAAT AGTTAGATAA AAGTTAAAGA ACTGTTCCTT TTGTGAATAT TCACAGTCCA CTGCATATAA 002160
002161 TCGTTTATGA AAACTGAACC CTATAAAGAG CGAGAGTAGA GGACTGTGGT GAGAACAGAG GGATCGAAGG GAATCAGCTC 002240
002241 GCTTGAAGAG CTGTCCCCGG GCGGCGGCAG GAGTACCTGG GGATA