Difference between revisions of "ENST00000423530.1"

From LncRNAWiki
Jump to: navigation, search
 
(One intermediate revision by one other user not shown)
Line 42: Line 42:
 
sequence = <dnaseq>GATTCATCTTCCCTTCTATATCTGAAAGGATAAGCAGGCTGTGCTTTCCAGAGCTGGAGGGCAGTGGCGCGATCTCCGCTCACCGCAAGCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGTGCTACCACGCCCAGCTAAATTTTTGTATTTTTGGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTGCAGGCCCAGAATACTCAGTACCTCTCAATGACCCTCAGACGCTGTAGGAAGAGGATTGGTTCACCTTTTAACCCAGAATTTCTCACATTGAATGGACAGGATGCATTCCAAGAGGCCAGAGTATGTGCATCTCAGCTCCTGATGGTTTCCACCACCACCATTACTTTCTCTATGTCAAGATACCTGGGAAGCCGGTGTTTCATTTGCATTCTTGGAGCCCAGGAACTGTCTTCTACAAACTTTTCTTCCTAGTACCATGTAAACGTACACAGGAAACGTTCAGAAAACATCAGCCAAATAGAAGAATAAGGAAATTCCTTCACTGACTAGATATTGGTGTTTGATTCTGTCCTGCTTTGTACTCAATGGCTATTTCGGGGTTTCCATTGCGGAAAACTATTTGGAAAATTGCAAGCCACGAGACAAGCCTCTAAGCTACTCCAGGATCATTGAGGACTCTCCATGGGTTCTTATTGTTAAAGATCTTAACTCCTCAAGCCACTGCATTTTTACTATATGCCTTGAACTACAAGATGTGTTAAGATTTATAGGATAAGGTTCTCATCTCTAAAAACTCATGGTCTCGATGGAGAAGCAGTATTTACACACATGGAGAAGTTGAGAGTACTTGAATGTGGAGTATAAAGTGTGCGATATTGACAAGAAGCTCTACGAAAGTTCAGGAAGAGGAGGAGCAAGTGAGGATGGAGATGGACTTTGCAGAATGGAGGAGAGGCAAAGAAACGGTTAGAAACAATCTACATAATGAAAAGTCACTTTTGGGAGTTGTTTTAAGGCAGAGTATCATATCGCATCAAAACCGCTCCATAAGTCCTGCCACTCCACGTGCAATGCCATGAACTTGAAGAAACTGCTGGTAAGAGAAAGCAAATGCTGTGACCAGGCAACTGCTGCAAACCAATGGGCTTTGGGGAACTGTGCTTCCCTTCAGAAAGGAAAGAGTATTTAACGATGAAAAGGAAGGTGGATTTTCCCTACTCATGCTTCCTAGAGATTTGGTGAGGATTTGTTGAGTCATGGGACATTTCAGCTTGCCAAGCTTCTTTAGCTTTAGCACGTGTTTCCACCAGTGTCCCTTAACGGAGAGGATGACTATGTCACTGAAGAAGTGGAGGGGCTGAAAATGGACTCAGCTCTTGGCCCCTGTAGAGACTGCAAGACTCCGTGCACAACGTGACAGTCGGGGCTTCCTCTGAGCACTGCGCCGTTCAGCCCTATTGCGCAACCTGCCACGCCCTGTTACTGTAAATGGAACACCGGCTGTGAGCTGGTCAAGGCCCTGCCATGACAAGGCCACTTGCATAGGACTCCAAATTAAAAAAAAAAAAAAGGCCTTTCTTATTGACTGAAAAACTGGTTGTGTTTTTCATATTTTTCACTTTCTGGAGCTGAATTATTAATAGGCAAAAATTAGGTGGGGCTTCATTGATATTCTCACCAGCTTTTACAAACCAAGAATCGGAAAGTGTGCCTCGGTGAGTTGCCTTTTGTTAGCAGTGTGGAGATGCAGGCAAAAGTGATCAGCGTGGTTTGTATTTGCAGCCGCCCCTCCCCTCTCTTCAGAGTCTCTCCTTCCCGGCTGCAAGGTGCGTCTTTAATGTGCGACACTGACAAGGCGTTTCAGCCATGCAGCTAATTAATATCATGCCGAGGCTCAATGTGACAGGTCCTTCAGACTCATAAATCAGAAACCACTAACAAATGTCGTTCCTTTTCTGATCTCTTTCTCTTGCTTTTTAATATGTTGATTTACTTTCAGTATGCATAACCAAAAAAGAAACAAACCAATAAAAATACTGATG</dnaseq>|
 
