Difference between revisions of "ENST00000430192.1"

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sequence = <dnaseq>GGTTCAAAGAGAAAAAGCACGTGATAACTTTGAAGGAGGCTGCCTGGCTGAGCTGATCGGATCACCTAGAGACTGGAAATGCTTTCTGGTCTGAAGTCACCTGCCCTATCTGGACATTCCATAGACTACCACTTTTACCCACGACTTCGATGTGGCATGCTCATTGGACCAGATAAGCAAGCAGTGGCAAGTGGATTGGAGGTCTTGGAATATGAAGGCCTGGCCCTCGTCTCAGCTTGGAATAAATCTGAAGGCCCATCACAGCTTCAGAGATGCTTGGAGAAGGCTGAGGTCTCCCCTGTAACCTTATGAGAACCTTGAGTTGTTGAACTCATTAATTCTTTGGGACCATCTTCCTGATGTTCAAGTTTGTGAAACAGGCTTTCCCTTTAAGATTTGTTTTCCTCAAAATACAAGACTATTGATGCTTCAGTTTTGAAGTGGATTCTGCACTCAAGAAATGTACCATTGAAGAATGGGACTGGTAGGAAGGGAAAAAAACTAAAAGGAAACGCATTTTCGAGTTGCACATCATGATCAGGCACAGAGTCCAGATACACTTGGAGTAGCAAGCATCCATCCTTGTGGAGACGCACATGAACCAGGACTCTCTGCACCCACCCCTCTCAAGTTTTATTTTCCGACGGCTGTAATGTTCCAGGACACCTGCCATCATGGAGGGTTATCCAGCACCTGGAGGATACCTGCTACCTATTTTGTGAACAATTTGGCATGAGGAGAGAAAGGAACCTGAAGTTTTTAGCAAGGAAGCTTCCTGTCTCCAAGGGGATTTTTTCCCACAGAAATATATTGCTGATTGGATGTTGCCTCTCTAATTTTGGAGACCATATGTTCTAGGTATTCCGGGAAAAATCTGCATTTCAAATCCTGGATCCATTGTTCCCAAAAGCCATGTAAGAATCCCAACAGAGATAGGTCCCTCTCATGGATATGTCCTATGTCCCAGGGATACCGCTCAAAGCATTTTGTGGCTGAAGACATTTAATCTTTCATAGAAACTCCTGAAGAAGATGTTATTGCTATTATAATCATATGTATTTGGAAATGAAGACTTTGAAAGGTTCTAACTTATTCAACATTTCTCAACCAGCATGTGGCAAAGTTCTGAAAGTCTGTTATTCTAACCAACATCCTACCTTGAGGAGCAATGATGTTCACCTGTCTGGTTGCCACAACTCACGTCCTTCTGTGGGCAGCAGAGTTCCAAGACGTTCCCCAAGATCTCATTTTCTGGAGGTGCATGTCTCCCGTGACCCCCTCTTTGGATTGCCCGCAGAGCCCGTGAAGATGGTGTTATCACTCCTGTGATTACTTTACTGATCAGGTGACTTTGAGTCAATCAAAAGGTAGATTATCCAGGTGTGCCTGATTTGATCAGGTGGTCCCTTAAGGAGGCTTAAAATGACCCTTTCTGAAGTAGAGTAATTGGAAAAGTAAGAGGGTCTATGGGTGGGGTCACCTGGCAAGGAACTGAACTCAGCCTCCATGAGCTCTGGCCACCAGCTGACCTTTAGCAAGAAAGCAAATCTTTCTTTGGTCAGTCTCCACAACAGGACGAAGCTGGCTGAGCCCTTGCCTTTGGCCCTGTGAGATGCTGACCCGAGTATCCAGCGAACACGTGCCAGAGTCCTGACCCATGGAAACTGAGATGATGAGTCTGTGTTGCTTTAAGCCACTGTGTCTACAGTAATTGGTTAGACAGCAATAGAAAACTAATAAACCTCCCTCTTTTTCATTTA</dnaseq>|
 
