Difference between revisions of "ENST00000437785.1"

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sequence = <dnaseq>TTGGCCTTCAGCCCCTGCCTCGGCCAGAGGTTTCATTTTTAACTGAATATTTACGAAAGCTGAAAGCGTGCGAGGGGGTTGGGGTGGAAATAGCGGCTGCTTCTTTTCCAAGGACTTATTTAATGGGGATGTGTTCAAGGCAAGACCGAATTCAGAAGGATATCGACGTCGTGATCCAGAAGTCCAGAGCTGAGGACTGCCTGTTTGCAGGGCCCGCCTGGCAGGACGACTGAGCAAGTTCTTGGAAAACCAGAGATATTAGAGCGGTGAATCGCGCTGGTCACGTTGGACACCTGCGCGTTAGGAGATTCTGGAGCCAGAGGGAGAGACCCCAGAAACGCCCCGGTCGGCGACCCAGCCCGAGACGCCTGGGGTCCCAAGGGAAGCTGAACGCCCGGTGGGCTCCCGGGATGGTTCTTCCGGTTCTTTGTGCCGCCTTCACCCAGTGAAGGAGCCTGTATCCACCCTGCCCAGTCGCTGTTGGGCTGCTGCGGAGCTTCCGCTGCCATCTTCGGATCCTGTGTTCCGCCCGGGGCTCCACCAGGGCAGGGATGGTGGTGAGGGTCGCTCGTGGGTCCCCTGGCAGGGAGCAGGGTCTGGCACTCACAAGGGCGCACGACTAGGACTTGTCGAATGAATCCCTTGTCGCCTTTAGCTTTTAGTCCTTTGAAGAGAGGTTCTGATTCTACTTCCACCACAAGCTTCAGCATGGCAGTATCTGCCACCACTTGTTTTGGTCCAAGGGCAGAAATGAGCATCCTGGAAACCAATCAGTACTTGCGCTCTGAACTGGAAAAGTGCAAACAGAACTTCCAAGACCTCACAGAGAAATTCCTGACATCCAAAGCTACTGCCTACTGCCTGGCCAATCACCTGCAGAAATATAGATACATGATCCCTTAATTCAGGCTCAGGCTGAAGAACTGACCCACTTACAACAGAAGATACAGGAAGGGAGAGGTGTCTGCTACCTTTTCACCCAGCATGTGAAGAACACAGTCAAGTCTTTTGAGGGCCTTCTCAGGAACACTGACATTGCCTACTACCAGAGACAGAGATTCTGTGAGCAAATGGTACAAGGAAGCCAGCTGACAGAGATCCTTGTCAGAAAACTTGCCACAGAGTCTTGCTCTCTTACCCAAGCTGGAGTGCAGTGACATGATCTTGGCTGACTGCAATCTGTGCCTCCTGGGCTCAAGCAATCTTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGAATCAACCCCAATGCTCACTAACAAACTGAGAAGAAAAAAAATAATTACCCCCAACAACATCTGAGGAAGCACAACAGGGACAGACTTGAAGGCACCTGGGCAGTCCTCTGGTTTTGGAGTAGAGAAAATCACAATGGTAAGAAAAATGAAGACAGGCAAAAGCCACTGGCTCCCAGGATGCACCTCTAACCTCTACAGGCAAATCATAGATTCCATTGTCCAGCTGTATAATGAAAACAGAGTTCTCAGAGAAGAATACCGGAGACTCTCCCGACTTGCCTGAATCAAATTTCCAGAG</dnaseq>|
 
