Difference between revisions of "Lnc-CHST12-1:3"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGCGCCACTACACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAATTTTTTTTTTTGGTAGATACGGGGTCTTGCTTTGTCACCCAGGCTGGTCTCAAACTCCTGAGCTCGAGTGCTCCTTCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCTGCTGTGCCCAGCAGGAATAATTTCTCAGTGCATCTCTGATGGGGAGGCTAATGAAGAAAGGACACCTGGTTTGAAGGCTTCTCTGTGTCTGTCCGTGGGCGCTACTGATCTGAGCCAAGCACCATTCCGCAGGCATGCCTGAAATGACTCCCATGGCTGTCATGGTGCCATCTGGAGAGCATTTGCTCACTGTAATGGTCCCGTCACACTTGTCTGATGAGGATCTGTTGGTTGACTTTGACAGTGATAAACGAACACAGCCTATCTGGGTGTTTTTTGCACTTATAGTTTGGGGGTTTGAAGTACTGGCTAGAAGCTGGCGGGGTGTGTGTGTGCAGGTGTGCGAGTGCATGTGCAAGTGTGCGTGCAAGTGTGAGTCTGCACTTGTGTGCAAGAGAATGTGTGTGTGTGTGTGTTTGGAGATTTGGACTTGAAAATTCTAGCTCAGGTCTTTGGGGTAGTGTTTGACCTGAACTCTGAAAGGCAGAGGGTCCCAGACTTTCCTGGGATGATGGGAACTGGGCACCCCAGATGAGGCTCGGTTGTGAGTAGGAGCGGGGTGGGCCACCGAAGAGAAGACAGAGTGGGCCTGTAGGGCCAGCCCGAGGTACCCACAGTGGAGGGTCTACAGGCTGATTTGGGAGGTGGTGGTTTATACCTGTAGTCACCTTCTATCTTAGTTAGGAATTCACCTTCACACTTCCAGAAACTGCCAAGAAGAATGCCGCCGCTCAGGTTTATCTGGTAGAATAAGCTGTTTGAACAAAGATCTGGAGGTTGCACAATCCTGTGTCATTCTGGATTTATCTTGGGGTCGGGAGTCAACGATACTTCTTGTGCTGTCGTTTCTCCGGCCGTGTGAAGTTACCACCTCGTGAGTGGTCATAAGTTAGCGTGTCTAAATGCACTTTGAAATCCTAGGATGAAAAAGCCAGGCCCTGTCTTTTTTCCTTGTCTAAGCACCATCCTTGCTTAGGAGAGACACGGCTGTGGCTCTCAGGCTGTGGGGCAATGTTCTGCTTATAATGTTTCAAGAGGTTCAAAGCGTGCAGGCCCCATGCTCCGTGAGAGCCTTGACCTGGGTCAGCAGGGGCGGCTGGGCTTGACTCGAGAATTCCCACAGGGCCCGAGGGAAGAGCAGAGCAAGAGGGAGGAGCGCGTGGAGCCCTATGTGGCCTGCGATATTGGGGTGGCGTCCAGGCCCGCCTAGATGGGGGAGGGAGACAACAGAGCTGCCACCTGCTCACCGCAGACCCAGGGGCCCAGGAGGAGCGGACTAGGACCGGCAGTGCCTTCCAGCCTAGGTCTCCTGCCCCTGGGCTGGAGTTCATCTTTTAGGCAAATTTGGAATAGGAACCTTAAAAATGCTTTCTTCACTCGTTTAAATAGTAATGATAAGAATATGGCTGCAGGGGGCAGCTTATGCCTGTAATCCCACCATTTTGGGAGCTCAAGGCAGGAGTATTGCTTGAGCCCAGAAGTTTGAGACCAGTCTGGGCAACATAGTGGAAACTTGTCTCTCCAAAAGCTAAAAGAAAAAGCCGTGCATGGTGGTATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGTCTGGGAGGTCGAGGCTGCTGTGAGCCATGATTGCACCACTGCATTCCAGCCTGGGTGACAGAGCAAGATCTTGTCTTAAAAAAAAAAAAAAAAAAAAAGGTGTTGTATTTTATCATTAGAAGGCCATCCTGTTTAGAAGAGTGGGTTTCTCATAAGAAAAAAAAGAAAAAGGTTGACCTTGTAAGTATATTTTCTTGGGTGAATTGTGGTGGTGGTAATGGTTTTAACTGGTGTTAATTTCAGTTCTTTTAAAAGTTGTGGTAAGATACATGCAACATAAAATGTGCCCTCTTCCCCATTTTTAAGTGAACAGTTCAGTGGCATTAAGCACATTCAGTTTGCCTGCCACCGTTACCACCATCCATCTCCAAAATTCTCTCCATTTACAAAACTGAAACTCTGTCCCTATTAAACACTAGCTCCCCATTCCCCACTGTGCCGCCCCCCCAAAGCCCCTGGCACCAACCATTCTACTTCCTGTCTCTGAGTTTGACTAGGGACCTCCTGTAAGTGGATTTGTACAATATTTGTCCTTTTGTGTCTGGCTTCTTCATGTAGTATAATGTCTTCAAGGTTCATTCATGTTGTAGTCAGGATCACCTTCCTTTTAAAGGTTGAACGATATCCCGTTGTATGGACAGACCACATTTTATCCATTCACCCAGGGATGGACACCTGGGTTGCTTCCATCTCTCGGCTCTTGTGAATAATGCTGCTGTGAACACGGGTGTGCAGATACCTGTTCAAGTCCCTGCTGTTTTCTTTTGAGACGGAGTCTCGCTCTGTCTCCCAGGCTGGAGTGCGGTGGCACCATCTCAGCTCACTGCAAGCTCCGCCTCCCAGGTTCAGGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATGTTAGCCAGGATGCTCTGGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAACTGCTGGGATTACAGGCATGAGACACCACGCCCCGCCGAGTCCCTGCTTTTAATTCTTTGGGGCAGGGATCCCCAACCCCCTGGTGATGGACCAATACTGGCCTGCGGCCCCTTAGGAACTGGACTGCACAGCAGGAGATGGCATGGGAAAGTAGCACACAGTCGGGACTCTGCAGCCGAGTTTGCCTCCTTGAATGCACACATAACACAGGAACAAAGACAGAGCTGCTTCCCTCCTGTTGGGTCTCTGGCGGACAGTCAGGTATGCTGAGGGAGACACTGTTCTCAAACTCCAGGCCAGGGTGGTTTCCGGAGGGTCCACCGGTGGTCTCATCTCTTCTCTCTCAAACCATGGATGGTGCCTTTTAAAGAAAATGACACCGGCCAGGTGCGGTGGCTCATGGCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAGGTCGGAAGTTCAACACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTATTAAAAATACAAAAATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG</dnaseq>| | sequence = <dnaseq>GGCGCCACTACACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAATTTTTTTTTTTGGTAGATACGGGGTCTTGCTTTGTCACCCAGGCTGGTCTCAAACTCCTGAGCTCGAGTGCTCCTTCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCTGCTGTGCCCAGCAGGAATAATTTCTCAGTGCATCTCTGATGGGGAGGCTAATGAAGAAAGGACACCTGGTTTGAAGGCTTCTCTGTGTCTGTCCGTGGGCGCTACTGATCTGAGCCAAGCACCATTCCGCAGGCATGCCTGAAATGACTCCCATGGCTGTCATGGTGCCATCTGGAGAGCATTTGCTCACTGTAATGGTCCCGTCACACTTGTCTGATGAGGATCTGTTGGTTGACTTTGACAGTGATAAACGAACACAGCCTATCTGGGTGTTTTTTGCACTTATAGTTTGGGGGTTTGAAGTACTGGCTAGAAGCTGGCGGGGTGTGTGTGTGCAGGTGTGCGAGTGCATGTGCAAGTGTGCGTGCAAGTGTGAGTCTGCACTTGTGTGCAAGAGAATGTGTGTGTGTGTGTGTTTGGAGATTTGGACTTGAAAATTCTAGCTCAGGTCTTTGGGGTAGTGTTTGACCTGAACTCTGAAAGGCAGAGGGTCCCAGACTTTCCTGGGATGATGGGAACTGGGCACCCCAGATGAGGCTCGGTTGTGAGTAGGAGCGGGGTGGGCCACCGAAGAGAAGACAGAGTGGGCCTGTAGGGCCAGCCCGAGGTACCCACAGTGGAGGGTCTACAGGCTGATTTGGGAGGTGGTGGTTTATACCTGTAGTCACCTTCTATCTTAGTTAGGAATTCACCTTCACACTTCCAGAAACTGCCAAGAAGAATGCCGCCGCTCAGGTTTATCTGGTAGAATAAGCTGTTTGAACAAAGATCTGGAGGTTGCACAATCCTGTGTCATTCTGGATTTATCTTGGGGTCGGGAGTCAACGATACTTCTTGTGCTGTCGTTTCTCCGGCCGTGTGAAGTTACCACCTCGTGAGTGGTCATAAGTTAGCGTGTCTAAATGCACTTTGAAATCCTAGGATGAAAAAGCCAGGCCCTGTCTTTTTTCCTTGTCTAAGCACCATCCTTGCTTAGGAGAGACACGGCTGTGGCTCTCAGGCTGTGGGGCAATGTTCTGCTTATAATGTTTCAAGAGGTTCAAAGCGTGCAGGCCCCATGCTCCGTGAGAGCCTTGACCTGGGTCAGCAGGGGCGGCTGGGCTTGACTCGAGAATTCCCACAGGGCCCGAGGGAAGAGCAGAGCAAGAGGGAGGAGCGCGTGGAGCCCTATGTGGCCTGCGATATTGGGGTGGCGTCCAGGCCCGCCTAGATGGGGGAGGGAGACAACAGAGCTGCCACCTGCTCACCGCAGACCCAGGGGCCCAGGAGGAGCGGACTAGGACCGGCAGTGCCTTCCAGCCTAGGTCTCCTGCCCCTGGGCTGGAGTTCATCTTTTAGGCAAATTTGGAATAGGAACCTTAAAAATGCTTTCTTCACTCGTTTAAATAGTAATGATAAGAATATGGCTGCAGGGGGCAGCTTATGCCTGTAATCCCACCATTTTGGGAGCTCAAGGCAGGAGTATTGCTTGAGCCCAGAAGTTTGAGACCAGTCTGGGCAACATAGTGGAAACTTGTCTCTCCAAAAGCTAAAAGAAAAAGCCGTGCATGGTGGTATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGTCTGGGAGGTCGAGGCTGCTGTGAGCCATGATTGCACCACTGCATTCCAGCCTGGGTGACAGAGCAAGATCTTGTCTTAAAAAAAAAAAAAAAAAAAAAGGTGTTGTATTTTATCATTAGAAGGCCATCCTGTTTAGAAGAGTGGGTTTCTCATAAGAAAAAAAAGAAAAAGGTTGACCTTGTAAGTATATTTTCTTGGGTGAATTGTGGTGGTGGTAATGGTTTTAACTGGTGTTAATTTCAGTTCTTTTAAAAGTTGTGGTAAGATACATGCAACATAAAATGTGCCCTCTTCCCCATTTTTAAGTGAACAGTTCAGTGGCATTAAGCACATTCAGTTTGCCTGCCACCGTTACCACCATCCATCTCCAAAATTCTCTCCATTTACAAAACTGAAACTCTGTCCCTATTAAACACTAGCTCCCCATTCCCCACTGTGCCGCCCCCCCAAAGCCCCTGGCACCAACCATTCTACTTCCTGTCTCTGAGTTTGACTAGGGACCTCCTGTAAGTGGATTTGTACAATATTTGTCCTTTTGTGTCTGGCTTCTTCATGTAGTATAATGTCTTCAAGGTTCATTCATGTTGTAGTCAGGATCACCTTCCTTTTAAAGGTTGAACGATATCCCGTTGTATGGACAGACCACATTTTATCCATTCACCCAGGGATGGACACCTGGGTTGCTTCCATCTCTCGGCTCTTGTGAATAATGCTGCTGTGAACACGGGTGTGCAGATACCTGTTCAAGTCCCTGCTGTTTTCTTTTGAGACGGAGTCTCGCTCTGTCTCCCAGGCTGGAGTGCGGTGGCACCATCTCAGCTCACTGCAAGCTCCGCCTCCCAGGTTCAGGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATGTTAGCCAGGATGCTCTGGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAACTGCTGGGATTACAGGCATGAGACACCACGCCCCGCCGAGTCCCTGCTTTTAATTCTTTGGGGCAGGGATCCCCAACCCCCTGGTGATGGACCAATACTGGCCTGCGGCCCCTTAGGAACTGGACTGCACAGCAGGAGATGGCATGGGAAAGTAGCACACAGTCGGGACTCTGCAGCCGAGTTTGCCTCCTTGAATGCACACATAACACAGGAACAAAGACAGAGCTGCTTCCCTCCTGTTGGGTCTCTGGCGGACAGTCAGGTATGCTGAGGGAGACACTGTTCTCAAACTCCAGGCCAGGGTGGTTTCCGGAGGGTCCACCGGTGGTCTCATCTCTTCTCTCTCAAACCATGGATGGTGCCTTTTAAAGAAAATGACACCGGCCAGGTGCGGTGGCTCATGGCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAGGTCGGAAGTTCAACACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTATTAAAAATACAAAAATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:lnc-CHST12-1]] |
Revision as of 13:21, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-CHST12-1:3 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT118801 |
| Classification |
intergenic |
| Length |
3365 nt |
| Genomic location |
chr7+:2479469..2483692 |
| Exon number |
2 |
| Exons |
2479469..2482398,2483258..2483692 |
| Genome context |
|
| Sequence |
