Difference between revisions of "ENST00000540725.1"

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sequence = <dnaseq>GCTGCCTGGCCAGGGCGACTGGCGGATAAGGTCTTGTGCGTGGCCTCGAGGCTTAAAAGTAGCAGTGGGGCTTTGTGAAGGACAAAATGGCGATGGCGGGCCGTGTAGGTCCCCCTTCCTATGATGAGGACCTTTTCACAGACCTGTACTGAGCTCCGTGAGGATAAATAACTCTGAGGAGATGGGCCCTGCAAGCCTCTTGCTTAGCCGTCTGTTCAGAAAATAGCGTTTTCGAAATGCCCTGAGTTGACCTAATGTCTTATTGGGCTCCTGTCTGCAGGATTTACGCGCACGTTGGAACCGAAGAGAGCTCTGTTGTTGCAATGTTCAGCCCACAAGAGCTTACTGGTGAAGGAATGGGACAAGACCCATCTTTATGCAAAGCCAGCGTTACAGTAATGTTCCAGCATCTCATAATCTATCCTGGGGAATTCAGCTGCCTCCCAGGGTGAATACAGGTATTCCTGATGACAGTCTGCCTCTATCTTACAGAGCAGCTTGTTGCTATATACCATTGAAAAGCCTTCAGAGCTGAGAGGTACTACTAACCAATAACCTGCTTGGCTCAAAGGGCCAGCACCTTCTCTCTAAAGCCCAAGAGGAGTTTGAGGAAAACTAGGTGTCTGTGTTCACTCCAGGCTGAAGTTACAGGTCTGAGCAAATAAGGTGTATAAAAAATGGAATCTGTCTTGGAGGACATCAGAAGGTGAATTTTCCAAGTTCTTGGACAACCTAGCTGTTGAAAAGCTTTCTGGGTTTGGGGGGTATTTCAGATGTACCTTAAAGTGTTAGCAGACACAGATTAAGACACTGGGAGCCAATGAAACAGCAGTTGAGGGTTTGCTGTGTATCACATTTCTGTATTTTATCACCCCCTTCCTGCAACATTATTTATCTGGAATCTACCTGCCCTTTTGTTTTTTAGATACAAGGGCTTGGTTTTGTTACCCAGGCTGGTTTCAAGGCCATAGCTTTAAGAGATCCTCTCACCACAGATTTCCAAAGTGCTGGGATTGCAGGTGTGATTCATGGCACCCAGACTTTGCTGCCTTTCTTACATGATCCAGGCCCAGAACCCAAACTCAGGCACTGTATAGATGACCACTTTCGTAAACTACTGACCTAGCTTGTTGCCAATTGTTGATTGAACTTCCCATAACTCCACTTCGTGTCTGTTCCTCTGTATACAGCCACCTTCTGTTCCCGTCATGAGCCTTTAGGTCTCCATTTGCATATTGCAAATACTATGTTCCATGTAGGTAGCTCATTCAGGGCCTTGCTCTTCACTTCAAAAAAGGTTCCCTTGAGGACTGGCTGTCAATTTGTGTTGCTGTGTTGGTTGTTGATGAAAATAATAAAATGATTGATTACATA</dnaseq>|
 
