Difference between revisions of "ENST00000458468.1"

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sequence = <dnaseq>ATAAAGGACTTGTCTAGGGGAGAGCCTATGGATCTGAGAACGCTGTCTGGGCTTGGTACCAAGAGCTGGTATTTCACAGCAGCGACCGCCTCACAGACGAGCTGTGGGAAGCAGGAGGGAGACTCTCTCTTAGGGTGCCACTACTATGGAGACACAGCTGGGCTGAACAAGATTTGCTTCAAACGACAACAAGAGAGACAGAAAGTATCTGGTTCAACCGCTGCCCGAGCAGGCAGGCACCAGAAGAGCTAGCAGCCAATCCGGCCATGCTCGAAGCCAGCTCTGCAGCTCAGCCAATCAGTGACATCATTGCTTTCTTTAGCTTGCCCATGGTGATGTGAAGATGAGAAGAAATAGCAAGGCCCAACCAGTTCTTCATCTGGAGACAGTTCAACGTTCTGCAAACCAGATCTTCAGGAATTTTACTGGGATAATTATCCAAATAAATTGCAAGCATTCTATCCAAATGGACATCCATAAAAATTCATCAGAGAGCATTTTACTACTGAGCTGCAAAGGGAAAAACTTAAAATGGATATGAAAAGTGAAGAAAGTGATCATAGGAGAAAACCATTTCAGGTGTCTGATGATTTGTGAGCCTCAAGTGACTACTCTGTGGAATCATCTGTCCTTGCCTTTGAATTAGCTTTCCCTAGGCCATGAGTCAACATTAGTAGTTTATACATCCAAATTGATGACAAGAGCACCTCAAAGGCAGCAGCCTCAAGGAGCAGCCATGGCCCCAGACTTGTCGCACGGATGCAGAAAACTTAATGGAGGAGGCTGAGGTCAGAATGGGAAGAGTTTTTAAAAAATAAAAAGGGGAGCTAATATGTGAGGAACTGATTGCTGTGCATTATTTTCCACTGAACAGACCTTCTTTTAACTTCTAATCTCAAGCACATAGCAGCTGTTGTTTTCATATTAAAGATCAGTAAGTGTTTGTTGAATGAATGTATAAATTCTTCCCCAATCTCTGTTCCATGTAATAAGAACTAAGTTAGCATTCAATTATAAAGAGGACTTAGAAAGTCTGCAGACATTTTTGATCAAAAATCCTTTTAACTGTCTTCTTATGGTTCCCGGTAACACCTAAGCCCAAAAAACTCAGGTCATTTCTTGCCTGTACTGTTGCAATAGCCTCATAATAACTAGTCTTCTCCTTTATCAACCACAGTCGTCTCCGCTACACAAAGAAGAGAGGGTGCTAATCTAAAGTGTAAATTATTTTAAATCAGCACCCTTCTTGTAATTTCCCAGTGGTTTTTCCTGTCATAAGAATAACATGCAAAATTCCTTGCTTGCAAAGCCAGGTATGACCTTGCCCCGTCTACCTTACTGGCATCGTCTCTCATGACTCTTCCCCTTTTTCACTCTCCATCTTGCCTTTTCCCAACCATGCCTGCTAGTGAGCCTTAGCCCTTGTGTTTTCTCTGCCAGGGATGCATGACTGGCTTCTTTACTTTATTCTGATCTCTCTGCTCAAATGTCATCTTTTTAGAGATAGCTTTCCTAAACATCTTTAAAAGTACCCCATGAACTGTGAAACACCTTTCCTGCTTTTTCTTCATAGTACTTATCACTTCCTGATATTATGTTAGACAACAAGCAAATAAGTATATGCTGTTCCCACTAAAATATAAGCTCCATTTGAACAGGAGCCTTGATTATTCCTGAGTATACCCCTAGTGCCCAGAACCTAGTAGGGCTTTAATAAATATTAGATTCATTTGTTGAATGAAAAAATGAATGAATAATTGAATAAAGATATCCAGGTAGAGTGTCCGGGCAGCCCAACCTATGTGAAGCCAGTACAAGAATGTTTCTGTGACATAGTGAGCGCAATTATTCCTCTAAATGATGAACTTGCATGAGTACACAAGGATAAAATTAAGCACGTAGTTTAGATTTCTGCAAGTCTCTTCCTCAGATTGAGGAAAAACAAAGAAATTGAGCTTATTCTCACCTCATTCTTACATGAACTAAATCCAGAATAAAGCATCATTTAAATACCAAGCACATCCCTACCTCAGCCACTCATGGAATACTTTATCTGTAAAGGGACAGATAGATAGTAAATATTTTTGGCTTTGGGGACCGTACAGTCTGTGTCGCCACTACTCAGCACTTCTGTTGAGGTGTGGAATCAGCCCTAGACAACACATAAACAAATGGGTGTGGCTGTGTTCCAATAAAATGTTATTTATAAAACTAGGAAATCAGCAGATTTAGTCCACAGGCTGTAGTTTGCTGACCCTTGAATTAGAGAGTCTTCCCCAAATCCTCTTCCCAAGTTATTGAAAGAATGCCCATAGGACCATAGCTCCCTCACCTGGTTCTTTCAAGAAATGAGACAAATTCAGGGATGGTTGGAGGGTGGAACGCCTACCTGTGACATGACTATTGAGCCTGATTTCTTTCCTTTTATCTCTTTAAAGTGAGTCAGGTCTTAACTTTAAACTGTCTCTAAAGTGGCAATAACTGGGCCATGTCAAATACTCCCAATGACAAAATTTCTTCTTGGAGAATGAATGAGGGTTGCATACAGTGGTGTGTTGGTAAATGTTTAGCAACTGGCTCTCTTACTGATTTCTGTAGTGTAAATTCTCCCATCCTGGCCATCTGAAACTACCAATATGATGTCACTTGATGTAGAGTTGGGAAAAGACAGTCTCTTGAATAAGTATGAGCTGGTTCCAGCCCACTGCTGAACACATATTTAAAAGCTACAATAGCTCTGCTCACTGCCATTGCAGAGTCTGGAGGAAAGAGTAGCAGGCTTGATAGGAGCAATTGGCTGAATAATCTTTTGCAATGCCAATAAATAATGAAAAAGTATATAAATATAACGCTGTATAGAAAGCTCTCAAGTTCAGTGTTTGGTTAAAATACATACTCAGTAAATGGTAGCTATTATTGTCTTAGTTTAAGTTATTGCAAGCATTAAAATTAAATGTTTAGCTACAGACTCAATCCAGTTTTAATGTCATTGTGTTAATAAGGCCTCTTAACATTGAAGCAACAAAGATAAAGGAATTTTTTTGTAGCTATTCACGATTCTGCCCAGCTCAAGGTAAAGATAGCAACAAAATACTCCAACCAGAATAAAAGAAGTCTCCACTTGACTGCAGCTCTTCGCAACACTTCACAAGGGTCAAGCTGTGTTAGTTTCCTTCAGTGTTAAACAGAATGCATCTTAAGAGAATAGTTCAATTATTGATTGAATAGTAGGTTCAAGTTGACTATAATCCCAACTAATACACTCTAAGACCAGGGATGGGCCGACAGAAGGGTAAAGTTTTCCACTCAAGTCTCGAGGCAAACACTCAGATAGAAGTAGTAATATGGATGCCTTCTATTATTTGGTCAATACAATACTGTTCCAGCCCAGTTGTGCAAAACTGGTGAAATAAAAGGCAAAAATATTGACAACAGTTTGGGTAACTGGATTCCAAAATGGGCATCCATCTAAGAG</dnaseq>|
 