000001 GGCGCCACTA CACTCCAGCC TGGGCGACAG AGCGAGACTC CGTCTCAAAA AAAAATTTTT TTTTTTGGTA GATACGGGGT 000080 000081 CTTGCTTTGT CACCCAGGCT GGTCTCAAAC TCCTGAGCTC GAGTGCTCCT TCTGCCTCAG CCTCCCAAAG TGCTGGGATT 000160 000161 ACAGGCGTGG GCTGCTGTGC CCAGCAGGAA TAATTTCTCA GTGCATCTCT GATGGGGAGG CTAATGAAGA AAGGACACCT 000240 000241 GGTTTGAAGG CTTCTCTGTG TCTGTCCGTG GGCGCTACTG ATCTGAGCCA AGCACCATTC CGCAGGCATG CCTGAAATGA 000320 000321 CTCCCATGGC TGTCATGGTG CCATCTGGAG AGCATTTGCT CACTGTAATG GTCCCGTCAC ACTTGTCTGA TGAGGATCTG 000400 000401 TTGGTTGACT TTGACAGTGA TAAACGAACA CAGCCTATCT GGGTGTTTTT TGCACTTATA GTTTGGGGGT TTGAAGTACT 000480 000481 GGCTAGAAGC TGGCGGGGTG TGTGTGTGCA GGTGTGCGAG TGCATGTGCA AGTGTGCGTG CAAGTGTGAG TCTGCACTTG 000560 000561 TGTGCAAGAG AATGTGTGTG TGTGTGTGTT TGGAGATTTG GACTTGAAAA TTCTAGCTCA GGTCTTTGGG GTAGTGTTTG 000640 000641 ACCTGAACTC TGAAAGGCAG AGGGTCCCAG ACTTTCCTGG GATGATGGGA ACTGGGCACC CCAGATGAGG CTCGGTTGTG 000720 000721 AGTAGGAGCG GGGTGGGCCA CCGAAGAGAA GACAGAGTGG GCCTGTAGGG CCAGCCCGAG GTACCCACAG TGGAGGGTCT 000800 000801 ACAGGCTGAT TTGGGAGGTG GTGGTTTATA CCTGTAGTCA CCTTCTATCT TAGTTAGGAA TTCACCTTCA CACTTCCAGA 000880 000881 AACTGCCAAG AAGAATGCCG CCGCTCAGGT TTATCTGGTA GAATAAGCTG TTTGAACAAA GATCTGGAGG TTGCACAATC 000960 000961 CTGTGTCATT CTGGATTTAT CTTGGGGTCG GGAGTCAACG ATACTTCTTG TGCTGTCGTT TCTCCGGCCG TGTGAAGTTA 001040 001041 CCACCTCGTG AGTGGTCATA AGTTAGCGTG TCTAAATGCA CTTTGAAATC CTAGGATGAA AAAGCCAGGC CCTGTCTTTT 001120 001121 TTCCTTGTCT AAGCACCATC CTTGCTTAGG AGAGACACGG CTGTGGCTCT CAGGCTGTGG GGCAATGTTC TGCTTATAAT 001200 001201 GTTTCAAGAG GTTCAAAGCG TGCAGGCCCC ATGCTCCGTG AGAGCCTTGA CCTGGGTCAG CAGGGGCGGC TGGGCTTGAC 001280 001281 TCGAGAATTC CCACAGGGCC CGAGGGAAGA GCAGAGCAAG AGGGAGGAGC GCGTGGAGCC CTATGTGGCC TGCGATATTG 001360 001361 GGGTGGCGTC CAGGCCCGCC TAGATGGGGG AGGGAGACAA CAGAGCTGCC ACCTGCTCAC CGCAGACCCA GGGGCCCAGG 001440 001441 AGGAGCGGAC TAGGACCGGC AGTGCCTTCC AGCCTAGGTC TCCTGCCCCT GGGCTGGAGT TCATCTTTTA GGCAAATTTG 001520 001521 GAATAGGAAC CTTAAAAATG CTTTCTTCAC TCGTTTAAAT AGTAATGATA AGAATATGGC TGCAGGGGGC AGCTTATGCC 001600 001601 TGTAATCCCA CCATTTTGGG AGCTCAAGGC AGGAGTATTG CTTGAGCCCA GAAGTTTGAG ACCAGTCTGG GCAACATAGT 001680 001681 GGAAACTTGT CTCTCCAAAA GCTAAAAGAA AAAGCCGTGC ATGGTGGTAT GCACCTGTAG TCCCAGCTAC TTGGGAGGCT 001760 001761 GAGGTGGGAG GATCGCTTGA GTCTGGGAGG TCGAGGCTGC TGTGAGCCAT GATTGCACCA CTGCATTCCA GCCTGGGTGA 001840 001841 CAGAGCAAGA TCTTGTCTTA AAAAAAAAAA AAAAAAAAAA GGTGTTGTAT TTTATCATTA GAAGGCCATC CTGTTTAGAA 001920 001921 GAGTGGGTTT CTC< |