Difference between revisions of "ENST00000449259.1"
Line 42: | Line 42: | ||
sequence = <dnaseq>AGGACTTCTCCAGCTCCATTTACAGTCTGGCTCCTGGGCCTTTGGATCCCAGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGATCAGCCCTAGAAGCTGTCACTACATCTCCAACGGACGCAACTATTTTCCAGGAACACCGGGGGAGAGAGCCAACAACAGCACAGTGGCCCCGGACCGTGACCCTTGGACTGAAGGAACCTACAGATGTGGTTTTTTTTGGTGACATTTTACATGCAACTCCAGATTTCAAACTCTTTTGGAGAAGCAGGCAATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACAGCTGCCACCTTCCGAGGGGCACGGTGGATGCCCTGTTCTGCCAGAATTGCCAACACGTTTATCGTCTTAGACTTGCCCAAGGTGTCGCAGTTAGAGACTGCCTCCCTTATTCACGCTCCTGCCTGGTGCCCGTGGGCTTGAATTTGCTCCCCTTGGAGTGGGGTGAGGCTCTGCAGACACTTCTCATACACCTCCCCTGCAGACAGCAAGCTCCTGGAACACAAGTCACATGCATTTCATTTCCTGCTCTCTTGCTACCACCCAACATGGGCTCTCAATACATGTTGAAAGCAAGGATCAATGAATAAATGGGCAACTATCAGCTGTAGACTTGTATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGGGAGTTCATGACATAGTGAGGGAAAGAAAAAGCTTATGCAGTGTGTGTGTGAAACTTTAAGCAAACATGGTGCATAACAATAACAGGAATGACTTTGCCTGCCCCTGATGAAACTTCAGCAGGGCTATGCCCTGTCTTGCCACCTTTAGGAAACAGCAGTCTTATAGTCCTTTGCCCCTCTGAGTTACAACCACTGTCTCCTTTCAGGAGAATGCCCAGTGTTATATCATAATCAAGGCTTTGAACTTGATGTGGCATTACATGTTCTTCCATCTCCCCAGCCACCTGAGAAGGGAGATGGGGTAGCTTTTCTCTCTCACTCTCTCTCCCCCAACCCCTCCTTTTCCCACCGGCAGGTGAATGAGCTTCCTGCCCATAGGAGAAAGGGTAAAATCACAAGGTGGTGCCCTTGTCTCCAAATCTCAAGGTCCTCTGGATGGCAGGTGAGTAAAGGTGACTCTTGTGATTATGGGTGTTTTGGGTGTTCCTCAGAGATCCCCCAAACTGGGGTCTTGTCCACCATTCCCAGGACTCTGCCATGTGGAGCCATGGGAATGTGAAGTTCACCTCACACTTCCTTTCAGCTGAGGTCACCACACAGCCCCTACCAGCCCGGCTATATTGGGTGGGATTTCAGATGCCCCCACAATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGGAGGGCAATTCCTCCTCTCTCTCTGCCTGGCCCCAGGCTGCTTCCACTGTCTCAGAAACTGGTCCCCGGATTCCCCCAGTTACAGAGAACCCTCATCAAGCTCTCAAGTGGCCACTGAAACCCAGGCTCTCTAGGCTCTGGAGTATGGAAGTGACAGCTCCATTTAATTTCTCCTTTCCTCTTGTAGGCTTACAGCATAGCACTCTCCCAAGAAATCATCCAAAAATTACCTCAACCATTCTATAGACCCCAAGCTGACCAGGGGAGGGAGGACCAAGAATCTTGAAACGTAAATACTACATTTGATGGTCTCCTTCAGACTTATTTTGGGATCTGATATCTCTTTAACAAAAATTATAAAAATTGAGGCAAAGAGAGCCCCATTTTTTATATACTGTTCTAATAAATAACAGGTACCCTTAGAAGAATGCAGACAAACACTCCTATGGAAATTTAAAGGAGCATAAGACTTCTTGCAGTATAGGGAGAGAACCAAGGAAGACTTCCTGGAGGAAATGGCCATTGAACTGGGCCTTGGACATGTGGAGGTGAGGGATGAGAGTATTCCAGATGAAGAGTCCAGCATAGGGAAGGCCCACAGGAAGGAATTGTGCTGTATTAATGCTGTCTTAGAGGCATTTCCATTGCCAGACACAGATACTCAAATTACTTCAGAGAGAGAGAGAGAGAGTATTGAAAGGGTTTCTGTGAATACCTCCACAACTGTGGTTCTCAAAGTGTAATCCCTGGGCCAGCAGCATCGGCATCACCTGGGAACTTGTTAGAAATGCAGATTCCCAGGCTGGGTGCAGTGGCTCACGCCTGTAACCCTAGCACTTTGGGAGTCCGAGGTGGGTGGATCACCTGAGGTTGGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAAAAGCCAGGTGTGGTGGCGCATGCCTGTAATCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCGGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGGTAACAAGAGCGAAACTCCACCGAAGAAAGAAGAGAGAGAGAGAGGGAGAAAGAAAGAAAGGAGAAAGAGAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAAGAAAAAAGAAAGGAAAAGAAAAGGCAAATTCACCAGAGCCTTTGAATCAGAAAAGAACCCCCAGGGGCTGGTGGTAGCAGTCCTTGCACAGGCCCTCCAGGTGATTCTCATCCAGGGAAGCCTGCGAGCCCTTGAGGTGGAATATTCTCAGGAATCCCTGAGATATGTGAAGAACTGATGGCATAGGCTATTTCTAGGGAGGAAATGGGGCTGCTGGGTGCACAGATGAGGGGAGGTGGGAGACCTCTGTAATTGTGTACCATGTGCATATATTACCTATTCAGAGAATAATAAAACAATGCGTTTAATCCCC</dnaseq>| | sequence = <dnaseq>AGGACTTCTCCAGCTCCATTTACAGTCTGGCTCCTGGGCCTTTGGATCCCAGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGATCAGCCCTAGAAGCTGTCACTACATCTCCAACGGACGCAACTATTTTCCAGGAACACCGGGGGAGAGAGCCAACAACAGCACAGTGGCCCCGGACCGTGACCCTTGGACTGAAGGAACCTACAGATGTGGTTTTTTTTGGTGACATTTTACATGCAACTCCAGATTTCAAACTCTTTTGGAGAAGCAGGCAATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACAGCTGCCACCTTCCGAGGGGCACGGTGGATGCCCTGTTCTGCCAGAATTGCCAACACGTTTATCGTCTTAGACTTGCCCAAGGTGTCGCAGTTAGAGACTGCCTCCCTTATTCACGCTCCTGCCTGGTGCCCGTGGGCTTGAATTTGCTCCCCTTGGAGTGGGGTGAGGCTCTGCAGACACTTCTCATACACCTCCCCTGCAGACAGCAAGCTCCTGGAACACAAGTCACATGCATTTCATTTCCTGCTCTCTTGCTACCACCCAACATGGGCTCTCAATACATGTTGAAAGCAAGGATCAATGAATAAATGGGCAACTATCAGCTGTAGACTTGTATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGGGAGTTCATGACATAGTGAGGGAAAGAAAAAGCTTATGCAGTGTGTGTGTGAAACTTTAAGCAAACATGGTGCATAACAATAACAGGAATGACTTTGCCTGCCCCTGATGAAACTTCAGCAGGGCTATGCCCTGTCTTGCCACCTTTAGGAAACAGCAGTCTTATAGTCCTTTGCCCCTCTGAGTTACAACCACTGTCTCCTTTCAGGAGAATGCCCAGTGTTATATCATAATCAAGGCTTTGAACTTGATGTGGCATTACATGTTCTTCCATCTCCCCAGCCACCTGAGAAGGGAGATGGGGTAGCTTTTCTCTCTCACTCTCTCTCCCCCAACCCCTCCTTTTCCCACCGGCAGGTGAATGAGCTTCCTGCCCATAGGAGAAAGGGTAAAATCACAAGGTGGTGCCCTTGTCTCCAAATCTCAAGGTCCTCTGGATGGCAGGTGAGTAAAGGTGACTCTTGTGATTATGGGTGTTTTGGGTGTTCCTCAGAGATCCCCCAAACTGGGGTCTTGTCCACCATTCCCAGGACTCTGCCATGTGGAGCCATGGGAATGTGAAGTTCACCTCACACTTCCTTTCAGCTGAGGTCACCACACAGCCCCTACCAGCCCGGCTATATTGGGTGGGATTTCAGATGCCCCCACAATