Difference between revisions of "ENST00000579896.1"

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sequence = <dnaseq>ATAAGAAGAGAGCTTCTCTTCCTCCTCTGGACGCTGTCCTGTGTGTAGCACTCAGGACTGCTGAAGACATCTAGGTAACAGCTTGAAGGTGAAACCAGCACTGAGGTTTCCTGATTCCTGGGTGGAGCGCAGACTGGAGCCTAAGCCCTGACAGCATGGGACTTGCAGCTCAAGTATATCTGTGCTTCACTGGAAGAGTTGAAAGAGCTGGAGACTGTCTGTGATCAATGAGCCCCTGTCACTCTCATGACACTTTCCTGAACCATTTCACCAGCACTCAGGCAGAAGAGGAGGACAGCAGGTGAAGTCAGAGAGATTCAAAGCACAAGGATTCAACTTTCTGTTGCTGGCCTTGAAGATGCAGGAGGCCATGAGCCAAGGAATGCAAGCAGCCTCTGGAAGTTGAAAACGACCTAAGTGCTCAGTCCTACAGCTGCATGGAACTGAAATCTGCCAACACCCTGAGTGATCCGGAAGTGGATTTTCTCCCAAAGCCTCCTGATAGGAGCCCCAGCCAGCTGACAGATTGACTTCAGCACTATGACATCAAAGAGCCCACCCAAGGCTGTTACTGGAAGG</dnaseq>|
 
sequence = <dnaseq>ATAAGAAGAGAGCTTCTCTTCCTCCTCTGGACGCTGTCCTGTGTGTAGCACTCAGGACTGCTGAAGACATCTAGGTAACAGCTTGAAGGTGAAACCAGCACTGAGGTTTCCTGATTCCTGGGTGGAGCGCAGACTGGAGCCTAAGCCCTGACAGCATGGGACTTGCAGCTCAAGTATATCTGTGCTTCACTGGAAGAGTTGAAAGAGCTGGAGACTGTCTGTGATCAATGAGCCCCTGTCACTCTCATGACACTTTCCTGAACCATTTCACCAGCACTCAGGCAGAAGAGGAGGACAGCAGGTGAAGTCAGAGAGATTCAAAGCACAAGGATTCAACTTTCTGTTGCTGGCCTTGAAGATGCAGGAGGCCATGAGCCAAGGAATGCAAGCAGCCTCTGGAAGTTGAAAACGACCTAAGTGCTCAGTCCTACAGCTGCATGGAACTGAAATCTGCCAACACCCTGAGTGATCCGGAAGTGGATTTTCTCCCAAAGCCTCCTGATAGGAGCCCCAGCCAGCTGACAGATTGACTTCAGCACTATGACATCAAAGAGCCCACCCAAGGCTGTTACTGGAAGG</dnaseq>|
 
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[[Category:Intronic(AS)]][[Category:lnc-SPACA3-3]][[Category:NONHSAG021502]]
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[[Category:Intronic(AS)]][[Category:lnc-SPACA3-3]][[Category:NONHSAG021502]][[Category:ENSG00000265125.1]]

Revision as of 18:20, 15 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000579896.1

Source

Gencode19

Same with

lnc-SPACA3-3:1,NONHSAT052986

Classification

intronic(AS)

Length

579 nt

Genomic location

chr17+:31892783..31908472

Exon number

3

Exons

31892783..31892940,31896354..31896476,31908175..31908472

Genome context

Sequence
000001 ATAAGAAGAG AGCTTCTCTT CCTCCTCTGG ACGCTGTCCT GTGTGTAGCA CTCAGGACTG CTGAAGACAT CTAGGTAACA 000080
000081 GCTTGAAGGT GAAACCAGCA CTGAGGTTTC CTGATTCCTG GGTGGAGCGC AGACTGGAGC CTAAGCCCTG ACAGCATGGG 000160
000161 ACTTGCAGCT CAAGTATATC TGTGCTTCAC TGGAAGAGTT GAAAGAGCTG GAGACTGTCT GTGATCAATG AGCCCCTGTC 000240
000241 ACTCTCATGA CACTTTCCTG AACCATTTCA CCAGCACTCA GGCAGAAGAG GAGGACAGCA GGTGAAGTCA GAGAGATTCA 000320
000321 AAGCACAAGG ATTCAACTTT CTGTTGCTGG CCTTGAAGAT GCAGGAGGCC ATGAGCCAAG GAATGCAAGC AGCCTCTGGA 000400
000401 AGTTGAAAAC GACCTAAGTG CTCAGTCCTA CAGCTGCATG GAACTGAAAT CTGCCAACAC CCTGAGTGAT CCGGAAGTGG 000480
000481 ATTTTCTCCC AAAGCCTCCT GATAGGAGCC CCAGCCAGCT GACAGATTGA CTTCAGCACT ATGACATCAA AGAGCCCACC 000560
000561 CAAGGCTGTT ACTGGAAGG
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