Difference between revisions of "ENST00000424111.2"
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sequence = <dnaseq>GGCGTCTTGCCCCGCCTCCTGCAGGCGGCCCGGCGCGGTGTTTACCCGCGGTGCATGGTGGGGCGGTCTCCTTCGGCAACCCCGGCCGAACGGCCACCCAGAGGCTGTGCTGAGCTGGCGCAGCGGCAGCAGCATGAGCCGGACCCTCGCATCGGCCGTGCCCCTGTCGAGTCCCGACTACTACGAGAGGCTGGGCCAACTCCAGCACGGGCTGCGGGACAGTGAAAAGAAGAGATTGGACCTGGAAAAGAAACTTTATGAATATAATCAGTCTGATACATGCAGGTTGCAGTGCACGAGGGGATTAACTCAGGAACAGCCATGTCAAGAGGATTGTATCAACCAGCAACAATCTTTATGGGCCGCCAAATGTCAGCCATCTTAAGCATGAGAGATTTCAGTACAGAGCACAAATCTCCCCAGCCCACAAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTAGTAATGACACACAGTGCTTAAATAAGTCTGACAACATAGATGGAAAGGCATCTCTTCAGATTGGTGAGAAAATGCCAGTCACAGCCAGTGTATTGTCTGAGGAGGAACAAACTCATTGCTTGGAGATAGGAAGTAACACACGTCATGGCAAGAGTAATTTATCTGAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGAAAGATTAAGTCCAGAGAACAGAACCACTGATTTAAAGTGTGACAGTTCCAGCGGATCAGAGGGAGAAATACTGACACGGGAACATATTGAAGTTGAGGAAAAAAGAGCCAGCCCGCCAGTCTCTCCGATACCAGTTTCAGAATACTGTGAATCTGAAAATAAGTGGTCTCAAGAGAAGCATTCTCCTTGGGAAGGTGTTTCAGATCATCTTGCTCACAGGGAACCAAAGTCACAAAAGCCCTTCAGAAAAATGCAGGAAGAGGAGGAGGAAAGTTGGAGCACCAGCAGTGACCTTACCATTTCAATAAGTGAAGATGATCTGATTTTAGAGAGCCCAGAACCACAGCCAAATCCAGGTGGCAAGATGGAGGGAGAAGATGGAATAGAGGCCTTAAAATTAATCCATGCTGAGCAAGAAAGAGTTGCCCTATCCACTGAAAAAAATTGTATTTTGCAAACCCTAAGCTCTCCTGATTCAGAAAAGGAATCCTCCACTAACGCACCAACAAGAGAACCTGGACAAACACCAGACTCAGACGTACCGAGGCAGGTGGGTCAGCATGTTGCCACCTTGAAAGAACATGATAATTCTGTCAAAGAAGAGGCAACAGCATTATTGAGAAAAGCCCTTACAGAAGAGTGTGGCCGTAGGTCAGCTATTCACAGTAGTGAATCATCTTGCAGCTTGCCATCTATTCTGAATGACAATAGTGGAATAAAGGAAGCCAAACCTGCTGTATGGCTCAACAGTGTTCCTACAAGGGAACAAGAAGTTTCAAGTGGCTGTGGAGACAAGAGCAAGAAAGAAAATGTGGCTGCAGATATCCCAATCACAGAAACAGAAGCCTATCAGTTGCTGAAGAAGGCCACCCTTCAGGATAATACAAATCAAACTGAAAACAGGTTTCAAAAGACAGATGCTTCTGTGTCACACTTGTCAGGTTTGAATATTGGCAGCGGTGCATTCGAGACAAAGACAGCTAACAAAATTGCTTCGGAAGCTAGTTTTTCATCTAGTGAAGGAAGTCCTTTGTCAAGGCATGAAAACAAAAAGAAACCCGTGATCAATTTAAAATCTAATGCCCTCTGGGATGAGTCTGATGACAGTAACTCAGAAATTGAGGCTGCTTTACGCCCCAGAAACCATAACACCGATGATTCTGATGATTTTTATGACTAACGTGCTGTGACATTGGTTTCAAATAAAGTCTTTAAACAAACT</dnaseq>| | sequence = <dnaseq>GGCGTCTTGCCCCGCCTCCTGCAGGCGGCCCGGCGCGGTGTTTACCCGCGGTGCATGGTGGGGCGGTCTCCTTCGGCAACCCCGGCCGAACGGCCACCCAGAGGCTGTGCTGAGCTGGCGCAGCGGCAGCAGCATGAGCCGGACCCTCGCATCGGCCGTGCCCCTGTCGAGTCCCGACTACTACGAGAGGCTGGGCCAACTCCAGCACGGGCTGCGGGACAGTGAAAAGAAGAGATTGGACCTGGAAAAGAAACTTTATGAATATAATCAGTCTGATACATGCAGGTTGCAGTGCACGAGGGGATTAACTCAGGAACAGCCATGTCAAGAGGATTGTATCAACCAGCAACAATCTTTATGGGCCGCCAAATGTCAGCCATCTTAAGCATGAGAGATTTCAGTACAGAGCACAAATCTCCCCAGCCCACAAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTAGTAATGACACACAGTGCTTAAATAAGTCTGACAACATAGATGGAAAGGCATCTCTTCAGATTGGTGAGAAAATGCCAGTCACAGCCAGTGTATTGTCTGAGGAGGAACAAACTCATTGCTTGGAGATAGGAAGTAACACACGTCATGGCAAGAGTAATTTATCTGAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGAAAGATTAAGTCCAGAGAACAGAACCACTGATTTAAAGTGTGACAGTTCCAGCGGATCAGAGGGAGAAATACTGACACGGGAACATATTGAAGTTGAGGAAAAAAGAGCCAGCCCGCCAGTCTCTCCGATACCAGTTTCAGAATACTGTGAATCTGAAAATAAGTGGTCTCAAGAGAAGCATTCTCCTTGGGAAGGTGTTTCAGATCATCTTGCTCACAGGGAACCAAAGTCACAAAAGCCCTTCAGAAAAATGCAGGAAGAGGAGGAGGAAAGTTGGAGCACCAGCAGTGACCTTACCATTTCAATAAGTGAAGATGATCTGATTTTAGAGAGCCCAGAACCACAGCCAAATCCAGGTGGCAAGATGGAGGGAGAAGATGGAATAGAGGCCTTAAAATTAATCCATGCTGAGCAAGAAAGAGTTGCCCTATCCACTGAAAAAAATTGTATTTTGCAAACCCTAAGCTCTCCTGATTCAGAAAAGGAATCCTCCACTAACGCACCAACAAGAGAACCTGGACAAACACCAGACTCAGACGTACCGAGGCAGGTGGGTCAGCATGTTGCCACCTTGAAAGAACATGATAATTCTGTCAAAGAAGAGGCAACAGCATTATTGAGAAAAGCCCTTACAGAAGAGTGTGGCCGTAGGTCAGCTATTCACAGTAGTGAATCATCTTGCAGCTTGCCATCTATTCTGAATGACAATAGTGGAATAAAGGAAGCCAAACCTGCTGTATGGCTCAACAGTGTTCCTACAAGGGAACAAGAAGTTTCAAGTGGCTGTGGAGACAAGAGCAAGAAAGAAAATGTGGCTGCAGATATCCCAATCACAGAAACAGAAGCCTATCAGTTGCTGAAGAAGGCCACCCTTCAGGATAATACAAATCAAACTGAAAACAGGTTTCAAAAGACAGATGCTTCTGTGTCACACTTGTCAGGTTTGAATATTGGCAGCGGTGCATTCGAGACAAAGACAGCTAACAAAATTGCTTCGGAAGCTAGTTTTTCATCTAGTGAAGGAAGTCCTTTGTCAAGGCATGAAAACAAAAAGAAACCCGTGATCAATTTAAAATCTAATGCCCTCTGGGATGAGTCTGATGACAGTAACTCAGAAATTGAGGCTGCTTTACGCCCCAGAAACCATAACACCGATGATTCTGATGATTTTTATGACTAACGTGCTGTGACATTGGTTTCAAATAAAGTCTTTAAACAAACT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:ENSG00000088970.11]][[Category:lnc-XRN2-2]] | + | [[Category:Sense]][[Category:ENSG00000088970.11]][[Category:lnc-XRN2-2]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 15:10, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000424111.2 |
Source |
Gencode19 |
Same with |
lnc-XRN2-2:2 |
Classification |
sense |
Length |
1941 nt |
Genomic location |
chr20+:21106624..21227256 |
Exon number |
12 |
Exons |
21106624..21106845,21112738..21112800,21142512..21143148,21143491..21143800,21186130..21186163,21186166..21186222,21195173..21195338,21196221..21196286,21209649..21209753,21213372..21213468,21224883..21224926,21227117..21227256 |
Genome context |
|
Sequence |
000001 GGCGTCTTGC CCCGCCTCCT GCAGGCGGCC CGGCGCGGTG TTTACCCGCG GTGCATGGTG GGGCGGTCTC CTTCGGCAAC 000080
