Difference between revisions of "ENST00000342757.2"

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sequence = <dnaseq>CATTGCCCTCTGCCCCGCAGCCTGCCCGTTCCCAGGCCAGCGAGGGCGCTCCCAGGCCGGTCTGCAGCCAGAACACAGCCCGTTCCATGTGCTTGTCCTCGGGACACATTAGGAATGAACCCAGGCCTCAGTCCTGGCCTCCTCCTCAAGGCTGGGTGCTCAGACGTCCCCCTCAGCCCCTTTCTCTAGACCTTCCGGCTGAACAAACGAGAACATCTCACAGCCCTGCAACAGCCAGGAGCTGCTCGTGGAGCTCCACGCCCGGCTGGAGAGAGAGGAGGCACCCTGGGCAGCCCGCCAGCACCCAGGCTCTCACAGTGGAAGCCCACGTCTTCTTGGGCTCTATTTTGAAAGCTGTTCTTTCCACGACGGCTTTGACAAGAATCGATTTGAGTGAGCCGGCGTGTCAATACAGGCCAGCACAGGACTGGCCTCAGGGCCACATTGGGGAGGGTGGCGACCAGGCCCTGGCTGCAGCCCACGTGGGCAAAAGCATGGCCAGGCAGGAGGTGGGGCCTGTGAGCTTGGCTACAGCGACCGTGGGCGCTGGGCCCGGGGCTCCTCAGCCCTGAGGGGAGACCCAGGCCCAGGCAGGCTCCCAGGCGGGCTCCCGGGCTCCCAGCCTTCCGATCTTCTCCCTTTGAGACCTTGCCTTCTGCACAGTGACAGGAAAGAGCCCTGAGTCCCACTTTGCAGGGATGTATTGCATTTCCAGAAAGTTCCTTCCGGGTGCAGAGTGATACATGAACCCTGGGGACTCACTCCAACTTGGTATTGATTTTCTCCACGGAGGACCCAGCAGTCACGGCCCGTGTCTGCACAGCCCCTTGGATCCTGCGGAGGAATTCAGCCGGCCCCTCCCCCTGTGCCGAAAACCACGGAGGCAAAGCCAGGCCAGGGTACAGTGAGAACACGGGAGAGGACTGAGAGACCGCTGGCTGCCGAGGGAGGAAGAGCAGGATTCGCACCCCCGTCATCGCTGGGCCCACACGCCGCCGACAGCTTCCGCGTGTGGCCATCTGTCTTTCAGAAACCCTCTGGCAGAGGGACCCAGCAGATGACACGGGGGCCGTTCACACTCTGAAACCTGCCTGGAGTCAAAACACTGCTGGCGAGCCTCCACCGCAAACCCAATCCAGATGGTCTTCCCTGGTGGCCCTCGGGGTGGCGGGCACCCTGCCCACTCCCTGCCAGCCCCTGCCCGCTGGACTCCAGGCCCGGCCGAGCCCCCGACCGGTCTCCTGACCCAGCATGCTGCTCTCCCCTGGGCCCGGCTTTCTCGCCCGCTGGGACTCCCAGGCCCCTCCAGCCCAGCCCCGAGAGCAGGAGCCCCAAGGGAGGCTTGGCGGCTGTGGAGGCGAGTGGGCCACGTGTAGCTGGGAGGCCGGCAGGACCAGGAGCCCCTCACAGCGCAGCACCCACAGCATCACGAGCCACTTCCACTCCTGGGTGGCCTGGGGGCCCCCACCCTGCTCTGAGCTGCCCCTTGTTGTGACCTGGGGTCCCCCGTGGTGGGCCCGCCCCTTGAGCCTGGGATCCAGCCTCAGCGAGGCTCCAGAAGTGTCGTCTCCGCCGGCCAGGCGTCAGCGCCTCCACCCAGGATCACACACTCCTATCTCTGCACTTCTGCCCTCCATCCTGCTCCACGCCGCCTCTGCTTGTTATTCCAGCACATTCCAGGGTGATGCCTGCTGAAGCCACGCAGCCAGTGCCTCCACCCTACCCCCCATCTGACCCACCGGCCCCTTCCGCACGCTGGAAGCCTGCCCGGCCTGAAGTGTCCTCACCTGTCGCCCTATCCTCCCCTCCACTCCAGCCCACCGGTGACTCAGCCCTCACAGCTCTCTCCTCCCCGAGGGAGCCGGTGACTTGGCTCTGATGGTGCCGGGACCCAGCCCCGGCATGTTCAGAATCCTTGTCCTTTAACCTGCGTCCACATGTAGTCGCCTCCACCTCCCTGCCTGAACCTCCAGGCCCTGCAGAGCAAACACTGCTGCCTGCAGGAGACCCCTGGGGCCTTCTCCGTCCCCTCATCCTCCTAAGGAGCCTCCCCTGCCACCGTGCCAGAATGTGCCGGAGGAACAGAGGCCCGAGCCTCCCGTGGCCCCAGCGAGGCTTCCTCTGGGGAAGACAGTGAGCCCAACGCCCTGGCTCTCGAGGGGTGGACGGAGTCCAGCTGGCATCGACCGGGTGCCCCTCTTCACCGGTGTCCACAGTCCTTGAGAGCAAAGGGTTCCCAGAGGCGACCTCCCTCCTGCACAGGCATTTGTCATCCTTACCCTCTAGGACAGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTGCCACTTTGCCGGATTTGGACTGTATACAGACCGAAGCATGTGGCATGAAGCCTTCTGCTGTCAGCAAGTTCCTTGTCCCTCGACAGTATGTGCCCAGGCTGCCCTTCAAGGTGGCAGTGATGGCAGTTGTCTCTTGCACGCTGCGTACAGTTCTGTCACTGACTCTTACACACAGCCCTGGAGACGGGAGAGTGCCGGGAGCATTCTATGCAAGTGTCCTGGCCTTTGCGGGCGTCTCCACAGCACAAACACGAGTCAGGGACCACCCCTCTTCTGCTTCCATGATTCCACCAACTGGGTGGGGCAGAGCAGTGCCAGGGCCGGAGGCACGCCCCAGGTGAGGGCAGGTGGCCATGCCAGTGAGTGCACTGCGTTCTCAGTTAATTCATCCGAAATATTTCTAAGTTTCTTGATTATTGCAGTTGCATCCCCAAGATAATGCCGCCCTCACCAAGTAGAAGGCACATGTGCTCTGATGGCCCCTCCCACACTGGGGTCAGGGCACAGCAACTTAGCGAGGCGACGTGGGGGCTCAGAGGACCTCGGACCAGGCTCGGCACATGGGGCTTCTCCAGCCAGCCAGGGGGAAGCACCCTGCAGACTGCTAACTTTTGCAAAATAGAGTAAAAAAGATCAGCTAGAAAAATAAAACAAAAAAGGAAAGATATACAAAA</dnaseq>|
 
