Difference between revisions of "ENST00000414790.1"

From LncRNAWiki
Jump to: navigation, search
 
(One intermediate revision by one other user not shown)
Line 42: Line 42:
 
sequence = <dnaseq>AGTTAGAAAAAGCCCGGGCTAGGACCGAGGAGCAGGGTGAGGGAGGGGGTGGGATGGGTGGGGGGTAACGGGGGAAACTGGGGAAGTGGGGAACCGAGGGGCAACCAGGGGAAGATGGGGTGCTGGAGGAGAGCTTGTGGGAGCCAAGGAGCACCTTGGACATCTGGAGTCTGGCAGGAGTGATGACGGGTGGAGGGGCTAGCTCGAGGCAGGGCTGGTGGGGCCTGAGGCCAGTGAGGAGTGTGGAGTAGGCGCCCAGGCATCGTGCAGACAGGGCGACATCAGCTGGGGACGATGGGCCTGAGCTAGGGCTGGAAAGAAGGGGGAGCCAGGCATTCATCCCGGTCACTTTTGGTTACAGGACGTGGCAGCTGGTTGGACGAGGGGAGCTGGTGGGCAGGGTTTGATCCCAGGGCCTGGGCAACGGAGGTGTAGCTGGCAGCAGCGGGCAGGTGAGGACCCCATCTGCCGGGCAGGTGAGTCCCTTCCCTCCCCAGGCCTCGCTTCCCCAGCCTTCTGAAAGAAGGAGGTTTAGGGGATCGAGGGCTGGCGGGGAGAAGCAGACACCCTCCCAGCAGAGGGGCAGGATGGGGGCAGGAGAGTTAGCAAAGGTGACATCTTCTCGGGGGGAGCCGAGACTGCGCAAGGCTGGGGGGTTATGGGCCCGTTCCAGGCAGAAAGAGCAAGAGGGCAGGGAGGGAGCACAGGGGTGGCCAGCGTAGGGTCCAGCACGTGGGGTGGTACCCCAGGCCTGGGTCAGACAGGGACATGGCAGGGGACACAGGACAGAGGGGTCCCCAGCTGCCACCTCACCCACCGCAATTCATTTAGTAGCAGGCACAGGGGCAGCTCCGGCACGGCTTTCTCAGGCCTATGCCGGAGCCTCGAGGGCTGGAGAGCGGGAAGACAGGCAGTGCTCGGGGAGTTGCAGCAGGACGTCACCAGGAGGGCGAAGCGGCCACGGGAGGGGGGCCCCGGGACATTGCGCAGCAAGGAGGCTGCAGGGGCTCGGCCTGCGGGCGCCGGTCCCACGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGCCCCTGGGGCTGGCTTGGCAGACAGTACAGCATCCAGGGGAGTCAAGGGCATGGGGCGAGACCAGACTAGGCGAGGCGGGCGGGGCGGAGTGAATGAGCTCTCAGGAGGGAGGATGGTGCAGGCAGGGGTGAGGAGCGCAGCGGGCGGCGAGCGGGAGGCACTGGCCTCCAGAGCCCGTGGCCAAGGCGGGCCTCGCGGGCGGCGACGGAGCCGGGATCGGTGCCTCAGCGTTCGGGCTGGAGACGAGGCCAGGTCTCCAGCTGGGGTGGACGTGCCCACCAGCTGCCGAAGGCCAAGACGCCAGGTCCGGTGGACGTGACAAGCAGGACATGACATGGTCCGGTGTGACGGCGAGGACAGAGGAGGCGCGTCCGGCCTTCCTGAACACCTTAGGCTGGTGGGGCTGCGGCAAGAAGCGGGTCTGTTTCTTTACTTCCTCCACGGAGTCGGCACACTATGGCTGCCCTCTGGGCTCCCAGAACCCACAACATGAAAGAAATGGTGCTACCCAGCTCAAGCCTGGGCCTTTGAATCCGGACACAAAACCCTCTAGCTTGGAAATGAATATGCTGCACTTTACAACCACTGCACTACCTGACTCAGGAATCGGCTCTGGAAGGTGAAGCTAGAGGAACCAGACCTCATCAGCCCAACATCAAAGACACCATCGGAACAGCAGCGCCCGCAGCACCCACCCCGCACCGGCGACTCCATCTTCATGGCCACCCCCTGCGGCGGACGGTTGACCACCAGCCACCACATCATCCCAGAGCTGAGCTCCTCCAGCGGGATGACGCCGTCCCCACCACCTCCCTCTTCTTCTTTTTCATCCTTCTGTCTCTTTGTTTCTGAGCTTTCCTGTCTTTCCTTTTTTCTGAGAGATTCAAAGCCTCCACGACTCTGTTTCCCCCGTCCCTTCTGAATTTAATTTGCACTAAGTCATTTGCACTGGTTGGAGTTGTGGAGACGGCCTTGAGTCTCAGTACGAGTGTGCGTGAGTGTGAGCCACCTTGGCAAGTGCCTGTGCAGGGCCCGGCCGCCCTCCATCTGGGCCGGGTGACTGGGCGCCGGCTGTGTGCCCGAGGCCTCACCCTGCCCTCGCCTAGTCTGGAAGCTCCGACCGACATCACGGAGCAGCCTTCAAGCATTCCATTACGCCCCATCTCGCTCTGTGCCCCTCCCCACCAGGGCTTCAGCAGGAGCCCTGGACTCATCATCAATAAACACTGTTACAGCAA</dnaseq>|
 