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGGAGGGCAATTCCTCCTCTCTCTCTGCCTGGCCCCAGGCTGCTTCCACTGTCTCAGAAACTGGTCCCCGGATTCCCCCAGTTACAGAGAACCCTCATCAAGCTCTCAAGTGGCCACTGAAACCCAGGCTCTCTAGGCTCTGGAGTATGGAAGTGACAGCTCCATTTAATTTCTCCTTTCCTCTTGTAGGCTTACAGCATAGCACTCTCCCAAGAAATCATCCAAAAATTACCTCAACCATTCTATAGACCCCAAGCTGACCAGGGGAGGGAGGACCAAGAATCTTGAAACGTAAATACTACATTTGATGGTCTCCTTCAGACTTATTTTGGGATCTGATATCTCTTTAACAAAAATTATAAAAATTGAGGCAAAGAGAGCCCCATTTTTTATATACTGTTCTAATAAATAACAGGTACCCTTAGAAGAATGCAGACAAACACTCCTATGGAAATTTAAAGGAGCATAAGACTTCTTGCAGTATAGGGAGAGAACCAAGGAAGACTTCCTGGAGGAAATGGCCATTGAACTGGGCCTTGGACATGTGGAGGTGAGGGATGAGAGTATTCCAGATGAAGAGTCCAGCATAGGGAAGGCCCACAGGAAGGAATTGTGCTGTATTAATGCTGTCTTAGAGGCATTTCCATTGCCAGACACAGATACTCAAATTACTTCAGAGAGAGAGAGAGAGAGTATTGAAAGGGTTTCTGTGAATACCTCCACAACTGTGGTTCTCAAAGTGTAATCCCTGGGCCAGCAGCATCGGCATCACCTGGGAACTTGTTAGAAATGCAGATTCCCAGGCTGGGTGCAGTGGCTCACGCCTGTAACCCTAGCACTTTGGGAGTCCGAGGTGGGTGGATCACCTGAGGTTGGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAAAAGCCAGGTGTGGTGGCGCATGCCTGTAATCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCGGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGGTAACAAGAGCGAAACTCCACCGAAGAAAGAAGAGAGAGAGAGAGGGAGAAAGAAAGAAAGGAGAAAGAGAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAAGAAAAAAGAAAGGAAAAGAAAAGGCAAATTCACCAGAGCCTTTGAATCAGAAAAGAACCCCCAGGGGCTGGTGGTAGCAGTCCTTGCACAGGCCCTCCAGGTGATTCTCATCCAGGGAAGCCTGCGAGCCCTTGAGGTGGAATATTCTCAGGAATCCCTGAGATATGTGAAGAACTGATGGCATAGGCTATTTCTAGGGAGGAAATGGGGCTGCTGGGTGCACAGATGAGGGGAGGTGGGAGACCTCTGTAATTGTGTACCATGTGCATATATTACCTATTCAGAGAATAATAAAACAATGCGTTTAATCCCC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-SERTAD2-3]][[Category:NONHSAG027974]] | + | [[Category:Intergenic]][[Category:lnc-SERTAD2-3]][[Category:NONHSAG027974]][[Category:Transcripts]] |
Revision as of 10:44, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000449259.1 |
Source |
Gencode19 |
Same with |
lnc-SERTAD2-3:1,NONHSAT071138 |
Classification |
intergenic |
Length |
2928 nt |
Genomic location |
chr2-:65128974..65132271 |
Exon number |
2 |
Exons |
65128974..65131754,65132125..65132271 |
Genome context |
|
Sequence |
