Difference between revisions of "NONHSAT069738"
| Line 42: | Line 42: | ||
sequence = <dnaseq>acaTTATTGTTACTGTTTTTATCTGTAATTTTCTTTCTTCTTCCTTTATCCTAGCAATGATTGAGAGAATCTAAGTTGAAACAGATAATTGAGAAATATGCCTAATGAAATGGATAAAGTGATGTTCTCTATTTCTCTCTGGCCTCCAGAAATGTGTCCTGAGAATGGATCTTGTGTACCTGATGGTCCAGGTCTTTTGCAGTGTGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGCGCCAGGGCTCGTTCTCACTGCTTATGTTCTTCGGGATTCTGGGAGCCACCACTCTATCCGTCTCCATTCTGCTTTGGGCGACCCAGCGCCGAAAAGCCAAGACTTCATGAACTACATAGGTCTTACCATTGACCTAAGATCAATCTGAACTATCTTAGCCCAGTCAGGGAGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTATAATAAACACTTTTTTCTTTTT</dnaseq>| | sequence = <dnaseq>acaTTATTGTTACTGTTTTTATCTGTAATTTTCTTTCTTCTTCCTTTATCCTAGCAATGATTGAGAGAATCTAAGTTGAAACAGATAATTGAGAAATATGCCTAATGAAATGGATAAAGTGATGTTCTCTATTTCTCTCTGGCCTCCAGAAATGTGTCCTGAGAATGGATCTTGTGTACCTGATGGTCCAGGTCTTTTGCAGTGTGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGCGCCAGGGCTCGTTCTCACTGCTTATGTTCTTCGGGATTCTGGGAGCCACCACTCTATCCGTCTCCATTCTGCTTTGGGCGACCCAGCGCCGAAAAGCCAAGACTTCATGAACTACATAGGTCTTACCATTGACCTAAGATCAATCTGAACTATCTTAGCCCAGTCAGGGAGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTATAATAAACACTTTTTTCTTTTT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG027311]] | + | [[Category:Sense]][[Category:NONHSAG027311]][[Category:Transcripts]] |
Revision as of 11:43, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT069738 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
561 nt |
| Genomic location |
chr2+:27439242..27440025 |
| Exon number |
2 |
| Exons |
27439242..27439488,27439712..27440025 |
| Genome context |
|
| Sequence |
000001 acaTTATTGT TACTGTTTTT ATCTGTAATT TTCTTTCTTC TTCCTTTATC CTAGCAATGA TTGAGAGAAT CTAAGTTGAA 000080
000081 ACAGATAATT GAGAAATATG CCTAATGAAA TGGATAAAGT GATGTTCTCT ATTTCTCTCT GGCCTCCAGA AATGTGTCCT 000160 000161 GAGAATGGAT CTTGTGTACC TGATGGTCCA GGTCTTTTGC AGTGTGTTTG TGCTGATGGT TTCCATGGAT ACAAGTGTAT 000240 000241 GCGCCAGGGC TCGTTCTCAC TGCTTATGTT CTTCGGGATT CTGGGAGCCA CCACTCTATC CGTCTCCATT CTGCTTTGGG 000320 000321 CGACCCAGCG CCGAAAAGCC AAGACTTCAT GAACTACATA GGTCTTACCA TTGACCTAAG ATCAATCTGA ACTATCTTAG 000400 000401 CCCAGTCAGG GAGCTCTGCT TCCTAGAAAG GCATCTTTCG CCAGTGGATT CGCCTCAAGG TTGAGGCCGC CATTGGAAGA 000480 000481 TGAAAAATTG CACTCCCTTG GTGTAGACAA ATACCAGTTC CCATTGGTGT TGTTGCCTAT AATAAACACT TTTTTCTTTT 000560 000561 T |
Predicted Small Protein
| Name | NONHSAT069738_smProtein_164:373 |
| Length | 70 |
| Molecular weight | 7954.2636 |
| Aromaticity | 0.130434782609 |
| Instability index | 48.3173913043 |
| Isoelectric point | 7.68536376953 |
| Runs | 11 |
| Runs residual | 0.0200889654183 |
| Runs probability | 0.0208042266866 |
| Amino acid sequence | MDLVYLMVQVFCSVFVLMVSMDTSVCARARSHCLCSSGFWEPPLYPSPFCFGRPSAEKPR LHELHRSYH |
| Secondary structure | LLEEEEEEEEEEEEEEEEEELLLLHHHHHLEEEELLLLEELLLLLLLLLLLLLLLLLLLL HHHHHHLLL |
| PRMN | - |
| PiMo | - |
