Difference between revisions of "ENST00000519570.1"

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sequence = <dnaseq>CAGAGGCTGTGGGAGCAGCATCAAGCAAGACTTCGGGCAGTGATTCTAACTATTGCCTATGAACACCGTGGCTGGGACGACTTTGACGAGGCAATTTATTACTTACGCATAGAACACTGGCTGTGCTGAAACTGGGAGCGCAAACAGCCCCTTGTTTTCTAATTTAGAGACTTGCATCTTTTCGACACTCAACAGTATCAAGACACTCTGCTACTACAGATTGATTTCCACCATCAACACCTTTACCTCTTCCCGCCTGAAAATAAAATATGAAATATAACAAGTAAATCGCAATCTACCTTGGGAAATCATCTTTCGGGAATTTATCTAAGAAGAACTTCTTATGTGAACTCCTGTGCTTAAGCAATCTTCCTGCCTTGGCCTCCCAAAGTTCTGAGATTATATGGATATATGAAGTCTGGGGGTAAGACCTGCAGTAATTTCCCTTAAGATACTACAGAATTTCCAAGGACTTGAGGAATAATTGCACTCTTGAAAGAGCCTATGAAAAAAGAAGAGACTTGGGAAATTTAACAGAAGTTCACTTTCCACCACTGCGCAAACTAAGGAAAAACTTAAAGCAGTAAATAGCTGCGGTTGGCAAAGCTGTTTTGGCTCAGGAGCAGCTATCAGGCCTTGATAAGGTCCACAAGTCTGCTGTTCTAAAATCAAAAAAAAAAAAAAAAAAAACAACCCTAAATGTTGAAAGTATTTTTG</dnaseq>|
 
sequence = <dnaseq>CAGAGGCTGTGGGAGCAGCATCAAGCAAGACTTCGGGCAGTGATTCTAACTATTGCCTATGAACACCGTGGCTGGGACGACTTTGACGAGGCAATTTATTACTTACGCATAGAACACTGGCTGTGCTGAAACTGGGAGCGCAAACAGCCCCTTGTTTTCTAATTTAGAGACTTGCATCTTTTCGACACTCAACAGTATCAAGACACTCTGCTACTACAGATTGATTTCCACCATCAACACCTTTACCTCTTCCCGCCTGAAAATAAAATATGAAATATAACAAGTAAATCGCAATCTACCTTGGGAAATCATCTTTCGGGAATTTATCTAAGAAGAACTTCTTATGTGAACTCCTGTGCTTAAGCAATCTTCCTGCCTTGGCCTCCCAAAGTTCTGAGATTATATGGATATATGAAGTCTGGGGGTAAGACCTGCAGTAATTTCCCTTAAGATACTACAGAATTTCCAAGGACTTGAGGAATAATTGCACTCTTGAAAGAGCCTATGAAAAAAGAAGAGACTTGGGAAATTTAACAGAAGTTCACTTTCCACCACTGCGCAAACTAAGGAAAAACTTAAAGCAGTAAATAGCTGCGGTTGGCAAAGCTGTTTTGGCTCAGGAGCAGCTATCAGGCCTTGATAAGGTCCACAAGTCTGCTGTTCTAAAATCAAAAAAAAAAAAAAAAAAAACAACCCTAAATGTTGAAAGTATTTTTG</dnaseq>|
 
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}}
[[Category:Intergenic]][[Category:lnc-MAT2B-3]][[Category:NONHSAG042145]]
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[[Category:Intergenic]][[Category:lnc-MAT2B-3]][[Category:NONHSAG042145]][[Category:Transcripts]]

Latest revision as of 16:56, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000519570.1

Source

Gencode19

Same with

lnc-MAT2B-3:4,NONHSAT104926

Classification

intergenic

Length

717 nt

Genomic location

chr5+:163723984..164598649

Exon number

6

Exons

163723984..163724202,163781147..163781230,164149771..164149813,164347141..164347201,164434375..164434418,164598384..164598649

Genome context

Sequence
000001 CAGAGGCTGT GGGAGCAGCA TCAAGCAAGA CTTCGGGCAG TGATTCTAAC TATTGCCTAT GAACACCGTG GCTGGGACGA 000080
000081 CTTTGACGAG GCAATTTATT ACTTACGCAT AGAACACTGG CTGTGCTGAA ACTGGGAGCG CAAACAGCCC CTTGTTTTCT 000160
000161 AATTTAGAGA CTTGCATCTT TTCGACACTC AACAGTATCA AGACACTCTG CTACTACAGA TTGATTTCCA CCATCAACAC 000240
000241 CTTTACCTCT TCCCGCCTGA AAATAAAATA TGAAATATAA CAAGTAAATC GCAATCTACC TTGGGAAATC ATCTTTCGGG 000320
000321 AATTTATCTA AGAAGAACTT CTTATGTGAA CTCCTGTGCT TAAGCAATCT TCCTGCCTTG GCCTCCCAAA GTTCTGAGAT 000400
000401 TATATGGATA TATGAAGTCT GGGGGTAAGA CCTGCAGTAA TTTCCCTTAA GATACTACAG AATTTCCAAG GACTTGAGGA 000480
000481 ATAATTGCAC TCTTGAAAGA GCCTATGAAA AAAGAAGAGA CTTGGGAAAT TTAACAGAAG TTCACTTTCC ACCACTGCGC 000560
000561 AAACTAAGGA AAAACTTAAA GCAGTAAATA GCTGCGGTTG GCAAAGCTGT TTTGGCTCAG GAGCAGCTAT CAGGCCTTGA 000640
000641 TAAGGTCCAC AAGTCTGCTG TTCTAAAATC AAAAAAAAAA AAAAAAAAAA CAACCCTAAA TGTTGAAAGT ATTTTTG
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