sequence = <dnaseq>TTGGCCTTCAGCCCCTGCCTCGGCCAGAGGTTTCATTTTTAACTGAATATTTACGAAAGCTGAAAGCGTGCGAGGGGGTTGGGGTGGAAATAGCGGCTGCTTCTTTTCCAAGGACTTATTTAATGGGGATGTGTTCAAGGCAAGACCGAATTCAGAAGGATATCGACGTCGTGATCCAGAAGTCCAGAGCTGAGGACTGCCTGTTTGCAGGGCCCGCCTGGCAGGACGACTGAGCAAGTTCTTGGAAAACCAGAGATATTAGAGCGGTGAATCGCGCTGGTCACGTTGGACACCTGCGCGTTAGGAGATTCTGGAGCCAGAGGGAGAGACCCCAGAAACGCCCCGGTCGGCGACCCAGCCCGAGACGCCTGGGGTCCCAAGGGAAGCTGAACGCCCGGTGGGCTCCCGGGATGGTTCTTCCGGTTCTTTGTGCCGCCTTCACCCAGTGAAGGAGCCTGTATCCACCCTGCCCAGTCGCTGTTGGGCTGCTGCGGAGCTTCCGCTGCCATCTTCGGATCCTGTGTTCCGCCCGGGGCTCCACCAGGGCAGGGATGGTGGTGAGGGTCGCTCGTGGGTCCCCTGGCAGGGAGCAGGGTCTGGCACTCACAAGGGCGCACGACTAGGACTTGTCGAATGAATCCCTTGTCGCCTTTAGCTTTTAGTCCTTTGAAGAGAGGTTCTGATTCTACTTCCACCACAAGCTTCAGCATGGCAGTATCTGCCACCACTTGTTTTGGTCCAAGGGCAGAAATGAGCATCCTGGAAACCAATCAGTACTTGCGCTCTGAACTGGAAAAGTGCAAACAGAACTTCCAAGACCTCACAGAGAAATTCCTGACATCCAAAGCTACTGCCTACTGCCTGGCCAATCACCTGCAGAAATATAGATACATGATCCCTTAATTCAGGCTCAGGCTGAAGAACTGACCCACTTACAACAGAAGATACAGGAAGGGAGAGGTGTCTGCTACCTTTTCACCCAGCATGTGAAGAACACAGTCAAGTCTTTTGAGGGCCTTCTCAGGAACACTGACATTGCCTACTACCAGAGACAGAGATTCTGTGAGCAAATGGTACAAGGAAGCCAGCTGACAGAGATCCTTGTCAGAAAACTTGCCACAGAGTCTTGCTCTCTTACCCAAGCTGGAGTGCAGTGACATGATCTTGGCTGACTGCAATCTGTGCCTCCTGGGCTCAAGCAATCTTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGAATCAACCCCAATGCTCACTAACAAACTGAGAAGAAAAAAAATAATTACCCCCAACAACATCTGAGGAAGCACAACAGGGACAGACTTGAAGGCACCTGGGCAGTCCTCTGGTTTTGGAGTAGAGAAAATCACAATGGTAAGAAAAATGAAGACAGGCAAAAGCCACTGGCTCCCAGGATGCACCTCTAACCTCTACAGGCAAATCATAGATTCCATTGTCCAGCTGTATAATGAAAACAGAGTTCTCAGAGAAGAATACCGGAGACTCTCCCGACTTGCCTGAATCAAATTTCCAGAG</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-PPIAL4B-2]][[Category:NONHSAG002671]][[Category:ENSG00000236943.2]][[Category:Transcripts]]
+
[[Category:Intergenic]][[Category:lnc-PPIAL4B-2]][[Category:NONHSAG002671]][[Category:ENSG00000236943.2]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 15:35, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000437785.1

Source

Gencode19

Same with

lnc-PPIAL4B-2:7,NONHSAT005794

Classification

intergenic

Length

1539 nt

Genomic location

chr1-:144456645..144520983

Exon number

8

Exons

144456645..144456766,144460821..144460872,144461309..144461433,144464534..144464651,144464864..144465099,144470035..144470244,144481300..144481765,144520774..144520983

