Difference between revisions of "ENST00000591093.1"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GTGGAGTACTCACCTACCTGCTGCATGAAGGCAGCATGGAGGGACTGTGGTGGATTATCTGCAAAGATGGCCAAAATTCTCTCATCCCTGCAGGCACATACAAGATGCCAGAATCAGTCAAAACTAAGCTCACTGTCCTTGCTAATATTCTGCCCCAGAGAAGAACTGAAGCTCAGCTCTTCACCCTACAGAAAGCCTGAATTTTGTAAATGTTCTGCTTAGAATGAGGAAGAAAGATGAAGAATGAGGAGGAAGAAGGAAGGAACGAGAGAGAGCCAGGTTTCCAGAAGTTCCCCAGTCATTGAGCATTTCTGAGGCTCTTGATGCATATGCCAAGTAGTTATGGAGAAAGACACAGCAGCTTACCTCTGCAGGCATCATTGTGTGAAAGGAAGACCCAGGCTCTCTCACCACCCTTGAACAGAAGCCTTTTGCTAAGGTGATAGCTACATGTCCAAGCCTATTGCGTGGCATGCATTTTGCCTTCTGCAGCCCACTAAAGGAGTTTGCAGTTCACCCGCAAACCTCAGCGATCCAAGCTCCCCTGGATGACCATCACTCACCAAGAAAAGAGCAATAACAGGACCTGTTTTGCTAATCCAGGACTGTTCTCCAGCACTAACTCTAAATAATCCCTTCTGCTAGAGTCCACTTTCTGGAACCTGTTGCCTCCGTTTTCAACGTTTCCCAAACTTGGTCCGTTGTGTGAGCTGGCTGATAAAAGTTCCAGGGAGAAGACATCTTACTCTTATTGGATCATGCACAGTGCCTGAAGCATTCTGTTGCATGTAGAAGTCAGTAAATTGCAGATGTAA</dnaseq>| | sequence = <dnaseq>GTGGAGTACTCACCTACCTGCTGCATGAAGGCAGCATGGAGGGACTGTGGTGGATTATCTGCAAAGATGGCCAAAATTCTCTCATCCCTGCAGGCACATACAAGATGCCAGAATCAGTCAAAACTAAGCTCACTGTCCTTGCTAATATTCTGCCCCAGAGAAGAACTGAAGCTCAGCTCTTCACCCTACAGAAAGCCTGAATTTTGTAAATGTTCTGCTTAGAATGAGGAAGAAAGATGAAGAATGAGGAGGAAGAAGGAAGGAACGAGAGAGAGCCAGGTTTCCAGAAGTTCCCCAGTCATTGAGCATTTCTGAGGCTCTTGATGCATATGCCAAGTAGTTATGGAGAAAGACACAGCAGCTTACCTCTGCAGGCATCATTGTGTGAAAGGAAGACCCAGGCTCTCTCACCACCCTTGAACAGAAGCCTTTTGCTAAGGTGATAGCTACATGTCCAAGCCTATTGCGTGGCATGCATTTTGCCTTCTGCAGCCCACTAAAGGAGTTTGCAGTTCACCCGCAAACCTCAGCGATCCAAGCTCCCCTGGATGACCATCACTCACCAAGAAAAGAGCAATAACAGGACCTGTTTTGCTAATCCAGGACTGTTCTCCAGCACTAACTCTAAATAATCCCTTCTGCTAGAGTCCACTTTCTGGAACCTGTTGCCTCCGTTTTCAACGTTTCCCAAACTTGGTCCGTTGTGTGAGCTGGCTGATAAAAGTTCCAGGGAGAAGACATCTTACTCTTATTGGATCATGCACAGTGCCTGAAGCATTCTGTTGCATGTAGAAGTCAGTAAATTGCAGATGTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:ENSG00000236172.2]] |
Revision as of 14:20, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000591093.1 |
| Source |
Gencode19 |
| Same with |
NONHSAT068882 |
| Classification |
intergenic |
| Length |
815 nt |
| Genomic location |
chr2-:6775364..6790341 |
| Exon number |
8 |
| Exons |
6775364..6775383,6775708..6775772,6778223..6778285,6778410..6778493,6778849..6778929,6779183..6779409,6789343..6789513,6790238..6790341 |
| Genome context |
|
| Sequence |
000001 GTGGAGTACT CACCTACCTG CTGCATGAAG GCAGCATGGA GGGACTGTGG TGGATTATCT GCAAAGATGG CCAAAATTCT 000080
000081 CTCATCCCTG CAGGCACATA CAAGATGCCA GAATCAGTCA AAACTAAGCT CACTGTCCTT GCTAATATTC TGCCCCAGAG 000160 000161 AAGAACTGAA GCTCAGCTCT TCACCCTACA GAAAGCCTGA ATTTTGTAAA TGTTCTGCTT AGAATGAGGA AGAAAGATGA 000240 000241 AGAATGAGGA GGAAGAAGGA AGGAACGAGA GAGAGCCAGG TTTCCAGAAG TTCCCCAGTC ATTGAGCATT TCTGAGGCTC 000320 000321 TTGATGCATA TGCCAAGTAG TTATGGAGAA AGACACAGCA GCTTACCTCT GCAGGCATCA TTGTGTGAAA GGAAGACCCA 000400 000401 GGCTCTCTCA CCACCCTTGA ACAGAAGCCT TTTGCTAAGG TGATAGCTAC ATGTCCAAGC CTATTGCGTG GCATGCATTT 000480 000481 TGCCTTCTGC AGCCCACTAA AGGAGTTTGC AGTTCACCCG CAAACCTCAG CGATCCAAGC TCCCCTGGAT GACCATCACT 000560 000561 CACCAAGAAA AGAGCAATAA CAGGACCTGT TTTGCTAATC CAGGACTGTT CTCCAGCACT AACTCTAAAT AATCCCTTCT 000640 000641 GCTAGAGTCC ACTTTCTGGA ACCTGTTGCC TCCGTTTTCA ACGTTTCCCA AACTTGGTCC GTTGTGTGAG CTGGCTGATA 000720 000721 AAAGTTCCAG GGAGAAGACA TCTTACTCTT ATTGGATCAT GCACAGTGCC TGAAGCATTC TGTTGCATGT AGAAGTCAGT 000800 000801 AAATTGCAGA TGTAA |
Predicted Small Protein
| Name | ENST00000591093.1_smProtein_35:199 |
| Length | 55 |
| Molecular weight | 6132.1821 |
| Aromaticity | 0.0740740740741 |
| Instability index | 73.562962963 |
| Isoelectric point | 9.42889404297 |
| Runs | 7 |
| Runs residual | 0.0330623306233 |
| Runs probability | 0.0374618315795 |
| Amino acid sequence | MEGLWWIICKDGQNSLIPAGTYKMPESVKTKLTVLANILPQRRTEAQLFTLQKA |
| Secondary structure | LLLEEEEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLLHHHHHHHHLL |
| PRMN | - |
| PiMo | - |
