Difference between revisions of "ENST00000439321.1"

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sequence = <dnaseq>GGGTTAGGGCGTCCGCCCAGAGGGCGACTGCAATGAAGGAAATTGTGCCCTGCGACTTCCCGTAACAGAGCTGTGTGTCCACGCTCCCTTTTCCGAGCAGGCGCGGACGCTTGTGCCGGAAGGTCTCACCGCCGTCGCCCAGGCCGGATGGAGTGCAGTGGCGCGATCACGGCTCACTGCAGCCTCGACTTCCCAGGCTCAGAGATGGGTTTCACCATGTTTCCCAGCCTTGTCTCAAACTCCTGACCTCAAGTGATCCGCCGTCTTGGGTCTTCGAAAGTGCTGGGACAGCAGGAGTGAGCCACCGCATCTGGCCCGGAAAGTGTTTTGGAGCGTAGAAAAATGCAAATTATAGGGCTGCCTTCAAGGATCCCGAAGGACCCACAGATTTGCCGCATCAGGCTCCTATGCACGCCGGTAATTTGATGTGTTGAGATGCACTGCCCAGTGCGTTGTTTTTACTGGAGGAGCTTGTGTGCGGAGCTCCTTGCTAGTGTATGTGTTGGGATGGGAGAGAAGTGCGGGAGAACTATGAGATAATGCCCCCTGATCCTCAGGGTCTTAGGAGGTATGGTCGGAGAGGCTAAGCTAAAGTATGAAAGCCGTGTGTAGGCCCTTCTGTGTAGTGCAGAAAAGGTAGAGGTATGTGATTTGAAAGAGTAGGGATGACATGGAGGATGCGACTCCTGGTTGGATCTATAAACTAATGTCTTTGGAACGAAAGCACATGCAACCTTTTGAAAATGGATGGGTGATAATGAAAGACCATTCCAGAGAAGAAACACCATGGTGCAAAGGCTCAAGAGGCATACTGGAAGTACAATGAAGAGAGCAATCTAACTGAAATGGGAAAAAAAGAAACAAAGAGTAAAAAGTAAGATTTGATGAGAAAGATGGAATCGATTTTTAAATTTTTTTATCTACACAACAAAATTTATTATCTTAACCATTTTTGAGTGAATAATTCGTTAGTATTAAGTATATTTACCTCGTGCGGCCAGTCTCCAGAATTCTTTTCATCTTGCAAAACAAACCCCGAACCCATTAAACAATTTCTCATTCGCCATTTTCCAGCTAGCCTTGGTAACCTCCATTCTAGTTCTGTCTCTGTGAATTTGACTGTGTACCCCGTGTAAGTGGTATCATACAGTATTTGTATTTTTGTGACTGGCATATTTCACATAGCATAATCTCCTTGTGGTTTATCCATCTTGTAGCATGTGTCAGAATTTCCTTCCCTTTTAAGACTAAATAATATTCCATTGTGTGTATA</dnaseq>|
 
sequence = <dnaseq>GGGTTAGGGCGTCCGCCCAGAGGGCGACTGCAATGAAGGAAATTGTGCCCTGCGACTTCCCGTAACAGAGCTGTGTGTCCACGCTCCCTTTTCCGAGCAGGCGCGGACGCTTGTGCCGGAAGGTCTCACCGCCGTCGCCCAGGCCGGATGGAGTGCAGTGGCGCGATCACGGCTCACTGCAGCCTCGACTTCCCAGGCTCAGAGATGGGTTTCACCATGTTTCCCAGCCTTGTCTCAAACTCCTGACCTCAAGTGATCCGCCGTCTTGGGTCTTCGAAAGTGCTGGGACAGCAGGAGTGAGCCACCGCATCTGGCCCGGAAAGTGTTTTGGAGCGTAGAAAAATGCAAATTATAGGGCTGCCTTCAAGGATCCCGAAGGACCCACAGATTTGCCGCATCAGGCTCCTATGCACGCCGGTAATTTGATGTGTTGAGATGCACTGCCCAGTGCGTTGTTTTTACTGGAGGAGCTTGTGTGCGGAGCTCCTTGCTAGTGTATGTGTTGGGATGGGAGAGAAGTGCGGGAGAACTATGAGATAATGCCCCCTGATCCTCAGGGTCTTAGGAGGTATGGTCGGAGAGGCTAAGCTAAAGTATGAAAGCCGTGTGTAGGCCCTTCTGTGTAGTGCAGAAAAGGTAGAGGTATGTGATTTGAAAGAGTAGGGATGACATGGAGGATGCGACTCCTGGTTGGATCTATAAACTAATGTCTTTGGAACGAAAGCACATGCAACCTTTTGAAAATGGATGGGTGATAATGAAAGACCATTCCAGAGAAGAAACACCATGGTGCAAAGGCTCAAGAGGCATACTGGAAGTACAATGAAGAGAGCAATCTAACTGAAATGGGAAAAAAAGAAACAAAGAGTAAAAAGTAAGATTTGATGAGAAAGATGGAATCGATTTTTAAATTTTTTTATCTACACAACAAAATTTATTATCTTAACCATTTTTGAGTGAATAATTCGTTAGTATTAAGTATATTTACCTCGTGCGGCCAGTCTCCAGAATTCTTTTCATCTTGCAAAACAAACCCCGAACCCATTAAACAATTTCTCATTCGCCATTTTCCAGCTAGCCTTGGTAACCTCCATTCTAGTTCTGTCTCTGTGAATTTGACTGTGTACCCCGTGTAAGTGGTATCATACAGTATTTGTATTTTTGTGACTGGCATATTTCACATAGCATAATCTCCTTGTGGTTTATCCATCTTGTAGCATGTGTCAGAATTTCCTTCCCTTTTAAGACTAAATAATATTCCATTGTGTGTATA</dnaseq>|
 