Genome context

Sequence
000001 TTGGCCTTCA GCCCCTGCCT CGGCCAGAGG TTTCATTTTT AACTGAATAT TTACGAAAGC TGAAAGCGTG CGAGGGGGTT 000080
000081 GGGGTGGAAA TAGCGGCTGC TTCTTTTCCA AGGACTTATT TAATGGGGAT GTGTTCAAGG CAAGACCGAA TTCAGAAGGA 000160
000161 TATCGACGTC GTGATCCAGA AGTCCAGAGC TGAGGACTGC CTGTTTGCAG GGCCCGCCTG GCAGGACGAC TGAGCAAGTT 000240
000241 CTTGGAAAAC CAGAGATATT AGAGCGGTGA ATCGCGCTGG TCACGTTGGA CACCTGCGCG TTAGGAGATT CTGGAGCCAG 000320
000321 AGGGAGAGAC CCCAGAAACG CCCCGGTCGG CGACCCAGCC CGAGACGCCT GGGGTCCCAA GGGAAGCTGA ACGCCCGGTG 000400
000401 GGCTCCCGGG ATGGTTCTTC CGGTTCTTTG TGCCGCCTTC ACCCAGTGAA GGAGCCTGTA TCCACCCTGC CCAGTCGCTG 000480
000481 TTGGGCTGCT GCGGAGCTTC CGCTGCCATC TTCGGATCCT GTGTTCCGCC CGGGGCTCCA CCAGGGCAGG GATGGTGGTG 000560
000561 AGGGTCGCTC GTGGGTCCCC TGGCAGGGAG CAGGGTCTGG CACTCACAAG GGCGCACGAC TAGGACTTGT CGAATGAATC 000640
000641 CCTTGTCGCC TTTAGCTTTT AGTCCTTTGA AGAGAGGTTC TGATTCTACT TCCACCACAA GCTTCAGCAT GGCAGTATCT 000720
000721 GCCACCACTT GTTTTGGTCC AAGGGCAGAA ATGAGCATCC TGGAAACCAA TCAGTACTTG CGCTCTGAAC TGGAAAAGTG 000800
000801 CAAACAGAAC TTCCAAGACC TCACAGAGAA ATTCCTGACA TCCAAAGCTA CTGCCTACTG CCTGGCCAAT CACCTGCAGA 000880
000881 AATATAGATA CATGATCCCT TAATTCAGGC TCAGGCTGAA GAACTGACCC ACTTACAACA GAAGATACAG GAAGGGAGAG 000960
000961 GTGTCTGCTA CCTTTTCACC CAGCATGTGA AGAACACAGT CAAGTCTTTT GAGGGCCTTC TCAGGAACAC TGACATTGCC 001040
001041 TACTACCAGA GACAGAGATT CTGTGAGCAA ATGGTACAAG GAAGCCAGCT GACAGAGATC CTTGTCAGAA AACTTGCCAC 001120
001121 AGAGTCTTGC TCTCTTACCC AAGCTGGAGT GCAGTGACAT GATCTTGGCT GACTGCAATC TGTGCCTCCT GGGCTCAAGC 001200
001201 AATCTTCCCA CCTCAGCCTC CCAAGTAGCT GGGACTACAG AATCAACCCC AATGCTCACT AACAAACTGA GAAGAAAAAA 001280
001281 AATAATTACC CCCAACAACA TCTGAGGAAG CACAACAGGG ACAGACTTGA AGGCACCTGG GCAGTCCTCT GGTTTTGGAG 001360
001361 TAGAGAAAAT CACAATGGTA AGAAAAATGA AGACAGGCAA AAGCCACTGG CTCCCAGGAT GCACCTCTAA CCTCTACAGG 001440
001441 CAAATCATAG ATTCCATTGT CCAGCTGTAT AATGAAAACA GAGTTCTCAG AGAAGAATAC CGGAGACTCT CCCGACTTGC 001520
001521 CTGAATCAAA TTTCCAGAG
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