sequence = <dnaseq>GATTCATCTTCCCTTCTATATCTGAAAGGATAAGCAGGCTGTGCTTTCCAGAGCTGGAGGGCAGTGGCGCGATCTCCGCTCACCGCAAGCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGTGCTACCACGCCCAGCTAAATTTTTGTATTTTTGGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTGCAGGCCCAGAATACTCAGTACCTCTCAATGACCCTCAGACGCTGTAGGAAGAGGATTGGTTCACCTTTTAACCCAGAATTTCTCACATTGAATGGACAGGATGCATTCCAAGAGGCCAGAGTATGTGCATCTCAGCTCCTGATGGTTTCCACCACCACCATTACTTTCTCTATGTCAAGATACCTGGGAAGCCGGTGTTTCATTTGCATTCTTGGAGCCCAGGAACTGTCTTCTACAAACTTTTCTTCCTAGTACCATGTAAACGTACACAGGAAACGTTCAGAAAACATCAGCCAAATAGAAGAATAAGGAAATTCCTTCACTGACTAGATATTGGTGTTTGATTCTGTCCTGCTTTGTACTCAATGGCTATTTCGGGGTTTCCATTGCGGAAAACTATTTGGAAAATTGCAAGCCACGAGACAAGCCTCTAAGCTACTCCAGGATCATTGAGGACTCTCCATGGGTTCTTATTGTTAAAGATCTTAACTCCTCAAGCCACTGCATTTTTACTATATGCCTTGAACTACAAGATGTGTTAAGATTTATAGGATAAGGTTCTCATCTCTAAAAACTCATGGTCTCGATGGAGAAGCAGTATTTACACACATGGAGAAGTTGAGAGTACTTGAATGTGGAGTATAAAGTGTGCGATATTGACAAGAAGCTCTACGAAAGTTCAGGAAGAGGAGGAGCAAGTGAGGATGGAGATGGACTTTGCAGAATGGAGGAGAGGCAAAGAAACGGTTAGAAACAATCTACATAATGAAAAGTCACTTTTGGGAGTTGTTTTAAGGCAGAGTATCATATCGCATCAAAACCGCTCCATAAGTCCTGCCACTCCACGTGCAATGCCATGAACTTGAAGAAACTGCTGGTAAGAGAAAGCAAATGCTGTGACCAGGCAACTGCTGCAAACCAATGGGCTTTGGGGAACTGTGCTTCCCTTCAGAAAGGAAAGAGTATTTAACGATGAAAAGGAAGGTGGATTTTCCCTACTCATGCTTCCTAGAGATTTGGTGAGGATTTGTTGAGTCATGGGACATTTCAGCTTGCCAAGCTTCTTTAGCTTTAGCACGTGTTTCCACCAGTGTCCCTTAACGGAGAGGATGACTATGTCACTGAAGAAGTGGAGGGGCTGAAAATGGACTCAGCTCTTGGCCCCTGTAGAGACTGCAAGACTCCGTGCACAACGTGACAGTCGGGGCTTCCTCTGAGCACTGCGCCGTTCAGCCCTATTGCGCAACCTGCCACGCCCTGTTACTGTAAATGGAACACCGGCTGTGAGCTGGTCAAGGCCCTGCCATGACAAGGCCACTTGCATAGGACTCCAAATTAAAAAAAAAAAAAAGGCCTTTCTTATTGACTGAAAAACTGGTTGTGTTTTTCATATTTTTCACTTTCTGGAGCTGAATTATTAATAGGCAAAAATTAGGTGGGGCTTCATTGATATTCTCACCAGCTTTTACAAACCAAGAATCGGAAAGTGTGCCTCGGTGAGTTGCCTTTTGTTAGCAGTGTGGAGATGCAGGCAAAAGTGATCAGCGTGGTTTGTATTTGCAGCCGCCCCTCCCCTCTCTTCAGAGTCTCTCCTTCCCGGCTGCAAGGTGCGTCTTTAATGTGCGACACTGACAAGGCGTTTCAGCCATGCAGCTAATTAATATCATGCCGAGGCTCAATGTGACAGGTCCTTCAGACTCATAAATCAGAAACCACTAACAAATGTCGTTCCTTTTCTGATCTCTTTCTCTTGCTTTTTAATATGTTGATTTACTTTCAGTATGCATAACCAAAAAAGAAACAAACCAATAAAAATACTGATG</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-FN1-3]][[Category:NONHSAG030459]]
+
[[Category:Intergenic]][[Category:lnc-FN1-3]][[Category:NONHSAG030459]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 15:09, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000423530.1

Source

Gencode19

Same with

lnc-FN1-3:5,NONHSAT076771

Classification

intergenic

Length

2104 nt

Genomic location

chr2-:216484358..216692126

Exon number

9

Exons

216484358..216485120,216485841..216485916,216487409..216487484,216488835..216488958,216505954..216506542,216608537..216608637,216612027..216612117,216662083..216662314,216692075..216692126

