Difference between revisions of "ENST00000456083.1"
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sequence = <dnaseq>TCCCTTACCCTGACCCTAACCTTCCAACCGTTGATTCCTGCAGCAATCTTCCCTAAGGGAGACACCCCGGCTGTAGGCTCACTTCCTCTCCCAAGTCCCATTCCTTTCACAAGAGTCAAATCCCTACAGTGGATTCCTGGACCGTTTTTTCTAAAAGAAGATCCCAGTCCTCTGGCTTGCCCCTCCCGTCGTGACTCCCATATTTGATGGGTCTGAATGAAAATCTGATGAAACAGATGTTACTTGAAGCTGAGTGACTTTCTCAGGGTCAAGCAAATAAGTAAATGGAGGAGCCAGAATTATACCCCAGGATCCCCATCACAAGGAGGGGAGGGCTACCATCCCAGCTGCAAACTCTCATTCAAGGTTTATGCTGCAGCCAGCAGTGTCCTTGGAGTCTAGTTCAAAGCTGAAGAGAGTGAACCATGGAACTGGGAGCCATTGGCGGAGAGGCTGGCCTGAAGGAAGGGAAGTGTTTCAGCCAGAATGTACTGACGCACAACCAGGAAACCACAAGACTG</dnaseq>| | sequence = <dnaseq>TCCCTTACCCTGACCCTAACCTTCCAACCGTTGATTCCTGCAGCAATCTTCCCTAAGGGAGACACCCCGGCTGTAGGCTCACTTCCTCTCCCAAGTCCCATTCCTTTCACAAGAGTCAAATCCCTACAGTGGATTCCTGGACCGTTTTTTCTAAAAGAAGATCCCAGTCCTCTGGCTTGCCCCTCCCGTCGTGACTCCCATATTTGATGGGTCTGAATGAAAATCTGATGAAACAGATGTTACTTGAAGCTGAGTGACTTTCTCAGGGTCAAGCAAATAAGTAAATGGAGGAGCCAGAATTATACCCCAGGATCCCCATCACAAGGAGGGGAGGGCTACCATCCCAGCTGCAAACTCTCATTCAAGGTTTATGCTGCAGCCAGCAGTGTCCTTGGAGTCTAGTTCAAAGCTGAAGAGAGTGAACCATGGAACTGGGAGCCATTGGCGGAGAGGCTGGCCTGAAGGAAGGGAAGTGTTTCAGCCAGAATGTACTGACGCACAACCAGGAAACCACAAGACTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-KIFAP3-2]][[Category:NONHSAG003431]] | + | [[Category:Intergenic]][[Category:lnc-KIFAP3-2]][[Category:NONHSAG003431]][[Category:ENSG00000231407.1]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 16:13, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000456083.1 |
| Source |
Gencode19 |
| Same with |
lnc-KIFAP3-2:1,NONHSAT007501 |
| Classification |
intergenic |
| Length |
521 nt |
| Genomic location |
chr1-:170431350..170501788 |
| Exon number |
3 |
| Exons |
170431350..170431560,170486735..170486844,170501589..170501788 |
| Genome context |
|
| Sequence |
000001 TCCCTTACCC TGACCCTAAC CTTCCAACCG TTGATTCCTG CAGCAATCTT CCCTAAGGGA GACACCCCGG CTGTAGGCTC 000080
000081 ACTTCCTCTC CCAAGTCCCA TTCCTTTCAC AAGAGTCAAA TCCCTACAGT GGATTCCTGG ACCGTTTTTT CTAAAAGAAG 000160 000161 ATCCCAGTCC TCTGGCTTGC CCCTCCCGTC GTGACTCCCA TATTTGATGG GTCTGAATGA AAATCTGATG AAACAGATGT 000240 000241 TACTTGAAGC TGAGTGACTT TCTCAGGGTC AAGCAAATAA GTAAATGGAG GAGCCAGAAT TATACCCCAG GATCCCCATC 000320 000321 ACAAGGAGGG GAGGGCTACC ATCCCAGCTG CAAACTCTCA TTCAAGGTTT ATGCTGCAGC CAGCAGTGTC CTTGGAGTCT 000400 000401 AGTTCAAAGC TGAAGAGAGT GAACCATGGA ACTGGGAGCC ATTGGCGGAG AGGCTGGCCT GAAGGAAGGG AAGTGTTTCA 000480 000481 GCCAGAATGT ACTGACGCAC AACCAGGAAA CCACAAGACT G |
Predicted Small Protein
| Name | ENST00000456083.1_smProtein_284:412 |
| Length | 43 |
| Molecular weight | 4757.4937 |
| Aromaticity | 0.047619047619 |
| Instability index | 84.5166666667 |
| Isoelectric point | 5.97894287109 |
| Runs | 9 |
| Runs residual | 0.038125376733 |
| Runs probability | 0.0404031482464 |
| Amino acid sequence | MEEPELYPRIPITRRGGLPSQLQTLIQGLCCSQQCPWSLVQS |
| Secondary structure | LLLLLLLLLLLEELLLLLHHHHHHHHHHLEELLLLLLLLEEL |
| PRMN | - |
| PiMo | - |