000001 AGGACTTCTC CAGCTCCATT TACAGTCTGG CTCCTGGGCC TTTGGATCCC AGCAGTGTCC GAGCAGGAGC TCAAAGGACA 000080 000081 GCCCCACCAT GGGGGATCAG CCCTAGAAGC TGTCACTACA TCTCCAACGG ACGCAACTAT TTTCCAGGAA CACCGGGGGA 000160 000161 GAGAGCCAAC AACAGCACAG TGGCCCCGGA CCGTGACCCT TGGACTGAAG GAACCTACAG ATGTGGTTTT TTTTGGTGAC 000240 000241 ATTTTACATG CAACTCCAGA TTTCAAACTC TTTTGGAGAA GCAGGCAATC TGGCAACAGT CGTTTTGGAT TCTCAGAAGG 000320 000321 CAATAAAGAA CAGCTGCCAC CTTCCGAGGG GCACGGTGGA TGCCCTGTTC TGCCAGAATT GCCAACACGT TTATCGTCTT 000400 000401 AGACTTGCCC AAGGTGTCGC AGTTAGAGAC TGCCTCCCTT ATTCACGCTC CTGCCTGGTG CCCGTGGGCT TGAATTTGCT 000480 000481 CCCCTTGGAG TGGGGTGAGG CTCTGCAGAC ACTTCTCATA CACCTCCCCT GCAGACAGCA AGCTCCTGGA ACACAAGTCA 000560 000561 CATGCATTTC ATTTCCTGCT CTCTTGCTAC CACCCAACAT GGGCTCTCAA TACATGTTGA AAGCAAGGAT CAATGAATAA 000640 000641 ATGGGCAACT ATCAGCTGTA GACTTGTATG TGCCAGGTAT GGTGCTAGGC ATGCTAGGCA CCAAAAGGGC CACAGAGGTG 000720 000721 TTACATGCCA GGATATCAGG GAGTTCATGA CATAGTGAGG GAAAGAAAAA GCTTATGCAG TGTGTGTGTG AAACTTTAAG 000800 000801 CAAACATGGT GCATAACAAT AACAGGAATG ACTTTGCCTG CCCCTGATGA AACTTCAGCA GGGCTATGCC CTGTCTTGCC 000880 000881 ACCTTTAGGA AACAGCAGTC TTATAGTCCT TTGCCCCTCT GAGTTACAAC CACTGTCTCC TTTCAGGAGA ATGCCCAGTG 000960 000961 TTATATCATA ATCAAGGCTT TGAACTTGAT GTGGCATTAC ATGTTCTTCC ATCTCCCCAG CCACCTGAGA AGGGAGATGG 001040 001041 GGTAGCTTTT CTCTCTCACT CTCTCTCCCC CAACCCCTCC TTTTCCCACC GGCAGGTGAA TGAGCTTCCT GCCCATAGGA 001120 001121 GAAAGGGTAA AATCACAAGG TGGTGCCCTT GTCTCCAAAT CTCAAGGTCC TCTGGATGGC AGGTGAGTAA AGGTGACTCT 001200 001201 TGTGATTATG GGTGTTTTGG GTGTTCCTCA GAGATCCCCC AAACTGGGGT CTTGTCCACC ATTCCCAGGA CTCTGCCATG 001280 001281 TGGAGCCATG GGAATGTGAA GTTCACCTCA CACTTCCTTT CAGCTGAGGT CACCACACAG CCCCTACCAG CCCGGCTATA 001360 001361 TTGGGTGGGA TTTCAGATGC CCCCACAATG GCTGCCTTGG AGACTTTCCA CTGGTCCTCA AGAAGCAACA ACGCTCCCCT 001440 001441 TGCTCTGCCT TTGGTGGAGG GCAATTCCTC CTCTCTCTCT GCCTGGCCCC AGGCTGCTTC CACTGTCTCA GAAACTGGTC 001520 001521 CCCGGATTCC CCCAGTTACA GAGAACCCTC ATCAAGCTCT CAAGTGGCCA CTGAAACCCA GGCTCTCTAG GCTCTGGAGT 001600 001601 ATGGAAGTGA CAGCTCCATT TAATTTCTCC TTTCCTCTTG TAGGCTTACA GCATAGCACT CTCCCAAGAA ATCATCCAAA 001680 001681 AATTACCTCA ACCATTCTAT AGACCCCAAG CTGACCAGGG GAGGGAGGAC CAAGAATCTT GAAACGTAAA TACTACATTT 001760 001761 GATGGTCTCC TTCAGACTTA TTTTGGGATC TGATATCTCT TTAACAAAAA TTATAAAAAT TGAGGCAAAG AGAGCCCCAT 001840 001841 TTTTTATATA CTGTTCTAAT AAATAA |