000081 CCCGGCCGAA CGGCCACCCA GAGGCTGTGC TGAGCTGGCG CAGCGGCAGC AGCATGAGCC GGACCCTCGC ATCGGCCGTG 000160 000161 CCCCTGTCGA GTCCCGACTA CTACGAGAGG CTGGGCCAAC TCCAGCACGG GCTGCGGGAC AGTGAAAAGA AGAGATTGGA 000240 000241 CCTGGAAAAG AAACTTTATG AATATAATCA GTCTGATACA TGCAGGTTGC AGTGCACGAG GGGATTAACT CAGGAACAGC 000320 000321 CATGTCAAGA GGATTGTATC AACCAGCAAC AATCTTTATG GGCCGCCAAA TGTCAGCCAT CTTAAGCATG AGAGATTTCA 000400 000401 GTACAGAGCA CAAATCTCCC CAGCCCACAA AGAACTTTTC AATTCCTGAC CCACATTCAC ACCGACAGAC AGCCCAGAGC 000480 000481 AGTAATGTGA CAGACAGCTG TGTAGTACAA ACTAGTAATG ACACACAGTG CTTAAATAAG TCTGACAACA TAGATGGAAA 000560 000561 GGCATCTCTT CAGATTGGTG AGAAAATGCC AGTCACAGCC AGTGTATTGT CTGAGGAGGA ACAAACTCAT TGCTTGGAGA 000640 000641 TAGGAAGTAA CACACGTCAT GGCAAGAGTA ATTTATCTGA AGGCAAAAAG TCTGCTGAAC TCAATTCCCC GTTACGGGAA 000720 000721 AGATTAAGTC CAGAGAACAG AACCACTGAT TTAAAGTGTG ACAGTTCCAG CGGATCAGAG GGAGAAATAC TGACACGGGA 000800 000801 ACATATTGAA GTTGAGGAAA AAAGAGCCAG CCCGCCAGTC TCTCCGATAC CAGTTTCAGA ATACTGTGAA TCTGAAAATA 000880 000881 AGTGGTCTCA AGAGAAGCAT TCTCCTTGGG AAGGTGTTTC AGATCATCTT GCTCACAGGG AACCAAAGTC ACAAAAGCCC 000960 000961 TTCAGAAAAA TGCAGGAAGA GGAGGAGGAA AGTTGGAGCA CCAGCAGTGA CCTTACCATT TCAATAAGTG AAGATGATCT 001040 001041 GATTTTAGAG AGCCCAGAAC CACAGCCAAA TCCAGGTGGC AAGATGGAGG GAGAAGATGG AATAGAGGCC TTAAAATTAA 001120 001121 TCCATGCTGA GCAAGAAAGA GTTGCCCTAT CCACTGAAAA AAATTGTATT TTGCAAACCC TAAGCTCTCC TGATTCAGAA 001200 001201 AAGGAATCCT CCACTAACGC ACCAACAAGA GAACCTGGAC AAACACCAGA CTCAGACGTA CCGAGGCAGG TGGGTCAGCA 001280 001281 TGTTGCCACC TTGAAAGAAC ATGATAATTC TGTCAAAGAA GAGGCAACAG CATTATTGAG AAAAGCCCTT ACAGAAGAGT 001360 001361 GTGGCCGTAG GTCAGCTATT CACAGTAGTG AATCATCTTG CAGCTTGCCA TCTATTCTGA ATGACAATAG TGGAATAAAG 001440 001441 GAAGCCAAAC CTGCTGTATG GCTCAACAGT GTTCCTACAA GGGAACAAGA AGTTTCAAGT GGCTGTGGAG ACAAGAGCAA 001520 001521 GAAAGAAAAT GTGGCTGCAG ATATCCCAAT CACAGAAACA GAAGCCTATC AGTTGCTGAA GAAGGCCACC CTTCAGGATA 001600 001601 ATACAAATCA AACTGAAAAC AGGTTTCAAA AGACAGATGC TTCTGTGTCA CACTTGTCAG GTTTGAATAT TGGCAGCGGT 001680 001681 GCATTCGAGA CAAAGACAGC TAACAAAATT GCTTCGGAAG CTAGTTTTTC ATCTAGTGAA GGAAGTCCTT TGTCAAGGCA 001760 001761 TGAAAACAAA AAGAAACCCG TGATCAATTT AAAATCTAAT GCCCTCTGGG ATGAGTCTGA TGACAGTAAC TCAGAAATTG 001840 001841 AGGCTGCTTT ACGCCCCAGA AACCATAACA CCGATGATTC TGATGATTTT TATGACTAAC GTGCTGTGAC ATTGGTTTCA 001920 001921 AATAAAGTCT TTAAACAAAC T |