Difference between revisions of "ENST00000447911.2"
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sequence = <dnaseq>GACCCCAGAGGAAGACGTGCATTGGGTCCGCTGGCCCCAGGCCAGTGTCTCTCAGCCATGTGCTCAACACCTGGTGAGCTGAAGCTCAGGCCCTTCCTGGCATCCTGGTCTCCTGCACTGAGCTGTGGTCTGCAGCGGCATCTGGCATCCAGGCCAGCCTCCTTGGTGGGCCGTGAACTGAATGGTGGCGCTGGCCTGTGCCCAGTATATCTGGGTTCGGTGGCTGAGAGAGCTTTTGTTGCCCTGTGTCCGTGACGGGCCAGTGTTCTGCATGCATCCCATCACATGGATCCATGGAGGATGTTGAGCCCAGAGGAAGACTTGCACTGGGCCCAATGGCCCCAGGTCAGCGTCCATCAGCCAGGTGTCCAGCCCCTGGTGCACTGAAGATCGGGCCCTTCCTGGTGCCCTGGTCTCCTGCATTGAGCTGTGGTGAGCACATCCGGATCCTGCTGGATGCGTGTGCGGGGAAGGGGGTGCCCTGGGTTGGGTCAATGAGAACCTTATATTGTCCTGAAGAGAGGTGATAACTTAAAAATCATGCTCAATAATAGGATTACGCTGAGGCCCAGTCTAGGTGAGAGGTTTGGAAGAGGATGCTGGGATTCCGAGGTCCCCAGGAGGGCCCCTGTATTTTTGGCTGGAGACCTGGAGGCCCTGAAGGGCATCTTGTGGGTGCCCAACCCTGTCTCTGCGCTCCTCCTTGAGGCAGCCCAGGCTCCCTGTGCAGGCTTGGTGTCAGCCCTCCAGTTCCCTGGGTTTGAGGCACATGGGAAGCTCCTTTCTGAGCCCCGTTCTCCTCTTGTGTCTTT</dnaseq>| | sequence = <dnaseq>GACCCCAGAGGAAGACGTGCATTGGGTCCGCTGGCCCCAGGCCAGTGTCTCTCAGCCATGTGCTCAACACCTGGTGAGCTGAAGCTCAGGCCCTTCCTGGCATCCTGGTCTCCTGCACTGAGCTGTGGTCTGCAGCGGCATCTGGCATCCAGGCCAGCCTCCTTGGTGGGCCGTGAACTGAATGGTGGCGCTGGCCTGTGCCCAGTATATCTGGGTTCGGTGGCTGAGAGAGCTTTTGTTGCCCTGTGTCCGTGACGGGCCAGTGTTCTGCATGCATCCCATCACATGGATCCATGGAGGATGTTGAGCCCAGAGGAAGACTTGCACTGGGCCCAATGGCCCCAGGTCAGCGTCCATCAGCCAGGTGTCCAGCCCCTGGTGCACTGAAGATCGGGCCCTTCCTGGTGCCCTGGTCTCCTGCATTGAGCTGTGGTGAGCACATCCGGATCCTGCTGGATGCGTGTGCGGGGAAGGGGGTGCCCTGGGTTGGGTCAATGAGAACCTTATATTGTCCTGAAGAGAGGTGATAACTTAAAAATCATGCTCAATAATAGGATTACGCTGAGGCCCAGTCTAGGTGAGAGGTTTGGAAGAGGATGCTGGGATTCCGAGGTCCCCAGGAGGGCCCCTGTATTTTTGGCTGGAGACCTGGAGGCCCTGAAGGGCATCTTGTGGGTGCCCAACCCTGTCTCTGCGCTCCTCCTTGAGGCAGCCCAGGCTCCCTGTGCAGGCTTGGTGTCAGCCCTCCAGTTCCCTGGGTTTGAGGCACATGGGAAGCTCCTTTCTGAGCCCCGTTCTCCTCTTGTGTCTTT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:ENSG00000224078.8]] | + | [[Category:Intergenic]][[Category:ENSG00000224078.8]][[Category:NONHSAG016302]][[Category:Transcripts]] |
Latest revision as of 15:54, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000447911.2 |
| Source |
Gencode19 |
| Same with |
NONHSAT041082 |
| Classification |
intergenic |
| Length |
812 nt |
| Genomic location |
chr15+:25425461..25427855 |
| Exon number |
4 |
| Exons |
25425461..25425587,25426957..25427042,25427166..25427252,25427344..25427855 |
| Genome context |
|
| Sequence |
000001 GACCCCAGAG GAAGACGTGC ATTGGGTCCG CTGGCCCCAG GCCAGTGTCT CTCAGCCATG TGCTCAACAC CTGGTGAGCT 000080
000081 GAAGCTCAGG CCCTTCCTGG CATCCTGGTC TCCTGCACTG AGCTGTGGTC TGCAGCGGCA TCTGGCATCC AGGCCAGCCT 000160 000161 CCTTGGTGGG CCGTGAACTG AATGGTGGCG CTGGCCTGTG CCCAGTATAT CTGGGTTCGG TGGCTGAGAG AGCTTTTGTT 000240 000241 GCCCTGTGTC CGTGACGGGC CAGTGTTCTG CATGCATCCC ATCACATGGA TCCATGGAGG ATGTTGAGCC CAGAGGAAGA 000320 000321 CTTGCACTGG GCCCAATGGC CCCAGGTCAG CGTCCATCAG CCAGGTGTCC AGCCCCTGGT GCACTGAAGA TCGGGCCCTT 000400 000401 CCTGGTGCCC TGGTCTCCTG CATTGAGCTG TGGTGAGCAC ATCCGGATCC TGCTGGATGC GTGTGCGGGG AAGGGGGTGC 000480 000481 CCTGGGTTGG GTCAATGAGA ACCTTATATT GTCCTGAAGA GAGGTGATAA CTTAAAAATC ATGCTCAATA ATAGGATTAC 000560 000561 GCTGAGGCCC AGTCTAGGTG AGAGGTTTGG AAGAGGATGC TGGGATTCCG AGGTCCCCAG GAGGGCCCCT GTATTTTTGG 000640 000641 CTGGAGACCT GGAGGCCCTG AAGGGCATCT TGTGGGTGCC CAACCCTGTC TCTGCGCTCC TCCTTGAGGC AGCCCAGGCT 000720 000721 CCCTGTGCAG GCTTGGTGTC AGCCCTCCAG TTCCCTGGGT TTGAGGCACA TGGGAAGCTC CTTTCTGAGC CCCGTTCTCC 000800 000801 TCTTGTGTCT TT |
Predicted Small Protein
| Name | ENST00000447911.2_smProtein_293:526 |
| Length | 78 |
| Molecular weight | 8238.6223 |
| Aromaticity | 0.0519480519481 |
| Instability index | 59.8701298701 |
| Isoelectric point | 8.48931884766 |
| Runs | 11 |
| Runs residual | 0.00677583286279 |
| Runs probability | 0.0451735157619 |
| Amino acid sequence | MEDVEPRGRLALGPMAPGQRPSARCPAPGALKIGPFLVPWSPALSCGEHIRILLDACAGK GVPWVGSMRTLYCPEER |
| Secondary structure | LLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLHHHHHHHHHHHLL LLLEELLLLEEELLLLL |
| PRMN | - |
| PiMo | - |