sequence = <dnaseq>ATAAAGGACTTGTCTAGGGGAGAGCCTATGGATCTGAGAACGCTGTCTGGGCTTGGTACCAAGAGCTGGTATTTCACAGCAGCGACCGCCTCACAGACGAGCTGTGGGAAGCAGGAGGGAGACTCTCTCTTAGGGTGCCACTACTATGGAGACACAGCTGGGCTGAACAAGATTTGCTTCAAACGACAACAAGAGAGACAGAAAGTATCTGGTTCAACCGCTGCCCGAGCAGGCAGGCACCAGAAGAGCTAGCAGCCAATCCGGCCATGCTCGAAGCCAGCTCTGCAGCTCAGCCAATCAGTGACATCATTGCTTTCTTTAGCTTGCCCATGGTGATGTGAAGATGAGAAGAAATAGCAAGGCCCAACCAGTTCTTCATCTGGAGACAGTTCAACGTTCTGCAAACCAGATCTTCAGGAATTTTACTGGGATAATTATCCAAATAAATTGCAAGCATTCTATCCAAATGGACATCCATAAAAATTCATCAGAGAGCATTTTACTACTGAGCTGCAAAGGGAAAAACTTAAAATGGATATGAAAAGTGAAGAAAGTGATCATAGGAGAAAACCATTTCAGGTGTCTGATGATTTGTGAGCCTCAAGTGACTACTCTGTGGAATCATCTGTCCTTGCCTTTGAATTAGCTTTCCCTAGGCCATGAGTCAACATTAGTAGTTTATACATCCAAATTGATGACAAGAGCACCTCAAAGGCAGCAGCCTCAAGGAGCAGCCATGGCCCCAGACTTGTCGCACGGATGCAGAAAACTTAATGGAGGAGGCTGAGGTCAGAATGGGAAGAGTTTTTAAAAAATAAAAAGGGGAGCTAATATGTGAGGAACTGATTGCTGTGCATTATTTTCCACTGAACAGACCTTCTTTTAACTTCTAATCTCAAGCACATAGCAGCTGTTGTTTTCATATTAAAGATCAGTAAGTGTTTGTTGAATGAATGTATAAATTCTTCCCCAATCTCTGTTCCATGTAATAAGAACTAAGTTAGCATTCAATTATAAAGAGGACTTAGAAAGTCTGCAGACATTTTTGATCAAAAATCCTTTTAACTGTCTTCTTATGGTTCCCGGTAACACCTAAGCCCAAAAAACTCAGGTCATTTCTTGCCTGTACTGTTGCAATAGCCTCATAATAACTAGTCTTCTCCTTTATCAACCACAGTCGTCTCCGCTACACAAAGAAGAGAGGGTGCTAATCTAAAGTGTAAATTATTTTAAATCAGCACCCTTCTTGTAATTTCCCAGTGGTTTTTCCTGTCATAAGAATAACATGCAAAATTCCTTGCTTGCAAAGCCAGGTATGACCTTGCCCCGTCTACCTTACTGGCATCGTCTCTCATGACTCTTCCCCTTTTTCACTCTCCATCTTGCCTTTTCCCAACCATGCCTGCTAGTGAGCCTTAGCCCTTGTGTTTTCTCTGCCAGGGATGCATGACTGGCTTCTTTACTTTATTCTGATCTCTCTGCTCAAATGTCATCTTTTTAGAGATAGCTTTCCTAAACATCTTTAAAAGTACCCCATGAACTGTGAAACACCTTTCCTGCTTTTTCTTCATAGTACTTATCACTTCCTGATATTATGTTAGACAACAAGCAAATAAGTATATGCTGTTCCCACTAAAATATAAGCTCCATTTGAACAGGAGCCTTGATTATTCCTGAGTATACCCCTAGTGCCCAGAACCTAGTAGGGCTTTAATAAATATTAGATTCATTTGTTGAATGAAAAAATGAATGAATAATTGAATAAAGATATCCAGGTAGAGTGTCCGGGCAGCCCAACCTATGTGAAGCCAGTACAAGAATGTTTCTGTGACATAGTGAGCGCAATTATTCCTCTAAATGATGAACTTGCATGAGTACACAAGGATAAAATTAAGCACGTAGTTTAGATTTCTGCAAGTCTCTTCCTCAGATTGAGGAAAAACAAAGAAATTGAGCTTATTCTCACCTCATTCTTACATGAACTAAATCCAGAATAAAGCATCATTTAAATACCAAGCACATCCCTACCTCAGCCACTCATGGAATACTTTATCTGTAAAGGGACAGATAGATAGTAAATATTTTTGGCTTTGGGGACCGTACAGTCTGTGTCGCCACTACTCAGCACTTCTGTTGAGGTGTGGAATCAGCCCTAGACAACACATAAACAAATGGGTGTGGCTGTGTTCCAATAAAATGTTATTTATAAAACTAGGAAATCAGCAGATTTAGTCCACAGGCTGTAGTTTGCTGACCCTTGAATTAGAGAGTCTTCCCCAAATCCTCTTCCCAAGTTATTGAAAGAATGCCCATAGGACCATAGCTCCCTCACCTGGTTCTTTCAAGAAATGAGACAAATTCAGGGATGGTTGGAGGGTGGAACGCCTACCTGTGACATGACTATTGAGCCTGATTTCTTTCCTTTTATCTCTTTAAAGTGAGTCAGGTCTTAACTTTAAACTGTCTCTAAAGTGGCAATAACTGGGCCATGTCAAATACTCCCAATGACAAAATTTCTTCTTGGAGAATGAATGAGGGTTGCATACAGTGGTGTGTTGGTAAATGTTTAGCAACTGGCTCTCTTACTGATTTCTGTAGTGTAAATTCTCCCATCCTGGCCATCTGAAACTACCAATATGATGTCACTTGATGTAGAGTTGGGAAAAGACAGTCTCTTGAATAAGTATGAGCTGGTTCCAGCCCACTGCTGAACACATATTTAAAAGCTACAATAGCTCTGCTCACTGCCATTGCAGAGTCTGGAGGAAAGAGTAGCAGGCTTGATAGGAGCAATTGGCTGAATAATCTTTTGCAATGCCAATAAATAATGAAAAAGTATATAAATATAACGCTGTATAGAAAGCTCTCAAGTTCAGTGTTTGGTTAAAATACATACTCAGTAAATGGTAGCTATTATTGTCTTAGTTTAAGTTATTGCAAGCATTAAAATTAAATGTTTAGCTACAGACTCAATCCAGTTTTAATGTCATTGTGTTAATAAGGCCTCTTAACATTGAAGCAACAAAGATAAAGGAATTTTTTTGTAGCTATTCACGATTCTGCCCAGCTCAAGGTAAAGATAGCAACAAAATACTCCAACCAGAATAAAAGAAGTCTCCACTTGACTGCAGCTCTTCGCAACACTTCACAAGGGTCAAGCTGTGTTAGTTTCCTTCAGTGTTAAACAGAATGCATCTTAAGAGAATAGTTCAATTATTGATTGAATAGTAGGTTCAAGTTGACTATAATCCCAACTAATACACTCTAAGACCAGGGATGGGCCGACAGAAGGGTAAAGTTTTCCACTCAAGTCTCGAGGCAAACACTCAGATAGAAGTAGTAATATGGATGCCTTCTATTATTTGGTCAATACAATACTGTTCCAGCCCAGTTGTGCAAAACTGGTGAAATAAAAGGCAAAAATATTGACAACAGTTTGGGTAACTGGATTCCAAAATGGGCATCCATCTAAGAG</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-USP25-2]][[Category:NONHSAG032423]][[Category:ENSG00000215386.6]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 16:18, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000458468.1