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}}
[[Category:Intergenic]][[Category:ENSG00000236859.2]][[Category:lnc-TSN-2]]
+
[[Category:Intergenic]][[Category:ENSG00000236859.2]][[Category:lnc-TSN-2]][[Category:Transcripts]]

Latest revision as of 15:38, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000439321.1

Source

Gencode19

Same with

lnc-TSN-2:4

Classification

intergenic

Length

1273 nt

Genomic location

chr2+:122407559..122409114

Exon number

3

Exons

122407559..122407679,122407877..122407957,122408044..122409114

Genome context

Sequence
000001 GGGTTAGGGC GTCCGCCCAG AGGGCGACTG CAATGAAGGA AATTGTGCCC TGCGACTTCC CGTAACAGAG CTGTGTGTCC 000080
000081 ACGCTCCCTT TTCCGAGCAG GCGCGGACGC TTGTGCCGGA AGGTCTCACC GCCGTCGCCC AGGCCGGATG GAGTGCAGTG 000160
000161 GCGCGATCAC GGCTCACTGC AGCCTCGACT TCCCAGGCTC AGAGATGGGT TTCACCATGT TTCCCAGCCT TGTCTCAAAC 000240
000241 TCCTGACCTC AAGTGATCCG CCGTCTTGGG TCTTCGAAAG TGCTGGGACA GCAGGAGTGA GCCACCGCAT CTGGCCCGGA 000320
000321 AAGTGTTTTG GAGCGTAGAA AAATGCAAAT TATAGGGCTG CCTTCAAGGA TCCCGAAGGA CCCACAGATT TGCCGCATCA 000400
000401 GGCTCCTATG CACGCCGGTA ATTTGATGTG TTGAGATGCA CTGCCCAGTG CGTTGTTTTT ACTGGAGGAG CTTGTGTGCG 000480
000481 GAGCTCCTTG CTAGTGTATG TGTTGGGATG GGAGAGAAGT GCGGGAGAAC TATGAGATAA TGCCCCCTGA TCCTCAGGGT 000560
000561 CTTAGGAGGT ATGGTCGGAG AGGCTAAGCT AAAGTATGAA AGCCGTGTGT AGGCCCTTCT GTGTAGTGCA GAAAAGGTAG 000640
000641 AGGTATGTGA TTTGAAAGAG TAGGGATGAC ATGGAGGATG CGACTCCTGG TTGGATCTAT AAACTAATGT CTTTGGAACG 000720
000721 AAAGCACATG CAACCTTTTG AAAATGGATG GGTGATAATG AAAGACCATT CCAGAGAAGA AACACCATGG TGCAAAGGCT 000800
000801 CAAGAGGCAT ACTGGAAGTA CAATGAAGAG AGCAATCTAA CTGAAATGGG AAAAAAAGAA ACAAAGAGTA AAAAGTAAGA 000880
000881 TTTGATGAGA AAGATGGAAT CGATTTTTAA ATTTTTTTAT CTACACAACA AAATTTATTA TCTTAACCAT TTTTGAGTGA 000960
000961 ATAATTCGTT AGTATTAAGT ATATTTACCT CGTGCGGCCA GTCTCCAGAA TTCTTTTCAT CTTGCAAAAC AAACCCCGAA 001040
001041 CCCATTAAAC AATTTCTCAT TCGCCATTTT CCAGCTAGCC TTGGTAACCT CCATTCTAGT TCTGTCTCTG TGAATTTGAC 001120
001121 TGTGTACCCC GTGTAAGTGG TATCATACAG TATTTGTATT TTTGTGACTG GCATATTTCA CATAGCATAA TCTCCTTGTG 001200
001201 GTTTATCCAT CTTGTAGCAT GTGTCAGAAT TTCCTTCCCT TTTAAGACTA AATAATATTC CATTGTGTGT ATA
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