sequence = <dnaseq>AGTTAGAAAAAGCCCGGGCTAGGACCGAGGAGCAGGGTGAGGGAGGGGGTGGGATGGGTGGGGGGTAACGGGGGAAACTGGGGAAGTGGGGAACCGAGGGGCAACCAGGGGAAGATGGGGTGCTGGAGGAGAGCTTGTGGGAGCCAAGGAGCACCTTGGACATCTGGAGTCTGGCAGGAGTGATGACGGGTGGAGGGGCTAGCTCGAGGCAGGGCTGGTGGGGCCTGAGGCCAGTGAGGAGTGTGGAGTAGGCGCCCAGGCATCGTGCAGACAGGGCGACATCAGCTGGGGACGATGGGCCTGAGCTAGGGCTGGAAAGAAGGGGGAGCCAGGCATTCATCCCGGTCACTTTTGGTTACAGGACGTGGCAGCTGGTTGGACGAGGGGAGCTGGTGGGCAGGGTTTGATCCCAGGGCCTGGGCAACGGAGGTGTAGCTGGCAGCAGCGGGCAGGTGAGGACCCCATCTGCCGGGCAGGTGAGTCCCTTCCCTCCCCAGGCCTCGCTTCCCCAGCCTTCTGAAAGAAGGAGGTTTAGGGGATCGAGGGCTGGCGGGGAGAAGCAGACACCCTCCCAGCAGAGGGGCAGGATGGGGGCAGGAGAGTTAGCAAAGGTGACATCTTCTCGGGGGGAGCCGAGACTGCGCAAGGCTGGGGGGTTATGGGCCCGTTCCAGGCAGAAAGAGCAAGAGGGCAGGGAGGGAGCACAGGGGTGGCCAGCGTAGGGTCCAGCACGTGGGGTGGTACCCCAGGCCTGGGTCAGACAGGGACATGGCAGGGGACACAGGACAGAGGGGTCCCCAGCTGCCACCTCACCCACCGCAATTCATTTAGTAGCAGGCACAGGGGCAGCTCCGGCACGGCTTTCTCAGGCCTATGCCGGAGCCTCGAGGGCTGGAGAGCGGGAAGACAGGCAGTGCTCGGGGAGTTGCAGCAGGACGTCACCAGGAGGGCGAAGCGGCCACGGGAGGGGGGCCCCGGGACATTGCGCAGCAAGGAGGCTGCAGGGGCTCGGCCTGCGGGCGCCGGTCCCACGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGCCCCTGGGGCTGGCTTGGCAGACAGTACAGCATCCAGGGGAGTCAAGGGCATGGGGCGAGACCAGACTAGGCGAGGCGGGCGGGGCGGAGTGAATGAGCTCTCAGGAGGGAGGATGGTGCAGGCAGGGGTGAGGAGCGCAGCGGGCGGCGAGCGGGAGGCACTGGCCTCCAGAGCCCGTGGCCAAGGCGGGCCTCGCGGGCGGCGACGGAGCCGGGATCGGTGCCTCAGCGTTCGGGCTGGAGACGAGGCCAGGTCTCCAGCTGGGGTGGACGTGCCCACCAGCTGCCGAAGGCCAAGACGCCAGGTCCGGTGGACGTGACAAGCAGGACATGACATGGTCCGGTGTGACGGCGAGGACAGAGGAGGCGCGTCCGGCCTTCCTGAACACCTTAGGCTGGTGGGGCTGCGGCAAGAAGCGGGTCTGTTTCTTTACTTCCTCCACGGAGTCGGCACACTATGGCTGCCCTCTGGGCTCCCAGAACCCACAACATGAAAGAAATGGTGCTACCCAGCTCAAGCCTGGGCCTTTGAATCCGGACACAAAACCCTCTAGCTTGGAAATGAATATGCTGCACTTTACAACCACTGCACTACCTGACTCAGGAATCGGCTCTGGAAGGTGAAGCTAGAGGAACCAGACCTCATCAGCCCAACATCAAAGACACCATCGGAACAGCAGCGCCCGCAGCACCCACCCCGCACCGGCGACTCCATCTTCATGGCCACCCCCTGCGGCGGACGGTTGACCACCAGCCACCACATCATCCCAGAGCTGAGCTCCTCCAGCGGGATGACGCCGTCCCCACCACCTCCCTCTTCTTCTTTTTCATCCTTCTGTCTCTTTGTTTCTGAGCTTTCCTGTCTTTCCTTTTTTCTGAGAGATTCAAAGCCTCCACGACTCTGTTTCCCCCGTCCCTTCTGAATTTAATTTGCACTAAGTCATTTGCACTGGTTGGAGTTGTGGAGACGGCCTTGAGTCTCAGTACGAGTGTGCGTGAGTGTGAGCCACCTTGGCAAGTGCCTGTGCAGGGCCCGGCCGCCCTCCATCTGGGCCGGGTGACTGGGCGCCGGCTGTGTGCCCGAGGCCTCACCCTGCCCTCGCCTAGTCTGGAAGCTCCGACCGACATCACGGAGCAGCCTTCAAGCATTCCATTACGCCCCATCTCGCTCTGTGCCCCTCCCCACCAGGGCTTCAGCAGGAGCCCTGGACTCATCATCAATAAACACTGTTACAGCAA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000130600.11]]
+
[[Category:Intergenic]][[Category:ENSG00000130600.11]][[Category:lnc-C11orf89-2]][[Category:Transcripts]]