Source

Gencode19

Same with

lnc-USP25-2:1,NONHSAT081220

Classification

intergenic

Length

3475 nt

Genomic location

chr21+:17442842..17982094

Exon number

8

Exons

17442842..17442868,17443434..17443718,17553911..17554007,17603376..17603435,17859810..17859858,17909699..17909759,17966660..17966774,17979314..17982094

Genome context

Sequence
000001 ATAAAGGACT TGTCTAGGGG AGAGCCTATG GATCTGAGAA CGCTGTCTGG GCTTGGTACC AAGAGCTGGT ATTTCACAGC 000080
000081 AGCGACCGCC TCACAGACGA GCTGTGGGAA GCAGGAGGGA GACTCTCTCT TAGGGTGCCA CTACTATGGA GACACAGCTG 000160
000161 GGCTGAACAA GATTTGCTTC AAACGACAAC AAGAGAGACA GAAAGTATCT GGTTCAACCG CTGCCCGAGC AGGCAGGCAC 000240
000241 CAGAAGAGCT AGCAGCCAAT CCGGCCATGC TCGAAGCCAG CTCTGCAGCT CAGCCAATCA GTGACATCAT TGCTTTCTTT 000320
000321 AGCTTGCCCA TGGTGATGTG AAGATGAGAA GAAATAGCAA GGCCCAACCA GTTCTTCATC TGGAGACAGT TCAACGTTCT 000400
000401 GCAAACCAGA TCTTCAGGAA TTTTACTGGG ATAATTATCC AAATAAATTG CAAGCATTCT ATCCAAATGG ACATCCATAA 000480
000481 AAATTCATCA GAGAGCATTT TACTACTGAG CTGCAAAGGG AAAAACTTAA AATGGATATG AAAAGTGAAG AAAGTGATCA 000560
000561 TAGGAGAAAA CCATTTCAGG TGTCTGATGA TTTGTGAGCC TCAAGTGACT ACTCTGTGGA ATCATCTGTC CTTGCCTTTG 000640
000641 AATTAGCTTT CCCTAGGCCA TGAGTCAACA TTAGTAGTTT ATACATCCAA ATTGATGACA AGAGCACCTC AAAGGCAGCA 000720
000721 GCCTCAAGGA GCAGCCATGG CCCCAGACTT GTCGCACGGA TGCAGAAAAC TTAATGGAGG AGGCTGAGGT CAGAATGGGA 000800
000801 AGAGTTTTTA AAAAATAAAA AGGGGAGCTA ATATGTGAGG AACTGATTGC TGTGCATTAT TTTCCACTGA ACAGACCTTC 000880
000881 TTTTAACTTC TAATCTCAAG CACATAGCAG CTGTTGTTTT CATATTAAAG ATCAGTAAGT GTTTGTTGAA TGAATGTATA 000960
000961 AATTCTTCCC CAATCTCTGT TCCATGTAAT AAGAACTAAG TTAGCATTCA ATTATAAAGA GGACTTAGAA AGTCTGCAGA 001040
001041 CATTTTTGAT CAAAAATCCT TTTAACTGTC TTCTTATGGT TCCCGGTAAC ACCTAAGCCC AAAAAACTCA GGTCATTTCT 001120
001121 TGCCTGTACT GTTGCAATAG CCTCATAATA ACTAGTCTTC TCCTTTATCA ACCACAGTCG TCTCCGCTAC ACAAAGAAGA 001200
001201 GAGGGTGCTA ATCTAAAGTG TAAATTATTT TAAATCAGCA CCCTTCTTGT AATTTCCCAG TGGTTTTTCC TGTCATAAGA 001280
001281 ATAACATGCA AAATTCCTTG CTTGCAAAGC CAGGTATGAC CTTGCCCCGT CTACCTTACT GGCATCGTCT CTCATGACTC 001360
001361 TTCCCCTTTT TCACTCTCCA TCTTGCCTTT TCCCAACCAT GCCTGCTAGT GAGCCTTAGC CCTTGTGTTT TCTCTGCCAG 001440
001441 GGATGCATGA CTGGCTTCTT TACTTTATTC TGATCTCTCT GCTCAAATGT CATCTTTTTA GAGATAGCTT TCCTAAACAT 001520
001521 CTTTAAAAGT ACCCCATGAA CTGTGAAACA CCTTTCCTGC TTTTTCTTCA TAGTACTTAT CACTTCCTGA TATTATGTTA 001600
