Difference between revisions of "ENST00000432050.1"
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sequence = <dnaseq>TTTCACCTACCCTCTCTCCAATCCTTCCAAGAAACTCACAAAGCAGGGCTTTTTCTTGAACTTCTCTTCCTCACAACAGTTAAATCATCCATTTAAAGATGTCAAACAACCTCCGTGTTCTAAGAACTATTTACTGAGCTCTACGGAGACACAGCTACAAGCACCACATGCTGGACCCCTGAATATGGAGGGCCAACTACACTAGAAACACACACGCTAGCTGAGAAAGATGGTGGCTTAAGGAGATCACCAGTTTGTAGTAGAGGCCCACTCTCGGAAGGTTTGGTAAAAAGTTGTTTTGAATCATAATGTTGGCTTTATTGGCATGTTGAAACCATTTACCTCTGTAATTTTCCATTTGTTTTCCTTTCCAACTACCACTCCTCCTGCCTGATAAATAAATACCATTGCAAGATTA</dnaseq>| | sequence = <dnaseq>TTTCACCTACCCTCTCTCCAATCCTTCCAAGAAACTCACAAAGCAGGGCTTTTTCTTGAACTTCTCTTCCTCACAACAGTTAAATCATCCATTTAAAGATGTCAAACAACCTCCGTGTTCTAAGAACTATTTACTGAGCTCTACGGAGACACAGCTACAAGCACCACATGCTGGACCCCTGAATATGGAGGGCCAACTACACTAGAAACACACACGCTAGCTGAGAAAGATGGTGGCTTAAGGAGATCACCAGTTTGTAGTAGAGGCCCACTCTCGGAAGGTTTGGTAAAAAGTTGTTTTGAATCATAATGTTGGCTTTATTGGCATGTTGAAACCATTTACCTCTGTAATTTTCCATTTGTTTTCCTTTCCAACTACCACTCCTCCTGCCTGATAAATAAATACCATTGCAAGATTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]][[Category:lnc-B3GAT2-2]][[Category:NONHSAG044098]][[Category:ENSG00000232295.3]][[Category:Transcripts]] | + | [[Category:Antisense]][[Category:lnc-B3GAT2-2]][[Category:NONHSAG044098]][[Category:ENSG00000232295.3]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 15:24, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000432050.1 |
| Source |
Gencode19 |
| Same with |
lnc-B3GAT2-2:3,NONHSAT147419 |
| Classification |
antisense |
| Length |
418 nt |
| Genomic location |
chr6-:72004876..72020298 |
| Exon number |
5 |
| Exons |
72004876..72005050,72012673..72012748,72014051..72014093,72019999..72020076,72020253..72020298 |
| Genome context |
|
| Sequence |
000001 TTTCACCTAC CCTCTCTCCA ATCCTTCCAA GAAACTCACA AAGCAGGGCT TTTTCTTGAA CTTCTCTTCC TCACAACAGT 000080
000081 TAAATCATCC ATTTAAAGAT GTCAAACAAC CTCCGTGTTC TAAGAACTAT TTACTGAGCT CTACGGAGAC ACAGCTACAA 000160 000161 GCACCACATG CTGGACCCCT GAATATGGAG GGCCAACTAC ACTAGAAACA CACACGCTAG CTGAGAAAGA TGGTGGCTTA 000240 000241 AGGAGATCAC CAGTTTGTAG TAGAGGCCCA CTCTCGGAAG GTTTGGTAAA AAGTTGTTTT GAATCATAAT GTTGGCTTTA 000320 000321 TTGGCATGTT GAAACCATTT ACCTCTGTAA TTTTCCATTT GTTTTCCTTT CCAACTACCA CTCCTCCTGC CTGATAAATA 000400 000401 AATACCATTG CAAGATTA |
Predicted Small Protein
| Name | ENST00000432050.1_smProtein_98:136 |
| Length | 13 |
| Molecular weight | 1479.7461 |
| Aromaticity | 0.0833333333333 |
| Instability index | 77.8833333333 |
| Isoelectric point | 10.8344116211 |
| Runs | 4 |
| Runs residual | 0.0166666666667 |
| Runs probability | 0.0333200847908 |
| Amino acid sequence | MSNNLRVLRTIY |
| Secondary structure | LLLLHHHHHEEL |
| PRMN | - |
| PiMo | - |
