Difference between revisions of "ENST00000476125.1"
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sequence = <dnaseq>TCAGCTGGTCCCTCTTCTCAGGTGTAGATCACCTATTATAATTTTACCTAATTTTGATACTCTGATAAGGAAAGTCCCAGGACTTATCAGCTGGGATAGGCCTCACTTACAAGACAGCTCTGTTCAGTATTTGGAAGAAAGCCTGACAGGTTTCTTCGGAAAAGTGGCCATCCATGGAATGAATGAAATGTTCTCTTTCTATTCCAGGGATTGCAGTGGCAAAGCTAGGCTAGGTCTTGGAGGCTGGTGTAAGGCGATGTGGGTGAAGGCAGGAGGCTGATGGAAAGACTGGGGGGAAGAAAAGCCGAAATGGATTCACGGTGCCTTGGATGAAGGACGAGAGGGGAACTGCAAGCTCCTTCAACTGGTTCTGTCCGGTGAGAAGTGATCAAGCTTGGGCTGACAAGAGGCTCAGGGAGCCCTCACGTTCTTTCGCTTTTTTACCTGCCAATCAAACTGCTACAAGACAACACCCTGATCTGGCATGGACATGTCCGTGTTTACCTTAATATTACACCTGGATTAAACAGAAAACAGTGCTGTATTTTGAAGAGCGCCGAATATGTATGCATTTTGAGAAACCCAATCTCACCCTTTCCGGGTTCCCAAGAACTAAAACAAGCCATAACTTGAGAGAAAAAGGAGAACCTTCGGGGGGCAGGAAGGTTGATTGGAAATAACTTAAGGAAAGTCTGCAGAATTCTTTTTTTTACAACTTTTCTGAGTTTCCAGTGGGTATATTTAGTGTGAGTTTGACAGTAACAGGCTAGGGAGGGCAGAGATTGGAGAAATTGGGGGTCGGGGGAGTGATTATGGGAAGAAGGTTAGTAAGGAACAAAACAATGCACCGTTTTGTAAAGATAATAAATGGAACGTGGCTGGTAGATACTATTCAGTACATTTTCTTAGGGTGAGTAAGGGTAGACCAGGGGAGGAGGGGGCGGAGAGAGTGTTACAGAAGAAAGAAAATAAGTAACCC</dnaseq>| | sequence = <dnaseq>TCAGCTGGTCCCTCTTCTCAGGTGTAGATCACCTATTATAATTTTACCTAATTTTGATACTCTGATAAGGAAAGTCCCAGGACTTATCAGCTGGGATAGGCCTCACTTACAAGACAGCTCTGTTCAGTATTTGGAAGAAAGCCTGACAGGTTTCTTCGGAAAAGTGGCCATCCATGGAATGAATGAAATGTTCTCTTTCTATTCCAGGGATTGCAGTGGCAAAGCTAGGCTAGGTCTTGGAGGCTGGTGTAAGGCGATGTGGGTGAAGGCAGGAGGCTGATGGAAAGACTGGGGGGAAGAAAAGCCGAAATGGATTCACGGTGCCTTGGATGAAGGACGAGAGGGGAACTGCAAGCTCCTTCAACTGGTTCTGTCCGGTGAGAAGTGATCAAGCTTGGGCTGACAAGAGGCTCAGGGAGCCCTCACGTTCTTTCGCTTTTTTACCTGCCAATCAAACTGCTACAAGACAACACCCTGATCTGGCATGGACATGTCCGTGTTTACCTTAATATTACACCTGGATTAAACAGAAAACAGTGCTGTATTTTGAAGAGCGCCGAATATGTATGCATTTTGAGAAACCCAATCTCACCCTTTCCGGGTTCCCAAGAACTAAAACAAGCCATAACTTGAGAGAAAAAGGAGAACCTTCGGGGGGCAGGAAGGTTGATTGGAAATAACTTAAGGAAAGTCTGCAGAATTCTTTTTTTTACAACTTTTCTGAGTTTCCAGTGGGTATATTTAGTGTGAGTTTGACAGTAACAGGCTAGGGAGGGCAGAGATTGGAGAAATTGGGGGTCGGGGGAGTGATTATGGGAAGAAGGTTAGTAAGGAACAAAACAATGCACCGTTTTGTAAAGATAATAAATGGAACGTGGCTGGTAGATACTATTCAGTACATTTTCTTAGGGTGAGTAAGGGTAGACCAGGGGAGGAGGGGGCGGAGAGAGTGTTACAGAAGAAAGAAAATAAGTAACCC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-SOX2-1]][[Category:NONHSAG036783]] | + | [[Category:Intergenic]][[Category:lnc-SOX2-1]][[Category:NONHSAG036783]][[Category:ENSG00000242808.3]][[Category:Transcripts]] |
Latest revision as of 16:23, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000476125.1 |
| Source |
Gencode19 |
| Same with |
lnc-SOX2-1:15,NONHSAT093498 |
| Classification |
intergenic |
| Length |
979 nt |
| Genomic location |
chr3+:181328397..181428083 |
| Exon number |
4 |
| Exons |
181328397..181328533,181328649..181328717,181417386..181417671,181427597..181428083 |
| Genome context |
|
| Sequence |
000001 TCAGCTGGTC CCTCTTCTCA GGTGTAGATC ACCTATTATA ATTTTACCTA ATTTTGATAC TCTGATAAGG AAAGTCCCAG 000080
000081 GACTTATCAG CTGGGATAGG CCTCACTTAC AAGACAGCTC TGTTCAGTAT TTGGAAGAAA GCCTGACAGG TTTCTTCGGA 000160 000161 AAAGTGGCCA TCCATGGAAT GAATGAAATG TTCTCTTTCT ATTCCAGGGA TTGCAGTGGC AAAGCTAGGC TAGGTCTTGG 000240 000241 AGGCTGGTGT AAGGCGATGT GGGTGAAGGC AGGAGGCTGA TGGAAAGACT GGGGGGAAGA AAAGCCGAAA TGGATTCACG 000320 000321 GTGCCTTGGA TGAAGGACGA GAGGGGAACT GCAAGCTCCT TCAACTGGTT CTGTCCGGTG AGAAGTGATC AAGCTTGGGC 000400 000401 TGACAAGAGG CTCAGGGAGC CCTCACGTTC TTTCGCTTTT TTACCTGCCA ATCAAACTGC TACAAGACAA CACCCTGATC 000480 000481 TGGCATGGAC ATGTCCGTGT TTACCTTAAT ATTACACCTG GATTAAACAG AAAACAGTGC TGTATTTTGA AGAGCGCCGA 000560 000561 ATATGTATGC ATTTTGAGAA ACCCAATCTC ACCCTTTCCG GGTTCCCAAG AACTAAAACA AGCCATAACT TGAGAGAAAA 000640 000641 AGGAGAACCT TCGGGGGGCA GGAAGGTTGA TTGGAAATAA CTTAAGGAAA GTCTGCAGAA TTCTTTTTTT TACAACTTTT 000720 000721 CTGAGTTTCC AGTGGGTATA TTTAGTGTGA GTTTGACAGT AACAGGCTAG GGAGGGCAGA GATTGGAGAA ATTGGGGGTC 000800 000801 GGGGGAGTGA TTATGGGAAG AAGGTTAGTA AGGAACAAAA CAATGCACCG TTTTGTAAAG ATAATAAATG GAACGTGGCT 000880 000881 GGTAGATACT ATTCAGTACA TTTTCTTAGG GTGAGTAAGG GTAGACCAGG GGAGGAGGGG GCGGAGAGAG TGTTACAGAA 000960 000961 GAAAGAAAAT AAGTAACCC |
