Difference between revisions of "ENST00000481578.1"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AGACCCCCAAAAGAGGCTGCAGATTCTTAGTGGACAGCTCTCATATCCCCTCCAGGGAAAATGATGAAAAATGTCTTCAGAAAAATAGCTTTATGAAGGCAAGAGGACTTTTTGCACCTGCAAGACATGTCTGAAAGCTCCTCAGGTCAAAACACAAGTAGTCAAGAGATTTGTCCATCTAATTCATCATACTACTCTGATCCAAGTGAGACCCACACTGGGTCAGCTCCATCAAGGAGAAGAACATTCCACCCACGTTTGGATTCTGGAATATCATCCTTGCTTCCATCAGATTCTTGTAAGTACCTCACTTGGCACAAGGTAGACATGACGTTCAAGGAAGTCAACTGCGTTGCCCAAGAGTAAGAGAAGGAATCTCTGAAGAAGAGCAACTTTTCAGACAGGTAGAGTGTGCCTTGCTCCCAAGGAAAAGAGTTCTTGAAAAAAACAAATGGGAAACATGGCTACAAGAAAACTGGGAAGACTGCAAGAATTTGAACATTTCATTTCAGGGTTTGGGGGATCCTTACCAAGTTGAAAATTTTAACAGAATTCTTAGAAGACTAATTCGAGTTGAAACCCTCTGGTTAGTGGATAATTCACTGGTGGACTTAAGTGCCATAAGATTGCCAAGGCAAAAACATGCTAACTGACAAGAAAATCATGGGTTTTATACAAGGATAACAAGTGCTGGGTTGCTTAGCTATGAGGAAGGCTAGGCTCACTGCATACCAGAAGATGTACAGCGTTGGAGAATTCAGGGATTTTTATCAACAATCAAACTATATTTGTGGAAATTTTGTGCATAAGTGCCAAAGATGGCTGACATCGGACCACATTCTATTTAACTCAACTGAATGACACCAAGCTCTCATCCTAAAACTTATAGTTACATCCACCCTTCTGAAATATTTAATTATTCTCCAATACACTGGAGGTAATAGGTATAAAAAGAATGAGCATGTGCAACTTAGTATCTCATATCTAATTTTGTGTCCCAAGTTCATTCTTCCCCTGAATGTCCCATGTCTACCAGGTGCAGGATTATCTGGATGGGTCAGTTCAAAACAATTTCAGGGAATAAATTGTGTAGGGGACTCAATTTTCTGAGACAGAAACATAATGTGAATAACTCCTTTGTTAGAAAATAATTTCAGTGACAGAAAGCCTTTCAGTTCATAAAGAAAACTTACATATCAACAAGCCTAGCTCCTCACTAGTCCCAGTGAATGCTTACATCAATCAGCTCTACAATATCCAGTAAAGGACTTTCCAATTCGCCTTTGAATAAACTGAGGTATTGGAAACATCTAAGAAAATGGTTTTTAATTCTTCCTAATCTTCAGGGAGTTCTTCCTTATATTGAGCTGATATCTGCCCTCTGTAACTTTCAACTAATTATTCAAATCTCTCAAGTGATTATAATTAATTCCATCTTATAAGGAATTTTTCTCAGCTTCCAGCCTCTTGAAAATACTCTGATATTTTCTCTAATATTCAAGTGGAAATGTAAATGGGTAACGTAAGAGTCTGTGGGGTTAGGAGGGTGGAGGAAAGGTAAGGGAAAGCTAATGAGAAATAACCAAAGCAAGAAAAAGAATTTTATTTTCTTCAAGTTCTTTGTACATCCAAAGTGGAAGATTCCTAAAATAAATTCCCCATACCACATTTTAAAAATTAGGTTAGCAAGCTTACTTTTTAATTTATTTAGAAGCCAACTACTTCCATTTATTATTTCTTTCCAGAATAGAACAATTATCACTAATTGTTTGTCATTATAATGCCAAACTATGTTAATAGATGCCTATTTTTTTAAAGGCTAATTGCAATCATGAAACCAAATATCTAATTAGTTTTAGAGCTTTGGACCACATGCATCAATATTTGAATCATTCAGGTGTATATTTGCTTTCTGCTTTTTTGTCTCTTCAAAAGAAGTATTATATGCATTCTGTTTATAATTTCTAAATGGTCATTTCAAAACTGATTATACGAGTTTATACAAATCATACTGAAATTTGTTGCTTAAAAAATCTTCATTTTTCTCTAAGCTCTCAGTGTCCTTGAGCTATATATATTTTATGGCAATTTTTACTTAATAGTTTGTATGCTAGTTATTTTTGACAATGACTACTAAAATGCAAGTTTCTTCAAGGGCAGATTCACCTTAGTTCTTCTTTATACCCCTCAAAAACCTCAGGGTTATTCTCAATAAGTATTGAGTAGGTGAGTGAACTTTGGATGTATACTCCTTGAAATTATATTTCTGGAGCTGGAAAACTTTAAAAAAATGTATGTCATGAGTCTAAAGAAATAAACATTATATGGCTGAAAAAATACTTTGTGAAAA</dnaseq>| | sequence = <dnaseq>AGACCCCCAAAAGAGGCTGCAGATTCTTAGTGGACAGCTCTCATATCCCCTCCAGGGAAAATGATGAAAAATGTCTTCAGAAAAATAGCTTTATGAAGGCAAGAGGACTTTTTGCACCTGCAAGACATGTCTGAAAGCTCCTCAGGTCAAAACACAAGTAGTCAAGAGATTTGTCCATCTAATTCATCATACTACTCTGATCCAAGTGAGACCCACACTGGGTCAGCTCCATCAAGGAGAAGAACATTCCACCCACGTTTGGATTCTGGAATATCATCCTTGCTTCCATCAGATTCTTGTAAGTACCTCACTTGGCACAAGGTAGACATGACGTTCAAGGAAGTCAACTGCGTTGCCCAAGAGTAAGAGAAGGAATCTCTGAAGAAGAGCAACTTTTCAGACAGGTAGAGTGTGCCTTGCTCCCAAGGAAAAGAGTTCTTGAAAAAAACAAATGGGAAACATGGCTACAAGAAAACTGGGAAGACTGCAAGAATTTGAACATTTCATTTCAGGGTTTGGGGGATCCTTACCAAGTTGAAAATTTTAACAGAATTCTTAGAAGACTAATTCGAGTTGAAACCCTCTGGTTAGTGGATAATTCACTGGTGGACTTAAGTGCCATAAGATTGCCAAGGCAAAAACATGCTAACTGACAAGAAAATCATGGGTTTTATACAAGGATAACAAGTGCTGGGTTGCTTAGCTATGAGGAAGGCTAGGCTCACTGCATACCAGAAGATGTACAGCGTTGGAGAATTCAGGGATTTTTATCAACAATCAAACTATATTTGTGGAAATTTTGTGCATAAGTGCCAAAGATGGCTGACATCGGACCACATTCTATTTAACTCAACTGAATGACACCAAGCTCTCATCCTAAAACTTATAGTTACATCCACCCTTCTGAAATATTTAATTATTCTCCAATACACTGGAGGTAATAGGTATAAAAAGAATGAGCATGTGCAACTTAGTATCTCATATCTAATTTTGTGTCCCAAGTTCATTCTTCCCCTGAATGTCCCATGTCTACCAGGTGCAGGATTATCTGGATGGGTCAGTTCAAAACAATTTCAGGGAATAAATTGTGTAGGGGACTCAATTTTCTGAGACAGAAACATAATGTGAATAACTCCTTTGTTAGAAAATAATTTCAGTGACAGAAAGCCTTTCAGTTCATAAAGAAAACTTACATATCAACAAGCCTAGCTCCTCACTAGTCCCAGTGAATGCTTACATCAATCAGCTCTACAATATCCAGTAAAGGACTTTCCAATTCGCCTTTGAATAAACTGAGGTATTGGAAACATCTAAGAAAATGGTTTTTAATTCTTCCTAATCTTCAGGGAGTTCTTCCTTATATTGAGCTGATATCTGCCCTCTGTAACTTTCAACTAATTATTCAAATCTCTCAAGTGATTATAATTAATTCCATCTTATAAGGAATTTTTCTCAGCTTCCAGCCTCTTGAAAATACTCTGATATTTTCTCTAATATTCAAGTGGAAATGTAAATGGGTAACGTAAGAGTCTGTGGGGTTAGGAGGGTGGAGGAAAGGTAAGGGAAAGCTAATGAGAAATAACCAAAGCAAGAAAAAGAATTTTATTTTCTTCAAGTTCTTTGTACATCCAAAGTGGAAGATTCCTAAAATAAATTCCCCATACCACATTTTAAAAATTAGGTTAGCAAGCTTACTTTTTAATTTATTTAGAAGCCAACTACTTCCATTTATTATTTCTTTCCAGAATAGAACAATTATCACTAATTGTTTGTCATTATAATGCCAAACTATGTTAATAGATGCCTATTTTTTTAAAGGCTAATTGCAATCATGAAACCAAATATCTAATTAGTTTTAGAGCTTTGGACCACATGCATCAATATTTGAATCATTCAGGTGTATATTTGCTTTCTGCTTTTTTGTCTCTTCAAAAGAAGTATTATATGCATTCTGTTTATAATTTCTAAATGGTCATTTCAAAACTGATTATACGAGTTTATACAAATCATACTGAAATTTGTTGCTTAAAAAATCTTCATTTTTCTCTAAGCTCTCAGTGTCCTTGAGCTATATATATTTTATGGCAATTTTTACTTAATAGTTTGTATGCTAGTTATTTTTGACAATGACTACTAAAATGCAAGTTTCTTCAAGGGCAGATTCACCTTAGTTCTTCTTTATACCCCTCAAAAACCTCAGGGTTATTCTCAATAAGTATTGAGTAGGTGAGTGAACTTTGGATGTATACTCCTTGAAATTATATTTCTGGAGCTGGAAAACTTTAAAAAAATGTATGTCATGAGTCTAAAGAAATAAACATTATATGGCTGAAAAAATACTTTGTGAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:ENSG00000244227.1]][[Category:lnc-SERPINI1-4]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 16:24, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
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Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000481578.1 |
| Source |
Gencode19 |
| Same with |
lnc-SERPINI1-4:1 |
| Classification |
intergenic |
| Length |
2350 nt |
| Genomic location |
chr3+:167613736..167641799 |
| Exon number |
7 |
| Exons |
167613736..167613872,167621094..167621238,167623651..167623740,167630574..167630692,167632849..167632991,167639732..167639824,167640177..167641799 |
| Genome context |
|
| Sequence |
000001 AGACCCCCAA AAGAGGCTGC AGATTCTTAG TGGACAGCTC TCATATCCCC TCCAGGGAAA ATGATGAAAA ATGTCTTCAG 000080 000081 AAAAATAGCT TTATGAAGGC AAGAGGACTT TTTGCACCTG CAAGACATGT CTGAAAGCTC CTCAGGTCAA AACACAAGTA 000160 000161 GTCAAGAGAT TTGTCCATCT AATTCATCAT ACTACTCTGA TCCAAGTGAG ACCCACACTG GGTCAGCTCC ATCAAGGAGA 000240 000241 AGAACATTCC ACCCACGTTT GGATTCTGGA ATATCATCCT TGCTTCCATC AGATTCTTGT AAGTACCTCA CTTGGCACAA 000320 000321 GGTAGACATG ACGTTCAAGG AAGTCAACTG CGTTGCCCAA GAGTAAGAGA AGGAATCTCT GAAGAAGAGC AACTTTTCAG 000400 