Difference between revisions of "ENST00000437829.1"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GTGCGCGCCTGCCTTGAGGCCAGGCCTCAGAGAAGGGTGTCCCAGATGTAGGCAAAGCGTCCTCCATGTGTTCCTGGAGGACCGTCCCAAGTCCTTCTCCATTCTCCCAACCTCTTGGGCCTGGAAGTCAGACAAGTACCGGTGATTGCCGGTTTCTTGTCTGATTTTTGCACTTCTCTGGCAAGCTGCCCCCTCTGAAGAGTTGACTATTTGGGAGTTACTCACTGATGGTTCAGCCACTTCCAGAACCTACCCCAAGAGCAAGACTTGAAACCAACTCGCACCCTCAAAGCTCCGGAAGCCATTCAGTGTTTCCATCTTGGCTGAGTGAGTTCTTCACTGAAACTCAATTTGACTTTGACAGTCATCTAATGAGAACTCAAAAGTCATTCTTGGTTCAGCCACAGTCAAAGAACTTGCAGAGCATTCTCTGACGAGGTCCTCAAGGACAACTGAGAGAAGGTCCCATTCCAGGTCTTGCCCAAGTCTTTCTGATTGGTGGGACTTAAATCACACCCAAAATTCCAGCTGCAGGAGAGCTCTGAGATTTCATCTTTCCAACCTCTGTGTGCTACGTGGGGGTTGGAGCACTTGCTGACAAGCCTTGCAACCACCATTGACAGGATGTCCTCCACCTTTTCAATCTGATTTGCTCTTTGCCATGCAGACCTGTGGATGAAGAGCCAGAGTCCTCCAAGGTGAAGCTGGACTGAATATTTCTGTCCATAAGACTATTAGAATCCC</dnaseq>| | sequence = <dnaseq>GTGCGCGCCTGCCTTGAGGCCAGGCCTCAGAGAAGGGTGTCCCAGATGTAGGCAAAGCGTCCTCCATGTGTTCCTGGAGGACCGTCCCAAGTCCTTCTCCATTCTCCCAACCTCTTGGGCCTGGAAGTCAGACAAGTACCGGTGATTGCCGGTTTCTTGTCTGATTTTTGCACTTCTCTGGCAAGCTGCCCCCTCTGAAGAGTTGACTATTTGGGAGTTACTCACTGATGGTTCAGCCACTTCCAGAACCTACCCCAAGAGCAAGACTTGAAACCAACTCGCACCCTCAAAGCTCCGGAAGCCATTCAGTGTTTCCATCTTGGCTGAGTGAGTTCTTCACTGAAACTCAATTTGACTTTGACAGTCATCTAATGAGAACTCAAAAGTCATTCTTGGTTCAGCCACAGTCAAAGAACTTGCAGAGCATTCTCTGACGAGGTCCTCAAGGACAACTGAGAGAAGGTCCCATTCCAGGTCTTGCCCAAGTCTTTCTGATTGGTGGGACTTAAATCACACCCAAAATTCCAGCTGCAGGAGAGCTCTGAGATTTCATCTTTCCAACCTCTGTGTGCTACGTGGGGGTTGGAGCACTTGCTGACAAGCCTTGCAACCACCATTGACAGGATGTCCTCCACCTTTTCAATCTGATTTGCTCTTTGCCATGCAGACCTGTGGATGAAGAGCCAGAGTCCTCCAAGGTGAAGCTGGACTGAATATTTCTGTCCATAAGACTATTAGAATCCC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:ENSG00000233098.4]][[Category:lnc-DHRS7B-5]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 15:35, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000437829.1 |
Source |
Gencode19 |
Same with |
lnc-DHRS7B-5:14 |
Classification |
intergenic |
Length |
744 nt |
Genomic location |
chr17+:20841851..20861660 |
Exon number |
5 |
Exons |
20841851..20841973,20852416..20852754,20859507..20859666,20859947..20860022,20861615..20861660 |
Genome context |
|
Sequence |
000001 GTGCGCGCCT GCCTTGAGGC CAGGCCTCAG AGAAGGGTGT CCCAGATGTA GGCAAAGCGT CCTCCATGTG TTCCTGGAGG 000080
000081 ACCGTCCCAA GTCCTTCTCC ATTCTCCCAA CCTCTTGGGC CTGGAAGTCA GACAAGTACC GGTGATTGCC GGTTTCTTGT 000160 000161 CTGATTTTTG CACTTCTCTG GCAAGCTGCC CCCTCTGAAG AGTTGACTAT TTGGGAGTTA CTCACTGATG GTTCAGCCAC 000240 000241 TTCCAGAACC TACCCCAAGA GCAAGACTTG AAACCAACTC GCACCCTCAA AGCTCCGGAA GCCATTCAGT GTTTCCATCT 000320 000321 TGGCTGAGTG AGTTCTTCAC TGAAACTCAA TTTGACTTTG ACAGTCATCT AATGAGAACT CAAAAGTCAT TCTTGGTTCA 000400 000401 GCCACAGTCA AAGAACTTGC AGAGCATTCT CTGACGAGGT CCTCAAGGAC AACTGAGAGA AGGTCCCATT CCAGGTCTTG 000480 000481 CCCAAGTCTT TCTGATTGGT GGGACTTAAA TCACACCCAA AATTCCAGCT GCAGGAGAGC TCTGAGATTT CATCTTTCCA 000560 000561 ACCTCTGTGT GCTACGTGGG GGTTGGAGCA CTTGCTGACA AGCCTTGCAA CCACCATTGA CAGGATGTCC TCCACCTTTT 000640 000641 CAATCTGATT TGCTCTTTGC CATGCAGACC TGTGGATGAA GAGCCAGAGT CCTCCAAGGT GAAGCTGGAC TGAATATTTC 000720 000721 TGTCCATAAG ACTATTAGAA TCCC |
Predicted Small Protein
Name | ENST00000437829.1_smProtein_227:433 |
Length | 69 |
Molecular weight | 7831.6792 |
Aromaticity | 0.102941176471 |
Instability index | 69.5661764706 |
Isoelectric point | 6.23724365234 |
Runs | 11 |
Runs residual | 0.0212639109698 |
Runs probability | 0.0281029692794 |
Amino acid sequence | MVQPLPEPTPRARLETNSHPQSSGSHSVFPSWLSEFFTETQFDFDSHLMRTQKSFLVQPQ SKNLQSIL |
Secondary structure | LLLLLLLLLLLLEELLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLHHHHHHLLEEEEEEL LLLHHHLL |
PRMN | - |
PiMo | - |