Difference between revisions of "ENST00000499583.1"
Line 42: | Line 42: | ||
sequence = <dnaseq>CTTTAGCATCCTCGCCGCGCCCTGAGCGCGCTGGAGGCTCGCAGGCTGCGCCCTCCCAGGGCTGATGCCGCGTCCTGCTCCGCCGTTCTGGGACGTCGGGGACAAAAGTGGAGGAGACGGGAGAGCCCGGGCAGAAAAAGCAGGACGCGCGTCCCAGGATGCTTTCTGTTGCAGACATGATCGCTGGTAACAGATGCCTGGTTCACTCTCATCCTGGCCATACCTGAGGACTATGCTCCTCTTCTAGAAGTTCGGTGCAGTCATCTGACTTAATTGATTCAGCGCATTTATCTGCAGGCTGGAGTACAATAGCACGACATCAGCTCACTGCAACATCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCTTCCCGAGTTGCTGGGATTACAGGCACCTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACTTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCTGTGAGATGGTTTTCTTGGGTAGAATGAAAGAAGCTTGGCTACTGGGTCCATTTTATGTGAACATGTTGCTCCCTATTATAGTCAGTCCCTGGAACCCATTGTAAAGTCAGTTCTGGGTTTTTGCTTAGCTACCATGTAGTAACAGTCACAGCCTGTCTCCTGTCACCCTAACACCATCACCATTGCCAGTGGATATTTTTACCCCTAGTTTATAGTTAGGAAGCCTGAGACCCAGAGGGATTAAAGAGCTTTTCCAAAATCATATGGCTGGCAACACTAGTAATCTGGGCTGCCTGAGTCCTAAACATCATTCTACCCCAGCATTGAATTCCGAGGCCTCTAGAATCTTACCTACCTTCCCTGTTTGAAATGTATTTGTGGGGGAACAATTGACCTCAGAATGAGTAATTTGTCACTACTCTGAGAAAGTTTCACCGAGTTTCACATTTTCCCATTACAAAAGGAAAATGAGAAAATATGTCCTAGATACTACAGAGAAAAATACTTCATTGTCTTAATTGCCTTTCTATTTCAATCAAGGAAGGCATTTAATTATTTCTGAACTACATTCAAAACTCTCTCTCAAGAATATTACTCTCCCCAGGTGAGTTAACCAAAGCTGTGCACAACATTTCTCAATCTGAATAATAACATCAAAAAATTTATTGAGCACTTTTTATATGCCAAACTAGTCAATTCTTTCTGTTTATGACCTCATTGATTCCTCATGGCAAGTTTATGAAGTGGAAGCAATCATTCTCTCTTCTAACAAATGAGGAAACTGAGGCACAGAGGGATGAGATAGTTTGTCTAAGATTGTAAGGCATTAGGTGGTGAAGTCAGCATTGGATCCCAGGCCAAGCCCGAGGCCATCACTCCACCATGCTGCCTCTCAAGAGAAAGATTCAGTTTCCCCTTTGAGATATCCATTTATAAGTACATGTGCCAAAGCAATGTGAAGAAACCAACCCAGATGACTTGATTAAGCTACAGAAGGGACATCTGGGGTCTCAAGCCTCTGGAAATCAAGGTGGAGCATGTAGAGGTTATGGGATCAGGAGAGACAGAGTTTGACTTCTTTGTTTTTTCTTTGAGACCAAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCAATACAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCGGGCTACTGAGTAGCTGGGATTACAGGCGCACGCCATCAGGCCGGCTAATTTTTGTATTTTTAGTAGACACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCGGCCTGGGTTTGACTTCTTAAGCAACCTGAGGAATGATGTCCTTGCTGCTGAGCACAGCTGCCCTGGGCCCTGGAAAACCCACATGACACTCACTCAGCACCCAATGCTGGCTTCATTGTGGCTGTTGGAAACCATGTGGAAAAGAAATAACTTTTTTTGTGATCTGTACGTTATGGCTATTATTTTTTTACCTCGCTTAGCTTTTCAAGAGAATGAAGACCAGTCGACTTAGTATTTGTACTCTGAAATCGAATGGCATGAACACATGTGTTGTATAAGTGAGAAGAAGTATTCTCTTGTGTGATGGACTATAGCCTTCAGAAAGCACCTACTATTAAACAGAATAGAGATTGGATTTTGAAATATGTAGGCCACATCAGTAGGAAAGTTGACACTTCAAATTGCTCACAAGGACTTTAAACTCTACAATAGGTAAAATGTGGAGTACCTTATGTTTTCAGACCAAATGATTTTGTAATTTGAATTCAAAATTTTTTTAGTCTTCACAGTAGTCTTAGCATTAAAAGCATAGTTATTTTTAATATTTTGATAAAATATTCTATTTCATTAATTTTGTATAAGGGCATGTGTGAGAAGCATTGATATTTTTAAAATATAAAAATACAGCCTCTTTCTAATAAGCAAGAGCAATTGTTGATTTTTAAATTTTGTGTTTTTGGAGGCTTCCATTCACAAATCTGATTGTTTAAATAAATCTGTCTCCAGTAAATATGTTGGCACTT</dnaseq>| | sequence = <dnaseq>CTTTAGCATCCTCGCCGCGCCCTGAGCGCGCTGGAGGCTCGCAGGCTGCGCCCTCCCAGGGCTGATGCCGCGTCCTGCTCCGCCGTTCTGGGACGTCGGGGACAAAAGTGGAGGAGACGGGAGAGCCCGGGCAGAAAAAGCAGGACGCGCGTCCCAGGATGCTTTCTGTTGCAGACATGATCGCTGGTAACAGATGCCTGGTTCACTCTCATCCTGGCCATACCTGAGGACTATGCTCCTCTTCTAGAAGTTCGGTGCAGTCATCTGACTTAATTGATTCAGCGCATTTATCTGCAGGCTGGAGTACAATAGCACGACATCAGCTCACTGCAACATCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCTTCCCGAGTTGCTGGGATTACAGGCACCTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACTTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCTGTGAGATGGTTTTCTTGGGTAGAATGAAAGAAGCTTGGCTACTGGGTCCATTTTATGTGAACATGTTGCTCCCTATTATAGTCAGTCCCTGGAACCCATTGTAAAGTCAGTTCTGGGTTTTTGCTTAGCTACCATGTAGTAACAGTCACAGCCTGTCTCCTGTCACCCTAACACCATCACCATTGCCAGTGGATATTTTTACCCCTAGTTTATAGTTAGGAAGCCTGAGACCCAGAGGGATTAAAGAGCTTTTCCAAAATCATATGGCTGGCAACACTAGTAATCTGGGCTGCCTGAGTCCTAAACATCATTCTACCCCAGCATTGAATTCCGAGGCCTCTAGAATCTTACCTACCTTCCCTGTTTGAAATGTATTTGTGGGGGAACAATTGACCTCAGAATGAGTAATTTGTCACTACTCTGAGAAAGTTTCACCGAGTTTCACATTTTCCCATTACAAAAGGAAAATGAGAAAATATGTCCTAGATACTACAGAGAAAAATACTTCATTGTCTTAATTGCCTTTCTATTTCAATCAAGGAAGGCATTTAATTATTTCTGAACTACATTCAAAACTCTCTCTCAAGAATATTACTCTCCCCAGGTGAGTTAACCAAAGCTGTGCACAACATTTCTCAATCTGAATAATAACATCAAAAAATTTATTGAGCACTTTTTATATGCCAAACTAGTCAATTCTTTCTGTTTATGACCTCATTGATTCCTCATGGCAAGTTTATGAAGTGGAAGCAATCATTCTCTCTTCTAACAAATGAGGAAACTGAGGCACAGAGGGATGAGATAGTTTGTCTAAGATTGTAAGGCATTAGGTGGTGAAGTCAGCATTGGATCCCAGGCCAAGCCCGAGGCCATCACTCCACCATGCTGCCTCTCAAGAGAAAGATTCAGTTTCCCCTTTGAGATATCCATTTATAAGTACATGTGCCAAAGCAATGTGAAGAAACCAACCCAGATGACTTGATTAAGCTACAGAAGGGACATCTGGGGTCTCAAGCCTCTGGAAATCAAGGTGGAGCATGTAGAGGTTATGGGATCAGGAGAGACAGAGTTTGACTTCTTTGTTTTTTCTTTGAGACCAAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCAATACAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCGGGCTACTGAGTAGCTGGGATTACAGGCGCACGCCATCAGGCCGGCTAATTTTTGTATTTTTAGTAGACACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCGGCCTGGGTTTGACTTCTTAAGCAACCTGAGGAATGATGTCCTTGCTGCTGAGCACAGCTGCCCTGGGCCCTGGAAAACCCACATGACACTCACTCAGCACCCAATGCTGGCTTCATTGTGGCTGTTGGAAACCATGTGGAAAAGAAATAACTTTTTTTGTGATCTGTACGTTATGGCTATTATTTTTTTACCTCGCTTAGCTTTTCAAGAGAATGAAGACCAGTCGACTTAGTATTTGTACTCTGAAATCGAATGGCATGAACACATGTGTTGTATAAGTGAGAAGAAGTATTCTCTTGTGTGATGGACTATAGCCTTCAGAAAGCACCTACTATTAAACAGAATAGAGATTGGATTTTGAAATATGTAGGCCACATCAGTAGGAAAGTTGACACTTCAAATTGCTCACAAGGACTTTAAACTCTACAATAGGTAAAATGTGGAGTACCTTATGTTTTCAGACCAAATGATTTTGTAATTTGAATTCAAAATTTTTTTAGTCTTCACAGTAGTCTTAGCATTAAAAGCATAGTTATTTTTAATATTTTGATAAAATATTCTATTTCATTAATTTTGTATAAGGGCATGTGTGAGAAGCATTGATATTTTTAAAATATAAAAATACAGCCTCTTTCTAATAAGCAAGAGCAATTGTTGATTTTTAAATTTTGTGTTTTTGGAGGCTTCCATTCACAAATCTGATTGTTTAAATAAATCTGTCTCCAGTAAATATGTTGGCACTT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-UBLCP1-5]] | + | [[Category:Intergenic]][[Category:lnc-UBLCP1-5]][[Category:NONHSAG042077]] |
Revision as of 15:01, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000499583.1 |
Source |
Gencode19 |
Same with |
lnc-UBLCP1-5:3,NONHSAT104813 |
Classification |
intergenic |
Length |
2664 nt |
Genomic location |
chr5+:158527690..158544486 |
Exon number |
3 |
Exons |
158527690..158527846,158538867..158539006,158542120..158544486 |
Genome context |
|
Sequence |
000001 CTTTAGCATC CTCGCCGCGC CCTGAGCGCG CTGGAGGCTC GCAGGCTGCG CCCTCCCAGG GCTGATGCCG CGTCCTGCTC 000080
000081 CGCCGTTCTG GGACGTCGGG GACAAAAGTG GAGGAGACGG GAGAGCCCGG GCAGAAAAAG CAGGACGCGC GTCCCAGGAT 000160 000161 GCTTTCTGTT GCAGACATGA TCGCTGGTAA CAGATGCCTG GTTCACTCTC ATCCTGGCCA TACCTGAGGA CTATGCTCCT 000240 000241 CTTCTAGAAG TTCGGTGCAG TCATCTGACT TAATTGATTC AGCGCATTTA TCTGCAGGCT GGAGTACAAT AGCACGACAT 000320 000321 CAGCTCACTG CAACATCTGC CTCCCGGGTT CAAGCAATTC TCCTGCCTCA GCTTCCCGAG TTGCTGGGAT TACAGGCACC 000400 000401 TGCCACCATG CCCAGCTAAT TTTTGTATTT TTAGTAGAGA TGGGGTTTCA CCATGTTGGT CAGGCTGGTC TTGAACTCCT 000480 000481 GACCTCAGGT GATCCACTTG CCTCGGCCTC CCAAAGTGCT GGGATTACAG GTGTGAGCCA CCGCACCTGG CCTGTGAGAT 000560 000561 GGTTTTCTTG GGTAGAATGA AAGAAGCTTG GCTACTGGGT CCATTTTATG TGAACATGTT GCTCCCTATT ATAGTCAGTC 000640 000641 CCTGGAACCC ATTGTAAAGT CAGTTCTGGG TTTTTGCTTA GCTACCATGT AGTAACAGTC ACAGCCTGTC TCCTGTCACC 000720 000721 CTAACACCAT CACCATTGCC AGTGGATATT TTTACCCCTA GTTTATAGTT AGGAAGCCTG AGACCCAGAG GGATTAAAGA 000800 000801 GCTTTTCCAA AATCATATGG CTGGCAACAC TAGTAATCTG GGCTGCCTGA