sequence = <dnaseq>CATTGCCCTCTGCCCCGCAGCCTGCCCGTTCCCAGGCCAGCGAGGGCGCTCCCAGGCCGGTCTGCAGCCAGAACACAGCCCGTTCCATGTGCTTGTCCTCGGGACACATTAGGAATGAACCCAGGCCTCAGTCCTGGCCTCCTCCTCAAGGCTGGGTGCTCAGACGTCCCCCTCAGCCCCTTTCTCTAGACCTTCCGGCTGAACAAACGAGAACATCTCACAGCCCTGCAACAGCCAGGAGCTGCTCGTGGAGCTCCACGCCCGGCTGGAGAGAGAGGAGGCACCCTGGGCAGCCCGCCAGCACCCAGGCTCTCACAGTGGAAGCCCACGTCTTCTTGGGCTCTATTTTGAAAGCTGTTCTTTCCACGACGGCTTTGACAAGAATCGATTTGAGTGAGCCGGCGTGTCAATACAGGCCAGCACAGGACTGGCCTCAGGGCCACATTGGGGAGGGTGGCGACCAGGCCCTGGCTGCAGCCCACGTGGGCAAAAGCATGGCCAGGCAGGAGGTGGGGCCTGTGAGCTTGGCTACAGCGACCGTGGGCGCTGGGCCCGGGGCTCCTCAGCCCTGAGGGGAGACCCAGGCCCAGGCAGGCTCCCAGGCGGGCTCCCGGGCTCCCAGCCTTCCGATCTTCTCCCTTTGAGACCTTGCCTTCTGCACAGTGACAGGAAAGAGCCCTGAGTCCCACTTTGCAGGGATGTATTGCATTTCCAGAAAGTTCCTTCCGGGTGCAGAGTGATACATGAACCCTGGGGACTCACTCCAACTTGGTATTGATTTTCTCCACGGAGGACCCAGCAGTCACGGCCCGTGTCTGCACAGCCCCTTGGATCCTGCGGAGGAATTCAGCCGGCCCCTCCCCCTGTGCCGAAAACCACGGAGGCAAAGCCAGGCCAGGGTACAGTGAGAACACGGGAGAGGACTGAGAGACCGCTGGCTGCCGAGGGAGGAAGAGCAGGATTCGCACCCCCGTCATCGCTGGGCCCACACGCCGCCGACAGCTTCCGCGTGTGGCCATCTGTCTTTCAGAAACCCTCTGGCAGAGGGACCCAGCAGATGACACGGGGGCCGTTCACACTCTGAAACCTGCCTGGAGTCAAAACACTGCTGGCGAGCCTCCACCGCAAACCCAATCCAGATGGTCTTCCCTGGTGGCCCTCGGGGTGGCGGGCACCCTGCCCACTCCCTGCCAGCCCCTGCCCGCTGGACTCCAGGCCCGGCCGAGCCCCCGACCGGTCTCCTGACCCAGCATGCTGCTCTCCCCTGGGCCCGGCTTTCTCGCCCGCTGGGACTCCCAGGCCCCTCCAGCCCAGCCCCGAGAGCAGGAGCCCCAAGGGAGGCTTGGCGGCTGTGGAGGCGAGTGGGCCACGTGTAGCTGGGAGGCCGGCAGGACCAGGAGCCCCTCACAGCGCAGCACCCACAGCATCACGAGCCACTTCCACTCCTGGGTGGCCTGGGGGCCCCCACCCTGCTCTGAGCTGCCCCTTGTTGTGACCTGGGGTCCCCCGTGGTGGGCCCGCCCCTTGAGCCTGGGATCCAGCCTCAGCGAGGCTCCAGAAGTGTCGTCTCCGCCGGCCAGGCGTCAGCGCCTCCACCCAGGATCACACACTCCTATCTCTGCACTTCTGCCCTCCATCCTGCTCCACGCCGCCTCTGCTTGTTATTCCAGCACATTCCAGGGTGATGCCTGCTGAAGCCACGCAGCCAGTGCCTCCACCCTACCCCCCATCTGACCCACCGGCCCCTTCCGCACGCTGGAAGCCTGCCCGGCCTGAAGTGTCCTCACCTGTCGCCCTATCCTCCCCTCCACTCCAGCCCACCGGTGACTCAGCCCTCACAGCTCTCTCCTCCCCGAGGGAGCCGGTGACTTGGCTCTGATGGTGCCGGGACCCAGCCCCGGCATGTTCAGAATCCTTGTCCTTTAACCTGCGTCCACATGTAGTCGCCTCCACCTCCCTGCCTGAACCTCCAGGCCCTGCAGAGCAAACACTGCTGCCTGCAGGAGACCCCTGGGGCCTTCTCCGTCCCCTCATCCTCCTAAGGAGCCTCCCCTGCCACCGTGCCAGAATGTGCCGGAGGAACAGAGGCCCGAGCCTCCCGTGGCCCCAGCGAGGCTTCCTCTGGGGAAGACAGTGAGCCCAACGCCCTGGCTCTCGAGGGGTGGACGGAGTCCAGCTGGCATCGACCGGGTGCCCCTCTTCACCGGTGTCCACAGTCCTTGAGAGCAAAGGGTTCCCAGAGGCGACCTCCCTCCTGCACAGGCATTTGTCATCCTTACCCTCTAGGACAGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTGCCACTTTGCCGGATTTGGACTGTATACAGACCGAAGCATGTGGCATGAAGCCTTCTGCTGTCAGCAAGTTCCTTGTCCCTCGACAGTATGTGCCCAGGCTGCCCTTCAAGGTGGCAGTGATGGCAGTTGTCTCTTGCACGCTGCGTACAGTTCTGTCACTGACTCTTACACACAGCCCTGGAGACGGGAGAGTGCCGGGAGCATTCTATGCAAGTGTCCTGGCCTTTGCGGGCGTCTCCACAGCACAAACACGAGTCAGGGACCACCCCTCTTCTGCTTCCATGATTCCACCAACTGGGTGGGGCAGAGCAGTGCCAGGGCCGGAGGCACGCCCCAGGTGAGGGCAGGTGGCCATGCCAGTGAGTGCACTGCGTTCTCAGTTAATTCATCCGAAATATTTCTAAGTTTCTTGATTATTGCAGTTGCATCCCCAAGATAATGCCGCCCTCACCAAGTAGAAGGCACATGTGCTCTGATGGCCCCTCCCACACTGGGGTCAGGGCACAGCAACTTAGCGAGGCGACGTGGGGGCTCAGAGGACCTCGGACCAGGCTCGGCACATGGGGCTTCTCCAGCCAGCCAGGGGGAAGCACCCTGCAGACTGCTAACTTTTGCAAAATAGAGTAAAAAAGATCAGCTAGAAAAATAAAACAAAAAAGGAAAGATATACAAAA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000188660.3]]
+
[[Category:Intergenic]][[Category:ENSG00000188660.3]][[Category:lnc-RRP1B-3]][[Category:Transcripts]]