001601 GACAACAAGC AAATAAGTAT ATGCTGTTCC CACTAAAATA TAAGCTCCAT TTGAACAGGA GCCTTGATTA TTCCTGAGTA 001680
001681 TACCCCTAGT GCCCAGAACC TAGTAGGGCT TTAATAAATA TTAGATTCAT TTGTTGAATG AAAAAATGAA TGAATAATTG 001760
001761 AATAAAGATA TCCAGGTAGA GTGTCCGGGC AGCCCAACCT ATGTGAAGCC AGTACAAGAA TGTTTCTGTG ACATAGTGAG 001840
001841 CGCAATTATT CCTCTAAATG ATGAACTTGC ATGAGTACAC AAGGATAAAA TTAAGCACGT AGTTTAGATT TCTGCAAGTC 001920
001921 TCTTCCTCAG ATTGAGGAAA AACAAAGAAA TTGAGCTTAT TCTCACCTCA TTCTTACATG AACTAAATCC AGAATAAAGC 002000
002001 ATCATTTAAA TACCAAGCAC ATCCCTACCT CAGCCACTCA TGGAATACTT TATCTGTAAA GGGACAGATA GATAGTAAAT 002080
002081 ATTTTTGGCT TTGGGGACCG TACAGTCTGT GTCGCCACTA CTCAGCACTT CTGTTGAGGT GTGGAATCAG CCCTAGACAA 002160
002161 CACATAAACA AATGGGTGTG GCTGTGTTCC AATAAAATGT TATTTATAAA ACTAGGAAAT CAGCAGATTT AGTCCACAGG 002240
002241 CTGTAGTTTG CTGACCCTTG AATTAGAGAG TCTTCCCCAA ATCCTCTTCC CAAGTTATTG AAAGAATGCC CATAGGACCA 002320
002321 TAGCTCCCTC ACCTGGTTCT TTCAAGAAAT GAGACAAATT CAGGGATGGT TGGAGGGTGG AACGCCTACC TGTGACATGA 002400
002401 CTATTGAGCC TGATTTCTTT CCTTTTATCT CTTTAAAGTG AGTCAGGTCT TAACTTTAAA CTGTCTCTAA AGTGGCAATA 002480
002481 ACTGGGCCAT GTCAAATACT CCCAATGACA AAATTTCTTC TTGGAGAATG AATGAGGGTT GCATACAGTG GTGTGTTGGT 002560
002561 AAATGTTTAG CAACTGGCTC TCTTACTGAT TTCTGTAGTG TAAATTCTCC CATCCTGGCC ATCTGAAACT ACCAATATGA 002640
002641 TGTCACTTGA TGTAGAGTTG GGAAAAGACA GTCTCTTGAA TAAGTATGAG CTGGTTCCAG CCCACTGCTG AACACATATT 002720
002721 TAAAAGCTAC AATAGCTCTG CTCACTGCCA TTGCAGAGTC TGGAGGAAAG AGTAGCAGGC TTGATAGGAG CAATTGGCTG 002800
002801 AATAATCTTT TGCAATGCCA ATAAATAATG AAAAAGTATA TAAATATAAC GCTGTATAGA AAGCTCTCAA GTTCAGTGTT 002880
002881 TGGTTAAAAT ACATACTCAG TAAATGGTAG CTATTATTGT CTTAGTTTAA GTTATTGCAA GCATTAAAAT TAAATGTTTA 002960
002961 GCTACAGACT CAATCCAGTT TTAATGTCAT TGTGTTAATA AGGCCTCTTA ACATTGAAGC AACAAAGATA AAGGAATTTT 003040
003041 TTTGTAGCTA TTCACGATTC TGCCCAGCTC AAGGTAAAGA TAGCAACAAA ATACTCCAAC CAGAATAAAA GAAGTCTCCA 003120
003121 CTTGACTGCA GCTCTTCGCA ACACTTCACA AGGGTCAAGC TGTGTTAGTT TCCTTCAGTG TTAAACAGAA TGCATCTTAA 003200
003201 GAGAATAGTT CAATTATTGA TTGAATAGTA GGTTCAAGTT GACTATAATC CCAACTAATA CACTCTAAGA CCAGGGATGG 003280
003281 GCCGACAGAA GGGTAAAGTT TTCCACTCAA GTCTCGAGGC AAACACTCAG ATAGAAGTAG TAATATGGAT GCCTTCTATT 003360
003361 ATTTGGTCAA TACAATACTG TTCCAGCCCA GTTGTGCAAA ACTGGTGAAA TAAAAGGCAA AAATATTGAC AACAGTTTGG 003440
003441 GTAACTGGAT TCCAAAATGG GCATCCATCT AAGAG
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