000401 ACAGGTAGAG TGTGCCTTGC TCCCAAGGAA AAGAGTTCTT GAAAAAAACA AATGGGAAAC ATGGCTACAA GAAAACTGGG 000480 000481 AAGACTGCAA GAATTTGAAC ATTTCATTTC AGGGTTTGGG GGATCCTTAC CAAGTTGAAA ATTTTAACAG AATTCTTAGA 000560 000561 AGACTAATTC GAGTTGAAAC CCTCTGGTTA GTGGATAATT CACTGGTGGA CTTAAGTGCC ATAAGATTGC CAAGGCAAAA 000640 000641 ACATGCTAAC TGACAAGAAA ATCATGGGTT TTATACAAGG ATAACAAGTG CTGGGTTGCT TAGCTATGAG GAAGGCTAGG 000720 000721 CTCACTGCAT ACCAGAAGAT GTACAGCGTT GGAGAATTCA GGGATTTTTA TCAACAATCA AACTATATTT GTGGAAATTT 000800 000801 TGTGCATAAG TGCCAAAGAT GGCTGACATC GGACCACATT CTATTTAACT CAACTGAATG ACACCAAGCT CTCATCCTAA 000880 000881 AACTTATAGT TACATCCACC CTTCTGAAAT ATTTAATTAT TCTCCAATAC ACTGGAGGTA ATAGGTATAA AAAGAATGAG 000960 000961 CATGTGCAAC TTAGTATCTC ATATCTAATT TTGTGTCCCA AGTTCATTCT TCCCCTGAAT GTCCCATGTC TACCAGGTGC 001040 001041 AGGATTATCT GGATGGGTCA GTTCAAAACA ATTTCAGGGA ATAAATTGTG TAGGGGACTC AATTTTCTGA GACAGAAACA 001120 001121 TAATGTGAAT AACTCCTTTG TTAGAAAATA ATTTCAGTGA CAGAAAGCCT TTCAGTTCAT AAAGAAAACT TACATATCAA 001200 001201 CAAGCCTAGC TCCTCACTAG TCCCAGTGAA TGCTTACATC AATCAGCTCT ACAATATCCA GTAAAGGACT TTCCAATTCG 001280 001281 CCTTTGAATA AACTGAGGTA TTGGAAACAT CTAAGAAAAT GGTTTTTAAT TCTTCCTAAT CTTCAGGGAG TTCTTCCTTA 001360 001361 TATTGAGCTG ATATCTGCCC TCTGTAACTT TCAACTAATT ATTCAAATCT CTCAAGTGAT TATAATTAAT TCCATCTTAT 001440 001441 AAGGAATTTT TCTCAGCTTC CAGCCTCTTG AAAATACTCT GATATTTTCT CTAATATTCA AGTGGAAATG TAAATGGGTA 001520 001521 ACGTAAGAGT CTGTGGGGTT AGGAGGGTGG AGGAAAGGTA AGGGAAAGCT AATGAGAAAT AACCAAAGCA AGAAAAAGAA 001600 001601 TTTTATTTTC TTCAAGTTCT TTGTACATCC AAAGTGGAAG ATTCCTAAAA TAAATTCCCC ATACCACATT TTAAAAATTA 001680 001681 GGTTAGCAAG CTTACTTTTT AATTTATTTA GAAGCCAACT ACTTCCATTT ATTATTTCTT TCCAGAATAG AACAATTATC 001760 001761 ACTAATTGTT TGTCATTATA ATGCCAAACT ATGTTAATAG ATGCCTATTT TTTTAAAGGC TAATTGCAAT CATGAAACCA 001840 001841 AATATCTAAT TAGTTTTAGA GCTTTGGACC ACATGCATCA ATATTTGAAT CATTCAGGTG TATATTTGCT TTCTGCTTTT 001920 001921 TTGTCTCTTC AAAAGAAGTA TTATATGCAT TCTGTTTATA ATTTCTAAAT GGTCATTTCA AA |