sequence = <dnaseq>GGTTCAAAGAGAAAAAGCACGTGATAACTTTGAAGGAGGCTGCCTGGCTGAGCTGATCGGATCACCTAGAGACTGGAAATGCTTTCTGGTCTGAAGTCACCTGCCCTATCTGGACATTCCATAGACTACCACTTTTACCCACGACTTCGATGTGGCATGCTCATTGGACCAGATAAGCAAGCAGTGGCAAGTGGATTGGAGGTCTTGGAATATGAAGGCCTGGCCCTCGTCTCAGCTTGGAATAAATCTGAAGGCCCATCACAGCTTCAGAGATGCTTGGAGAAGGCTGAGGTCTCCCCTGTAACCTTATGAGAACCTTGAGTTGTTGAACTCATTAATTCTTTGGGACCATCTTCCTGATGTTCAAGTTTGTGAAACAGGCTTTCCCTTTAAGATTTGTTTTCCTCAAAATACAAGACTATTGATGCTTCAGTTTTGAAGTGGATTCTGCACTCAAGAAATGTACCATTGAAGAATGGGACTGGTAGGAAGGGAAAAAAACTAAAAGGAAACGCATTTTCGAGTTGCACATCATGATCAGGCACAGAGTCCAGATACACTTGGAGTAGCAAGCATCCATCCTTGTGGAGACGCACATGAACCAGGACTCTCTGCACCCACCCCTCTCAAGTTTTATTTTCCGACGGCTGTAATGTTCCAGGACACCTGCCATCATGGAGGGTTATCCAGCACCTGGAGGATACCTGCTACCTATTTTGTGAACAATTTGGCATGAGGAGAGAAAGGAACCTGAAGTTTTTAGCAAGGAAGCTTCCTGTCTCCAAGGGGATTTTTTCCCACAGAAATATATTGCTGATTGGATGTTGCCTCTCTAATTTTGGAGACCATATGTTCTAGGTATTCCGGGAAAAATCTGCATTTCAAATCCTGGATCCATTGTTCCCAAAAGCCATGTAAGAATCCCAACAGAGATAGGTCCCTCTCATGGATATGTCCTATGTCCCAGGGATACCGCTCAAAGCATTTTGTGGCTGAAGACATTTAATCTTTCATAGAAACTCCTGAAGAAGATGTTATTGCTATTATAATCATATGTATTTGGAAATGAAGACTTTGAAAGGTTCTAACTTATTCAACATTTCTCAACCAGCATGTGGCAAAGTTCTGAAAGTCTGTTATTCTAACCAACATCCTACCTTGAGGAGCAATGATGTTCACCTGTCTGGTTGCCACAACTCACGTCCTTCTGTGGGCAGCAGAGTTCCAAGACGTTCCCCAAGATCTCATTTTCTGGAGGTGCATGTCTCCCGTGACCCCCTCTTTGGATTGCCCGCAGAGCCCGTGAAGATGGTGTTATCACTCCTGTGATTACTTTACTGATCAGGTGACTTTGAGTCAATCAAAAGGTAGATTATCCAGGTGTGCCTGATTTGATCAGGTGGTCCCTTAAGGAGGCTTAAAATGACCCTTTCTGAAGTAGAGTAATTGGAAAAGTAAGAGGGTCTATGGGTGGGGTCACCTGGCAAGGAACTGAACTCAGCCTCCATGAGCTCTGGCCACCAGCTGACCTTTAGCAAGAAAGCAAATCTTTCTTTGGTCAGTCTCCACAACAGGACGAAGCTGGCTGAGCCCTTGCCTTTGGCCCTGTGAGATGCTGACCCGAGTATCCAGCGAACACGTGCCAGAGTCCTGACCCATGGAAACTGAGATGATGAGTCTGTGTTGCTTTAAGCCACTGTGTCTACAGTAATTGGTTAGACAGCAATAGAAAACTAATAAACCTCCCTCTTTTTCATTTA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-KIDINS220-6]][[Category:NONHSAG026925]]
+
[[Category:Intergenic]][[Category:lnc-KIDINS220-6]][[Category:NONHSAG026925]][[Category:Transcripts]]

Revision as of 10:29, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000430192.1

Source

Gencode19

Same with

lnc-KIDINS220-6:6,NONHSAT147072

Classification

intergenic

Length

1760 nt

Genomic location

chr2-:8147901..8464760

Exon number

8

Exons

8147901..8148889,8200478..8200535,8427468..8427688,8434742..8434816,8434904..8435009,8436970..8437073,8439806..8439923,8464672..8464760