Latest revision as of 14:41, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000342757.2

Source

Gencode19

Same with

lnc-RRP1B-3:2

Classification

intergenic

Length

3004 nt

Genomic location

chr21+:44869904..44873773

Exon number

3

Exons

44869904..44870801,44871053..44872385,44873001..44873773

Genome context

Sequence
000001 CATTGCCCTC TGCCCCGCAG CCTGCCCGTT CCCAGGCCAG CGAGGGCGCT CCCAGGCCGG TCTGCAGCCA GAACACAGCC 000080
000081 CGTTCCATGT GCTTGTCCTC GGGACACATT AGGAATGAAC CCAGGCCTCA GTCCTGGCCT CCTCCTCAAG GCTGGGTGCT 000160
000161 CAGACGTCCC CCTCAGCCCC TTTCTCTAGA CCTTCCGGCT GAACAAACGA GAACATCTCA CAGCCCTGCA ACAGCCAGGA 000240
000241 GCTGCTCGTG GAGCTCCACG CCCGGCTGGA GAGAGAGGAG GCACCCTGGG CAGCCCGCCA GCACCCAGGC TCTCACAGTG 000320
000321 GAAGCCCACG TCTTCTTGGG CTCTATTTTG AAAGCTGTTC TTTCCACGAC GGCTTTGACA AGAATCGATT TGAGTGAGCC 000400
000401 GGCGTGTCAA TACAGGCCAG CACAGGACTG GCCTCAGGGC CACATTGGGG AGGGTGGCGA CCAGGCCCTG GCTGCAGCCC 000480
000481 ACGTGGGCAA AAGCATGGCC AGGCAGGAGG TGGGGCCTGT GAGCTTGGCT ACAGCGACCG TGGGCGCTGG GCCCGGGGCT 000560
000561 CCTCAGCCCT GAGGGGAGAC CCAGGCCCAG GCAGGCTCCC AGGCGGGCTC CCGGGCTCCC AGCCTTCCGA TCTTCTCCCT 000640
000641 TTGAGACCTT GCCTTCTGCA CAGTGACAGG AAAGAGCCCT GAGTCCCACT TTGCAGGGAT GTATTGCATT TCCAGAAAGT 000720
000721 TCCTTCCGGG TGCAGAGTGA TACATGAACC CTGGGGACTC ACTCCAACTT GGTATTGATT TTCTCCACGG AGGACCCAGC 000800
000801 AGTCACGGCC CGTGTCTGCA CAGCCCCTTG GATCCTGCGG AGGAATTCAG CCGGCCCCTC CCCCTGTGCC GAAAACCACG 000880
000881 GAGGCAAAGC CAGGCCAGGG TACAGTGAGA ACACGGGAGA GGACTGAGAG ACCGCTGGCT GCCGAGGGAG GAAGAGCAGG 000960
000961 ATTCGCACCC CCGTCATCGC TGGGCCCACA CGCCGCCGAC AGCTTCCGCG TGTGGCCATC TGTCTTTCAG AAACCCTCTG 001040
001041 GCAGAGGGAC CCAGCAGATG ACACGGGGGC CGTTCACACT CTGAAACCTG CCTGGAGTCA AAACACTGCT GGCGAGCCTC 001120
001121 CACCGCAAAC CCAATCCAGA TGGTCTTCCC TGGTGGCCCT CGGGGTGGCG GGCACCCTGC CCACTCCCTG CCAGCCCCTG 001200
001201 CCCGCTGGAC TCCAGGCCCG GCCGAGCCCC CGACCGGTCT CCTGACCCAG CATGCTGCTC TCCCCTGGGC CCGGCTTTCT 001280
001281 CGCCCGCTGG GACTCCCAGG CCCCTCCAGC CCAGCCCCGA GAGCAGGAGC CCCAAGGGAG GCTTGGCGGC TGTGGAGGCG 001360
001361 AGTGGGCCAC GTGTAGCTGG GAGGCCGGCA GGACCAGGAG CCCCTCACAG CGCAGCACCC ACAGCATCAC GAGCCACTTC 001440
001441 CACTCCTGGG TGGCCTGGGG GCCCCCACCC TGCTCTGAGC TGCCCCTTGT TGTGACCTGG GGTCCCCCGT GGTGGGCCCG 001520
001521 CCCCTTGAGC CTGGGATCCA GCCTCAGCGA GGCTCCAGAA GTGTCGTCTC CGCCGGCCAG GCGTCAGCGC CTCCACCCAG 001600
001601 GATCACACAC TCCTATCTCT GCACTTCTGC CCTCCATCCT GCTCCACGCC GCCTCTGCTT GTTATTCCAG CACATTCCAG 001680
001681 GGTGATGCCT GCTGAAGCCA CGCAGCCAGT GCCTCCACCC TACCCCCCAT CTGACCCACC GGCCCCTTCC GCACGCTGGA 001760
001761 AGCCTGCCCG GCCTGAAGTG TCCTCACCTG TCGCCCTATC CTCCCCTCCA CTCCAGCCCA CCGGTGACTC AGCCCTCACA 001840
001841 GCTCTCTCCT CCCCGAGGGA GCCGGTGACT TGGCTCTGAT GGTGCCGGGA CCCAGCCCCG GCATGTTCAG AATCCTTGTC 001920
001921 CTTTAACCTG CGTCCACATG TAGTCGCC