Difference between revisions of "ENST00000508534.1"
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sequence = <dnaseq>GGATAATGCAAGTGTTTAACAGATGCTTCACTATTAAAATATTTTCCCCCCAAGTCTCAAATATTGAAGAATCTCTAACCAGGTACAGTATCACTCTGCTCTCTTTTCTGGTTGAAAAGAAAGAAAGAAAGAAAACGCAGGTATTGCTTTTCGAAGTGCTTTGTAGGTAATCGAGGGACACCAGTCCCTACGAAGACCTTGGGCGATTTTGAAGTGCGGGCACCTCGATTCCCCGAATCTGTAGTGTGGCTGGTATCGGTGTTCCCCTGGTTTAACTAGCCTGTTTGAAGGCACAGATCATTCATGGGGATGTATAACCGAAACCAGTCCTCTCCACCGCCTGGGGATCTTCACTTTCGCAGTCTACGACTGCCTGTGACTCCAGAAAGACAAACTGCAGATTGGCCAAGAAAGAATAAAGCACCTAGCCCTTTGGATGGACTCCTGCAGGCGTGTGGCTGTCCCTGGCCCACTTTTAATTCTTTGGAGATGGCTCTTCTGTGTAAATCAGCTGCTGGGTGCGTTCGGTCACCTCGTAGGCCAGCCTAGTTTGTATCAGCAGAACAGTAGTGGACTCGACTCAGGTCGTAAGCCTTATATTTCACAGACAATTAAATCTTGGCTGCTGTTGAACAAAACTGTAATATTTACTTTGTTCTATACCGAGAAGCACTTTTAAAGTAAAAAAGAAAAAAAAACCAAATACTACACTTCAAAAAGAAAATATGACAATGAATCTCTTTTTATGGATTCTCTCTGCATAAGTGGAAACAATATGATTTAAATCCCCAACACCCCATCCCCCTTTTCAGACACAGCTGAAGTGATACAGATACTGTCTTCTAACACATAATCTCCCTCTCTCGGGAGAGGCACCTGCCTGTGCTACATTCGATTTAGTTTGTAAGGTTTCAGGCCCCTCCCCGACCCATGTAATATGTAACAAGGATTATCAAATAATAAGGTCTTGGATGTGAAGTCTGCTTTACACAAGAATTCAAGAAAGATAGGCAGGACTTGAGTAATTATGTTACAACTTCATATTACTTTCCAAATGAATACCCATTTTCTTCTCATGTCAACTTCTAGAGATGGGATGCTGAGGCAGAGAAATATTTTTATGAGACTCTGGAGTACATACTAAAATGTGCTTCCTTATTATTTAAGAATGTGTAAGGTATGGACCTACATTTGTTTGCTGGTGGTCATAAAATAAATTCATAGCCATTGTGGCCAATAAGCAATCTCCTTCACGCTTTAAAAGTTTTTGGTTTATAATCCCACCTGGATTGTATTTTCACTATTCTGTATCACCCTCCTATTGCAATATTTTGGTTCTCAATCTTATGTAAAGCAAACCTCAGAAATGATCGTTTCCATAAAATTGTGCAATGGCAAAGCCACAGAATAATATTTTGAGTCCATATAGCCGTGCATGCTCATCTATATAGCTCTTATACAGTTTTCTAGCTGATTGCTTTGGTATTTCAAGAAATAGGAAGCAGTAGCTACCTATTTTAATGAAAGGGTACCATTTCATAAGAATTCTATTTTCACTGAAAAAATTGGTCTGGCACATTATTCAATGCAAAAGATTATAATATTACTTTCACGTGTGTTAATCTGTTTAGTATAAAACTGCTAGGGTGTCTTAACCATTAACGCGTTTTGCCACACTACTTTCAAATGGTGATCTGAGATAATTACGAAGATTTTGATGTTAATCCCACGTTAAATGAACAACTATGAAAATAATCTTAAAGCATTATTACTCCCATATACATGCCAGCAAACCCAATTGTGGAGAGAACATGATTACTTTTTATCTGACATTATCCTATAAGGATATGGCTACATTTATTTCTTTTAAAATTGGAGCAGTTTTCAATTACTTTTTAACAGAATTGTTTTCAACACAGCATTTTGCAGTGCCCATAAACCATAGCAACTTTGTCCTGATCGATACATATTTTTCTGCATTATTATTCATTAGCCTCTTTGCAAACTCACTAAAATAGAATAGTATTAAAGTATGAATATATAGAGAACAATTATTAGGTTCTACATATTTATTTAGGTAAACCAATGTTATTAAAATTAAAAACATGTGCCTGGCATATAAGTGCTTCTTCAGGAATTCTTTTTTGGATGCATAGTTATTATTTTTTAAACAAACTCAGATTTTCAAACACTGATTTTCTTCTCTGAACGGGCATTGCATTGTTTTAAACAGTAGCTCCTGGAATAATGCCACCTTTAGTATTTTAGACTTTCAAACAACAATTGGAATTGGATAAATGCTTTCAGCTGGGAGCACTTTCCTAATACCTTTGTAGGTAATGGGATTCTCTATTTGTGCTGGGTGACAAACGGACAGTGCCCTGGACAGACTGCCTACCCTCTGCAGAATCTACCAAAAAGTAGAGTTTTCCCATGAGACTGCTTGTGGTCCATCTAAAAATGAAAAAATAATCAGAGAAAATGCGCAAAGCCTTTTCTAACTACAGTTATGAAATGATGGCTTAAAGAGGTATTTAGAAAATAAGAGTGGAGTAATACAGAAACAAAATCTGAAGAAGAAAGTTTGCTTAGGAGCTGATGCTCTTTGTCTACAAACAAGAGGGTAAGGAGCTGGATCCAATTGAATTGAATTGTTTTTGTTTGCTTGTTTGTTTTCTTCCATTCAGTGCCTTTCAAACTGTTTTTTACTGGATGAAGAAACTCAACCAAGAAAATATATGTCGATTCTTGTATATGGGACAATATTAGCTGCTGTGATTTTTAATACTAGCATAAAATATAAGAATCTTTTTATTACTGTGATATTGTTTTTTCCTAAATGAATGCATAGTGTAACAATTGGTGTCAAAAAGCATTGAATTTTTTTCAGATGGATTAAGCTGGAATAATAAAGTATATCTATGAGATGATTTCTGTAAACTCTGACTTGCTGAGAAAAAAGTGAAAAAGCTTTTTCTGGAAGAAACATGGCAACTTAACCGTTATTAATCTGGACTAAATAAAACAGGAAACTGCTTCTTTACATTTCTAGTAATTTTTTCTGCTTTTCCAAACATTGTTAAGTTCTATGCAACTTGTGCTATTCAAGTAAAGATGATGTCAGTAATAAAATTACAGAATCTA</dnaseq>| | sequence = <dnaseq>GGATAATGCAAGTGTTTAACAGATGCTTCACTATTAAAATATTTTCCCCCCAAGTCTCAAATATTGAAGAATCTCTAACCAGGTACAGTATCACTCTGCTCTCTTTTCTGGTTGAAAAGAAAGAAAGAAAGAAAACGCAGGTATTGCTTTTCGAAGTGCTTTGTAGGTAATCGAGGGACACCAGTCCCTACGAAGACCTTGGGCGATTTTGAAGTGCGGGCACCTCGATTCCCCGAATCTGTAGTGTGGCTGGTATCGGTGTTCCCCTGGTTTAACTAGCCTGTTTGAAGGCACAGATCATTCATGGGGATGTATAACCGAAACCAGTCCTCTCCACCGCCTGGGGATCTTCACTTTCGCAGTCTACGACTGCCTGTGACTCCAGAAAGACAAACTGCAGATTGGCCAAGAAAGAATAAAGCACCTAGCCCTTTGGATGGACTCCTGCAGGCGTGTGGCTGTCCCTGGCCCACTTTTAATTCTTTGGAGATGGCTCTTCTGTGTAAATCAGCTGCTGGGTGCGTTCGGTCACCTCGTAGGCCAGCCTAGTTTGTATCAGCAGAACAGTAGTGGACTCGACTCAGGTCGTAAGCCTTATATTTCACAGACAATTAAATCTTGGCTGCTGTTGAACAAAACTGTAATATTTACTTTGTTCTATACCGAGAAGCACTTTTAAAGTAAAAAAGAAAAAAAAACCAAATACTACACTTCAAAAAGAAAATATGACAATGAATCTCTTTTTATGGATTCTCTCTGCATAAGTGGAAACAATATGATTTAAATCCCCAACACCCCATCCCCCTTTTCAGACACAGCTGAAGTGATACAGATACTGTCTTCTAACACATAATCTCCCTCTCTCGGGAGAGGCACCTGCCTGTGCTACATTCGATTTAGTTTGTAAGGTTTCAGGCCCCTCCCCGACCCATGTAATATGTAACAAGGATTATCAAATAATAAGGTCTTGGATGTGAAGTCTGCTTTACACAAGAATTCAAGAAAGATAGGCAGGACTTGAGTAATTATGTTACAACTTCATATTACTTTCCAAATGAATACCCATTTTCTTCTCATGTCAACTTCTAGAGATGGGATGCTGAGGCAGAGAAATATTTTTATGAGACTCTGGAGTACATACTAAAATGTGCTTCCTTATTATTTAAGAATGTGTAAGGTATGGACCTACATTTGTTTGCTGGTGGTCATAAAATAAATTCATAGCCATTGTGGCCAATAAGCAATCTCCTTCACGCTTTAAAAGTTTTTGGTTTATAATCCCACCTGGATTGTATTTTCACTATTCTGTATCACCCTCCTATTGCAATATTTTGGTTCTCAATCTTATGTAAAGCAAACCTCAGAAATGATCGTTTCCATAAAATTGTGCAATGGCAAAGCCACAGAATAATATTTTGAGTCCATATAGCCGTGCATGCTCATCTATATAGCTCTTATACAGTTTTCTAGCTGATTGCTTTGGTATTTCAAGAAATAGGAAGCAGTAGCTACCTATTTTAATGAAAGGGTACCATTTCATAAGAATTCTATTTTCACTGAAAAAATTGGTCTGGCACATTATTCAATGCAAAAGATTATAATATTACTTTCACGTGTGTTAATCTGTTTAGTATAAAACTGCTAGGGTGTCTTAACCATTAACGCGTTTTGCCACACTACTTTCAAATGGTGATCTGAGATAATTACGAAGATTTTGATGTTAATCCCACGTTAAATGAACAACTATGAAAATAATCTTAAAGCATTATTACTCCCATATACATGCCAGCAAACCCAATTGTGGAGAGAACATGATTACTTTTTATCTGACATTATCCTATAAGGATATGGCTACATTTATTTCTTTTAAAATTGGAGCAGTTTTCAATTACTTTTTAACAGAATTGTTTTCAACACAGCATTTTGCAGTGCCCATAAACCATAGCAACTTTGTCCTGATCGATACATATTTTTCTGCATTATTATTCATTAGCCTCTTTGCAAACTCACTAAAATAGAATAGTATTAAAGTATGAATATATAGAGAACAATTATTAGGTTCTACATATTTATTTAGGTAAACCAATGTTATTAAAATTAAAAACATGTGCCTGGCATATAAGTGCTTCTTCAGGAATTCTTTTTTGGATGCATAGTTATTATTTTTTAAACAAACTCAGATTTTCAAACACTGATTTTCTTCTCTGAACGGGCATTGCATTGTTTTAAACAGTAGCTCCTGGAATAATGCCACCTTTAGTATTTTAGACTTTCAAACAACAATTGGAATTGGATAAATGCTTTCAGCTGGGAGCACTTTCCTAATACCTTTGTAGGTAATGGGATTCTCTATTTGTGCTGGGTGACAAACGGACAGTGCCCTGGACAGACTGCCTACCCTCTGCAGAATCTACCAAAAAGTAGAGTTTTCCCATGAGACTGCTTGTGGTCCATCTAAAAATGAAAAAATAATCAGAGAAAATGCGCAAAGCCTTTTCTAACTACAGTTATGAAATGATGGCTTAAAGAGGTATTTAGAAAATAAGAGTGGAGTAATACAGAAACAAAATCTGAAGAAGAAAGTTTGCTTAGGAGCTGATGCTCTTTGTCTACAAACAAGAGGGTAAGGAGCTGGATCCAATTGAATTGAATTGTTTTTGTTTGCTTGTTTGTTTTCTTCCATTCAGTGCCTTTCAAACTGTTTTTTACTGGATGAAGAAACTCAACCAAGAAAATATATGTCGATTCTTGTATATGGGACAATATTAGCTGCTGTGATTTTTAATACTAGCATAAAATATAAGAATCTTTTTATTACTGTGATATTGTTTTTTCCTAAATGAATGCATAGTGTAACAATTGGTGTCAAAAAGCATTGAATTTTTTTCAGATGGATTAAGCTGGAATAATAAAGTATATCTATGAGATGATTTCTGTAAACTCTGACTTGCTGAGAAAAAAGTGAAAAAGCTTTTTCTGGAAGAAACATGGCAACTTAACCGTTATTAATCTGGACTAAATAAAACAGGAAACTGCTTCTTTACATTTCTAGTAATTTTTTCTGCTTTTCCAAACATTGTTAAGTTCTATGCAACTTGTGCTATTCAAGTAAAGATGATGTCAGTAATAAAATTACAGAATCTA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-SAP30-5]] | + | [[Category:Intergenic]][[Category:lnc-SAP30-5]][[Category:NONHSAG039361]][[Category:ENSG00000237125.4]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 16:41, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000508534.1 |
Source |
Gencode19 |
Same with |
lnc-SAP30-5:17,NONHSAT099274 |
Classification |
intergenic |
Length |
3144 nt |
Genomic location |
chr4+:174451609..174463082 |
Exon number |
4 |
Exons |
174451609..174451783,174452118..174452229,174457999..174458121,174460349..174463082 |
Genome context |
|
Sequence |
000001 GGATAATGCA AGTGTTTAAC AGATGCTTCA CTATTAAAAT ATTTTCCCCC CAAGTCTCAA ATATTGAAGA ATCTCTAACC 000080 000081 AGGTACAGTA TCACTCTGCT CTCTTTTCTG GTTGAAAAGA AAGAAAGAAA GAAAACGCAG GTATTGCTTT TCGAAGTGCT 000160 000161 TTGTAGGTAA TCGAGGGACA CCAGTCCCTA CGAAGACCTT GGGCGATTTT GAAGTGCGGG CACCTCGATT CCCCGAATCT 000240 000241 GTAGTGTGGC TGGTATCGGT GTTCCCCTGG TTTAACTAGC CTGTTTGAAG GCACAGATCA TTCATGGGGA TGTATAACCG 000320 000321 AAACCAGTCC TCTCCACCGC CTGGGGATCT TCACTTTCGC AGTCTACGAC TGCCTGTGAC TCCAGAAAGA CAAACTGCAG 000400 000401 ATTGGCCAAG AAAGAATAAA GCACCTAGCC CTTTGGATGG ACTCCTGCAG GCGTGTGGCT GTCCCTGGCC CACTTTTAAT 000480 000481 TCTTTGGAGA TGGCTCTTCT GTGTAAATCA GCTGCTGGGT GCGTTCGGTC ACCTCGTAGG CCAGCCTAGT TTGTATCAGC 000560 000561 AGAACAGTAG TGGACTCGAC TCAGGTCGTA AGCCTTATAT TTCACAGACA ATTAAATCTT GGCTGCTGTT GAACAAAACT 000640 000641 GTAATATTTA CTTTGTTCTA TACCGAGAAG CACTTTTAAA GTAAAAAAGA AAAAAAAACC AAATACTACA CTTCAAAAAG 000720 000721 AAAATATGAC AATGAATCTC TTTTTATGGA TTCTCTCTGC ATAAGTGGAA ACAATATGAT TTAAATCCCC AACACCCCAT 000800 000801 CCCCCTTTTC AGACACAGCT GAAGTGATAC AGATACTGTC TTCTAACACA TAATCTCCCT CTCTCGGGAG AGGCACCTGC 000880 000881 CTGTGCTACA TTCGATTTAG TTTGTAAGGT TTCAGGCCCC TCCCCGACCC ATGTAATATG TAACAAGGAT TATCAAATAA 000960 000961 TAAGGTCTTG GATGTGAAGT CTGCTTTACA CAAGAATTCA AGAAAGATAG GCAGGACTTG AGTAATTATG TTACAACTTC 001040 001041 ATATTACTTT CCAAATGAAT ACCCATTTTC TTCTCATGTC AACTTCTAGA GATGGGATGC TGAGGCAGAG AAATATTTTT 001120 001121 ATGAGACTCT GGAGTACATA CTAAAATGTG CTTCCTTATT ATTTAAGAAT GTGTAAGGTA TGGACCTACA TTTGTTTGCT 001200 001201 GGTGGTCATA AAATAAATTC ATAGCCATTG TGGCCAATAA GCAATCTCCT TCACGCTTTA AAAGTTTTTG GTTTATAATC 001280 001281 CCACCTGGAT TGTATTTTCA CTATTCTGTA TCACCCTCCT ATTGCAATAT TTTGGTTCTC AATCTTATGT AAAGCAAACC 001360 001361 TCAGAAATGA TCGTTTCCAT AAAATTGTGC AATGGCAAAG CCACAGAATA ATATTTTGAG TCCATATAGC CGTGCATGCT 001440 001441 CATCTATATA GCTCTTATAC AGTTTTCTAG CTGATTGCTT TGGTATTTCA AGAAATAGGA AGCAGTAGCT ACCTATTTTA 001520 001521 ATGAAAGGGT ACCATTTCAT AAGAATTCTA TTTTCACTGA AAAAATTGGT CTGGCACATT ATTCAATGCA AAAGATTATA 001600 001601 ATATTACTTT CACGTGTGTT AATCTGTTTA GTATAAAACT GCTAGGGTGT CTTAACCATT AACGCGTTTT GCCACACTAC 001680 001681 TTTCAAATGG TGATCTGAGA TAATTACGAA GATTTTGATG TTAATCCCAC GTTAAATGAA CAACTATGAA AATAATCTTA 001760 001761 AAGCATTATT ACTCCCATAT ACATGCCAGC AAACCCAATT GTGGAGAGAA CATGATTACT TTTTATCTGA CATTATCCTA 001840 001841 TAAGGATATG GCTACATTTA TTTCTTTTAA AATTGGAGCA GTTTTCAATT ACTTTTTAAC AGAATTGTTT TCAACACAGC 001920 001921 ATTTTGCAGT GCCCATAAAC < |