Genome context

Sequence
000001 GGTTCAAAGA GAAAAAGCAC GTGATAACTT TGAAGGAGGC TGCCTGGCTG AGCTGATCGG ATCACCTAGA GACTGGAAAT 000080
000081 GCTTTCTGGT CTGAAGTCAC CTGCCCTATC TGGACATTCC ATAGACTACC ACTTTTACCC ACGACTTCGA TGTGGCATGC 000160
000161 TCATTGGACC AGATAAGCAA GCAGTGGCAA GTGGATTGGA GGTCTTGGAA TATGAAGGCC TGGCCCTCGT CTCAGCTTGG 000240
000241 AATAAATCTG AAGGCCCATC ACAGCTTCAG AGATGCTTGG AGAAGGCTGA GGTCTCCCCT GTAACCTTAT GAGAACCTTG 000320
000321 AGTTGTTGAA CTCATTAATT CTTTGGGACC ATCTTCCTGA TGTTCAAGTT TGTGAAACAG GCTTTCCCTT TAAGATTTGT 000400
000401 TTTCCTCAAA ATACAAGACT ATTGATGCTT CAGTTTTGAA GTGGATTCTG CACTCAAGAA ATGTACCATT GAAGAATGGG 000480
000481 ACTGGTAGGA AGGGAAAAAA ACTAAAAGGA AACGCATTTT CGAGTTGCAC ATCATGATCA GGCACAGAGT CCAGATACAC 000560
000561 TTGGAGTAGC AAGCATCCAT CCTTGTGGAG ACGCACATGA ACCAGGACTC TCTGCACCCA CCCCTCTCAA GTTTTATTTT 000640
000641 CCGACGGCTG TAATGTTCCA GGACACCTGC CATCATGGAG GGTTATCCAG CACCTGGAGG ATACCTGCTA CCTATTTTGT 000720
000721 GAACAATTTG GCATGAGGAG AGAAAGGAAC CTGAAGTTTT TAGCAAGGAA GCTTCCTGTC TCCAAGGGGA TTTTTTCCCA 000800
000801 CAGAAATATA TTGCTGATTG GATGTTGCCT CTCTAATTTT GGAGACCATA TGTTCTAGGT ATTCCGGGAA AAATCTGCAT 000880
000881 TTCAAATCCT GGATCCATTG TTCCCAAAAG CCATGTAAGA ATCCCAACAG AGATAGGTCC CTCTCATGGA TATGTCCTAT 000960
000961 GTCCCAGGGA TACCGCTCAA AGCATTTTGT GGCTGAAGAC ATTTAATCTT TCATAGAAAC TCCTGAAGAA GATGTTATTG 001040
001041 CTATTATAAT CATATGTATT TGGAAATGAA GACTTTGAAA GGTTCTAACT TATTCAACAT TTCTCAACCA GCATGTGGCA 001120
001121 AAGTTCTGAA AGTCTGTTAT TCTAACCAAC ATCCTACCTT GAGGAGCAAT GATGTTCACC TGTCTGGTTG CCACAACTCA 001200
001201 CGTCCTTCTG TGGGCAGCAG AGTTCCAAGA CGTTCCCCAA GATCTCATTT TCTGGAGGTG CATGTCTCCC GTGACCCCCT 001280
001281 CTTTGGATTG CCCGCAGAGC CCGTGAAGAT GGTGTTATCA CTCCTGTGAT TACTTTACTG ATCAGGTGAC TTTGAGTCAA 001360
001361 TCAAAAGGTA GATTATCCAG GTGTGCCTGA TTTGATCAGG TGGTCCCTTA AGGAGGCTTA AAATGACCCT TTCTGAAGTA 001440
001441 GAGTAATTGG AAAAGTAAGA GGGTCTATGG GTGGGGTCAC CTGGCAAGGA ACTGAACTCA GCCTCCATGA GCTCTGGCCA 001520
001521 CCAGCTGACC TTTAGCAAGA AAGCAAATCT TTCTTTGGTC AGTCTCCACA ACAGGACGAA GCTGGCTGAG CCCTTGCCTT 001600
001601 TGGCCCTGTG AGATGCTGAC CCGAGTATCC AGCGAACACG TGCCAGAGTC CTGACCCATG GAAACTGAGA TGATGAGTCT 001680
001681 GTGTTGCTTT AAGCCACTGT GTCTACAGTA ATTGGTTAGA CAGCAATAGA AAACTAATAA ACCTCCCTCT TTTTCATTTA 001760
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