Genome context

Sequence
000001 GATTCATCTT CCCTTCTATA TCTGAAAGGA TAAGCAGGCT GTGCTTTCCA GAGCTGGAGG GCAGTGGCGC GATCTCCGCT 000080
000081 CACCGCAAGC TCCGCCTCCC GGGTTCAAGC GATTCTCCTG CCTCAGCCTC CTGAGTAGCT GGGACTACAG GTGTGTGCTA 000160
000161 CCACGCCCAG CTAAATTTTT GTATTTTTGG TAGAGACGGG GTTTCACCAT GTTAGCCAGG ATGGTCTCAA TCTCCTGACC 000240
000241 TCGTGATCCA CCTGCCTCGG CCTCCCAAAG TGCTGGGATT GCAGGCCCAG AATACTCAGT ACCTCTCAAT GACCCTCAGA 000320
000321 CGCTGTAGGA AGAGGATTGG TTCACCTTTT AACCCAGAAT TTCTCACATT GAATGGACAG GATGCATTCC AAGAGGCCAG 000400
000401 AGTATGTGCA TCTCAGCTCC TGATGGTTTC CACCACCACC ATTACTTTCT CTATGTCAAG ATACCTGGGA AGCCGGTGTT 000480
000481 TCATTTGCAT TCTTGGAGCC CAGGAACTGT CTTCTACAAA CTTTTCTTCC TAGTACCATG TAAACGTACA CAGGAAACGT 000560
000561 TCAGAAAACA TCAGCCAAAT AGAAGAATAA GGAAATTCCT TCACTGACTA GATATTGGTG TTTGATTCTG TCCTGCTTTG 000640
000641 TACTCAATGG CTATTTCGGG GTTTCCATTG CGGAAAACTA TTTGGAAAAT TGCAAGCCAC GAGACAAGCC TCTAAGCTAC 000720
000721 TCCAGGATCA TTGAGGACTC TCCATGGGTT CTTATTGTTA AAGATCTTAA CTCCTCAAGC CACTGCATTT TTACTATATG 000800
000801 CCTTGAACTA CAAGATGTGT TAAGATTTAT AGGATAAGGT TCTCATCTCT AAAAACTCAT GGTCTCGATG GAGAAGCAGT 000880
000881 ATTTACACAC ATGGAGAAGT TGAGAGTACT TGAATGTGGA GTATAAAGTG TGCGATATTG ACAAGAAGCT CTACGAAAGT 000960
000961 TCAGGAAGAG GAGGAGCAAG TGAGGATGGA GATGGACTTT GCAGAATGGA GGAGAGGCAA AGAAACGGTT AGAAACAATC 001040
001041 TACATAATGA AAAGTCACTT TTGGGAGTTG TTTTAAGGCA GAGTATCATA TCGCATCAAA ACCGCTCCAT AAGTCCTGCC 001120
001121 ACTCCACGTG CAATGCCATG AACTTGAAGA AACTGCTGGT AAGAGAAAGC AAATGCTGTG ACCAGGCAAC TGCTGCAAAC 001200
001201 CAATGGGCTT TGGGGAACTG TGCTTCCCTT CAGAAAGGAA AGAGTATTTA ACGATGAAAA GGAAGGTGGA TTTTCCCTAC 001280
001281 TCATGCTTCC TAGAGATTTG GTGAGGATTT GTTGAGTCAT GGGACATTTC AGCTTGCCAA GCTTCTTTAG CTTTAGCACG 001360
001361 TGTTTCCACC AGTGTCCCTT AACGGAGAGG ATGACTATGT CACTGAAGAA GTGGAGGGGC TGAAAATGGA CTCAGCTCTT 001440
001441 GGCCCCTGTA GAGACTGCAA GACTCCGTGC ACAACGTGAC AGTCGGGGCT TCCTCTGAGC ACTGCGCCGT TCAGCCCTAT 001520
001521 TGCGCAACCT GCCACGCCCT GTTACTGTAA ATGGAACACC GGCTGTGAGC TGGTCAAGGC CCTGCCATGA CAAGGCCACT 001600
001601 TGCATAGGAC TCCAAATTAA AAAAAAAAAA AAGGCCTTTC TTATTGACTG AAAAACTGGT TGTGTTTTTC ATATTTTTCA 001680
001681 CTTTCTGGAG CTGAATTATT AATAGGCAAA AATTAGGTGG GGCTTCATTG ATATTCTCAC CAGCTTTTAC AAACCAAGAA 001760
001761 TCGGAAAGTG TGCCTCGGTG AGTTGCCTTT TGTTAGCAGT GTGGAGATGC AGGCAAAAGT GATCAGCGTG GTTTGTATTT 001840
001841 GCAGCCGCCC CTCCCCTCTC TTCAGAGTCT CTCCTTCCCG GCTGCAAGGT GCGTCTTTAA TGTGCGACAC TGACAAGGCG 001920
001921 TTTCAGCCAT GCAGCTAATT AATATCATGC CGAGGCTCAA TGTGACAGGT CCTTCAGACT CATAAATCAG AAACCACTAA 002000
002001 CAAATGTCGT TCCTTTTCTG ATCTCTTTCT CTTGCTTTTT AATATGTTGA TTTACTTTCA GTATGCATAA CCAAAAAAGA 002080
002081 AACAAACCAA TAAAAATACT GATG
[back to top]