Latest revision as of 14:52, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000414790.1

Source

Gencode19

Same with

lnc-C11orf89-2:2

Classification

intergenic

Length

2348 nt

Genomic location

chr11-:2016406..2019105

Exon number

5

Exons

2016406..2017024,2017106..2017228,2017309..2017421,2017517..2017651,2017748..2019105

Genome context

Sequence
000001 AGTTAGAAAA AGCCCGGGCT AGGACCGAGG AGCAGGGTGA GGGAGGGGGT GGGATGGGTG GGGGGTAACG GGGGAAACTG 000080
000081 GGGAAGTGGG GAACCGAGGG GCAACCAGGG GAAGATGGGG TGCTGGAGGA GAGCTTGTGG GAGCCAAGGA GCACCTTGGA 000160
000161 CATCTGGAGT CTGGCAGGAG TGATGACGGG TGGAGGGGCT AGCTCGAGGC AGGGCTGGTG GGGCCTGAGG CCAGTGAGGA 000240
000241 GTGTGGAGTA GGCGCCCAGG CATCGTGCAG ACAGGGCGAC ATCAGCTGGG GACGATGGGC CTGAGCTAGG GCTGGAAAGA 000320
000321 AGGGGGAGCC AGGCATTCAT CCCGGTCACT TTTGGTTACA GGACGTGGCA GCTGGTTGGA CGAGGGGAGC TGGTGGGCAG 000400
000401 GGTTTGATCC CAGGGCCTGG GCAACGGAGG TGTAGCTGGC AGCAGCGGGC AGGTGAGGAC CCCATCTGCC GGGCAGGTGA 000480
000481 GTCCCTTCCC TCCCCAGGCC TCGCTTCCCC AGCCTTCTGA AAGAAGGAGG TTTAGGGGAT CGAGGGCTGG CGGGGAGAAG 000560
000561 CAGACACCCT CCCAGCAGAG GGGCAGGATG GGGGCAGGAG AGTTAGCAAA GGTGACATCT TCTCGGGGGG AGCCGAGACT 000640
000641 GCGCAAGGCT GGGGGGTTAT GGGCCCGTTC CAGGCAGAAA GAGCAAGAGG GCAGGGAGGG AGCACAGGGG TGGCCAGCGT 000720
000721 AGGGTCCAGC ACGTGGGGTG GTACCCCAGG CCTGGGTCAG ACAGGGACAT GGCAGGGGAC ACAGGACAGA GGGGTCCCCA 000800
000801 GCTGCCACCT CACCCACCGC AATTCATTTA GTAGCAGGCA CAGGGGCAGC TCCGGCACGG CTTTCTCAGG CCTATGCCGG 000880
000881 AGCCTCGAGG GCTGGAGAGC GGGAAGACAG GCAGTGCTCG GGGAGTTGCA GCAGGACGTC ACCAGGAGGG CGAAGCGGCC 000960
000961 ACGGGAGGGG GGCCCCGGGA CATTGCGCAG CAAGGAGGCT GCAGGGGCTC GGCCTGCGGG CGCCGGTCCC ACGAGGCACT 001040