GTCCTAAACA TCATTCTACC CCAGCATTGA 000880 000881 ATTCCGAGGC CTCTAGAATC TTACCTACCT TCCCTGTTTG AAATGTATTT GTGGGGGAAC AATTGACCTC AGAATGAGTA 000960 000961 ATTTGTCACT ACTCTGAGAA AGTTTCACCG AGTTTCACAT TTTCCCATTA CAAAAGGAAA ATGAGAAAAT ATGTCCTAGA 001040 001041 TACTACAGAG AAAAATACTT CATTGTCTTA ATTGCCTTTC TATTTCAATC AAGGAAGGCA TTTAATTATT TCTGAACTAC 001120 001121 ATTCAAAACT CTCTCTCAAG AATATTACTC TCCCCAGGTG AGTTAACCAA AGCTGTGCAC AACATTTCTC AATCTGAATA 001200 001201 ATAACATCAA AAAATTTATT GAGCACTTTT TATATGCCAA ACTAGTCAAT TCTTTCTGTT TATGACCTCA TTGATTCCTC 001280 001281 ATGGCAAGTT TATGAAGTGG AAGCAATCAT TCTCTCTTCT AACAAATGAG GAAACTGAGG CACAGAGGGA TGAGATAGTT 001360 001361 TGTCTAAGAT TGTAAGGCAT TAGGTGGTGA AGTCAGCATT GGATCCCAGG CCAAGCCCGA GGCCATCACT CCACCATGCT 001440 001441 GCCTCTCAAG AGAAAGATTC AGTTTCCCCT TTGAGATATC CATTTATAAG TACATGTGCC AAAGCAATGT GAAGAAACCA 001520 001521 ACCCAGATGA CTTGATTAAG CTACAGAAGG GACATCTGGG GTCTCAAGCC TCTGGAAATC AAGGTGGAGC ATGTAGAGGT 001600 001601 TATGGGATCA GGAGAGACAG AGTTTGACTT CTTTGTTTTT TCTTTGAGAC CAAGTCTTGC TCTGTTGCCC AGGCTGGAGT 001680 001681 GCAGTGGTGT GATCTTGGCT CAATACAACC TCCACCTCCT GGGTTCAAGT GATTCTCCTG CCTCGGGCTA CTGAGTAGCT 001760 001761 GGGATTACAG GCGCACGCCA TCAGGCCGGC TAATTTTTGT ATTTTTAGTA GACACGGGGT TTCACCATGT TGGTCAGGCT 001840 001841 GGTCTCGAAC TCCTGACCTC GTGATCCACC TGCCTCGGCC TCCCAAAGTG CTGGGATTAC AGGCATGAGC CACCGTGCCC 001920 001921 GGCCTGGGTT TGACTTCTTA AGCAACCTGA GGAATGATGT CCTTGCTGCT GAGCACAGCT GCCCTGGGCC CTGGAAAACC 002000 002001 CACATGACAC TCACTCAGCA CCCAATGCTG GCTTCATTGT GGCTGTTGGA AACCATGTGG AAAAGAAATA ACTTTTTTTG 002080 002081 TGATCTGTAC GTTATGGCTA TTATTTTTTT ACCTCGCTTA GCTTTTCAAG AGAATGAAGA CCAGTCGACT TAGTATTTGT 002160 002161 ACTCTGAAAT CGAATGGCAT GAACACATGT GTTGTATAAG TGAGAAGAAG TATTCTCTTG TGTGATGGAC TATAGCCTTC 002240 002241 AGAAAGCACC TACTATTAAA CAGAATAGAG ATTGGATTTT GAAATATGTA GGCCACATCA GTAGGAAAGT TGACACTTCA 002320 002321 AATTGCTCAC AAGGACTTTA AACTCTACAA TAGGTAAAAT GTGGAGTACC TTATGTTTTC AGACCAAATG ATTTTGTAAT 002400 002401 TTGAATTCAA AATTTTTTTA GTCTTCACAG TAGTCTTAGC ATTAAAAGCA TAGTTATTTT TAATATTTTG ATAAAATATT 002480 002481 CTATTTCATT AATTTTGTAT AAGGGCATGT GTGAGAAGCA TTGATATTTT TAAAATATAA AAATACAGCC TCTTTCTAAT 002560 002561 AAGCAAGAGC AATTGTTGAT TTTTAAATTT TGTGTTTTTG GAGGCTTCCA TTCACAAATC TGATTGTTTA AATAAATCTG 002640 002641 TCTCCAGTAA ATATGTTGGC ACTT |