001041 GCGGCCCAGG GTCTGGTGCG GAGAGGGCCC ACAGTGGACT TGGTGACGCT GTATGCCCTC ACCGCTCAGC CCCTGGGGCT 001120
001121 GGCTTGGCAG ACAGTACAGC ATCCAGGGGA GTCAAGGGCA TGGGGCGAGA CCAGACTAGG CGAGGCGGGC GGGGCGGAGT 001200
001201 GAATGAGCTC TCAGGAGGGA GGATGGTGCA GGCAGGGGTG AGGAGCGCAG CGGGCGGCGA GCGGGAGGCA CTGGCCTCCA 001280
001281 GAGCCCGTGG CCAAGGCGGG CCTCGCGGGC GGCGACGGAG CCGGGATCGG TGCCTCAGCG TTCGGGCTGG AGACGAGGCC 001360
001361 AGGTCTCCAG CTGGGGTGGA CGTGCCCACC AGCTGCCGAA GGCCAAGACG CCAGGTCCGG TGGACGTGAC AAGCAGGACA 001440
001441 TGACATGGTC CGGTGTGACG GCGAGGACAG AGGAGGCGCG TCCGGCCTTC CTGAACACCT TAGGCTGGTG GGGCTGCGGC 001520
001521 AAGAAGCGGG TCTGTTTCTT TACTTCCTCC ACGGAGTCGG CACACTATGG CTGCCCTCTG GGCTCCCAGA ACCCACAACA 001600
001601 TGAAAGAAAT GGTGCTACCC AGCTCAAGCC TGGGCCTTTG AATCCGGACA CAAAACCCTC TAGCTTGGAA ATGAATATGC 001680
001681 TGCACTTTAC AACCACTGCA CTACCTGACT CAGGAATCGG CTCTGGAAGG TGAAGCTAGA GGAACCAGAC CTCATCAGCC 001760
001761 CAACATCAAA GACACCATCG GAACAGCAGC GCCCGCAGCA CCCACCCCGC ACCGGCGACT CCATCTTCAT GGCCACCCCC 001840
001841 TGCGGCGGAC GGTTGACCAC CAGCCACCAC ATCATCCCAG AGCTGAGCTC CTCCAGCGGG ATGACGCCGT CCCCACCACC 001920
001921 TCCCTCTTCT TCTTTTTCAT CCTTCTGTCT CTTTGTTTCT GAGCTTTCCT GTCTTTCCTT TTTTCTGAGA GATTCAAAGC 002000
002001 CTCCACGACT CTGTTTCCCC CGTCCCTTCT GAATTTAATT TGCACTAAGT CATTTGCACT GGTTGGAGTT GTGGAGACGG 002080
002081 CCTTGAGTCT CAGTACGAGT GTGCGTGAGT GTGAGCCACC TTGGCAAGTG CCTGTGCAGG GCCCGGCCGC CCTCCATCTG 002160
002161 GGCCGGGTGA CTGGGCGCCG GCTGTGTGCC CGAGGCCTCA CCCTGCCCTC GCCTAGTCTG GAAGCTCCGA CCGACATCAC 002240
002241 GGAGCAGCCT TCAAGCATTC CATTACGCCC CATCTCGCTC TGTGCCCCTC CCCACCAGGG CTTCAGCAGG AGCCCTGGAC 002320
002321 TCATCATCAA TAAACACTGT TACAGCAA
[back to top]