sequence = <dnaseq>GCTGCCTGGCCAGGGCGACTGGCGGATAAGGTCTTGTGCGTGGCCTCGAGGCTTAAAAGTAGCAGTGGGGCTTTGTGAAGGACAAAATGGCGATGGCGGGCCGTGTAGGTCCCCCTTCCTATGATGAGGACCTTTTCACAGACCTGTACTGAGCTCCGTGAGGATAAATAACTCTGAGGAGATGGGCCCTGCAAGCCTCTTGCTTAGCCGTCTGTTCAGAAAATAGCGTTTTCGAAATGCCCTGAGTTGACCTAATGTCTTATTGGGCTCCTGTCTGCAGGATTTACGCGCACGTTGGAACCGAAGAGAGCTCTGTTGTTGCAATGTTCAGCCCACAAGAGCTTACTGGTGAAGGAATGGGACAAGACCCATCTTTATGCAAAGCCAGCGTTACAGTAATGTTCCAGCATCTCATAATCTATCCTGGGGAATTCAGCTGCCTCCCAGGGTGAATACAGGTATTCCTGATGACAGTCTGCCTCTATCTTACAGAGCAGCTTGTTGCTATATACCATTGAAAAGCCTTCAGAGCTGAGAGGTACTACTAACCAATAACCTGCTTGGCTCAAAGGGCCAGCACCTTCTCTCTAAAGCCCAAGAGGAGTTTGAGGAAAACTAGGTGTCTGTGTTCACTCCAGGCTGAAGTTACAGGTCTGAGCAAATAAGGTGTATAAAAAATGGAATCTGTCTTGGAGGACATCAGAAGGTGAATTTTCCAAGTTCTTGGACAACCTAGCTGTTGAAAAGCTTTCTGGGTTTGGGGGGTATTTCAGATGTACCTTAAAGTGTTAGCAGACACAGATTAAGACACTGGGAGCCAATGAAACAGCAGTTGAGGGTTTGCTGTGTATCACATTTCTGTATTTTATCACCCCCTTCCTGCAACATTATTTATCTGGAATCTACCTGCCCTTTTGTTTTTTAGATACAAGGGCTTGGTTTTGTTACCCAGGCTGGTTTCAAGGCCATAGCTTTAAGAGATCCTCTCACCACAGATTTCCAAAGTGCTGGGATTGCAGGTGTGATTCATGGCACCCAGACTTTGCTGCCTTTCTTACATGATCCAGGCCCAGAACCCAAACTCAGGCACTGTATAGATGACCACTTTCGTAAACTACTGACCTAGCTTGTTGCCAATTGTTGATTGAACTTCCCATAACTCCACTTCGTGTCTGTTCCTCTGTATACAGCCACCTTCTGTTCCCGTCATGAGCCTTTAGGTCTCCATTTGCATATTGCAAATACTATGTTCCATGTAGGTAGCTCATTCAGGGCCTTGCTCTTCACTTCAAAAAAGGTTCCCTTGAGGACTGGCTGTCAATTTGTGTTGCTGTGTTGGTTGTTGATGAAAATAATAAAATGATTGATTACATA</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-WDR74-1]]
+
[[Category:Intergenic]][[Category:lnc-WDR74-1]][[Category:NONHSAG008552]][[Category:ENSG00000255717.2]][[Category:Transcripts]]

Latest revision as of 17:22, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000540725.1

Source

Gencode19

Same with

lnc-WDR74-1:7,NONHSAT021827

Classification

intergenic

Length

1374 nt

Genomic location

chr11-:62619460..62623218

Exon number

10

Exons

62619460..62620153,62620283..62620311,62620547..62620587,62621024..62621062,62621273..62621305,62621490..62621536,62621991..62622023,62622360..62622410,62622605..62622688,62622896..62623218

Genome context

Sequence
000001 GCTGCCTGGC CAGGGCGACT GGCGGATAAG GTCTTGTGCG TGGCCTCGAG GCTTAAAAGT AGCAGTGGGG CTTTGTGAAG 000080
000081 GACAAAATGG CGATGGCGGG CCGTGTAGGT CCCCCTTCCT ATGATGAGGA CCTTTTCACA GACCTGTACT GAGCTCCGTG 000160
000161 AGGATAAATA ACTCTGAGGA GATGGGCCCT GCAAGCCTCT TGCTTAGCCG TCTGTTCAGA AAATAGCGTT TTCGAAATGC 000240
000241 CCTGAGTTGA CCTAATGTCT TATTGGGCTC CTGTCTGCAG GATTTACGCG CACGTTGGAA CCGAAGAGAG CTCTGTTGTT 000320
000321 GCAATGTTCA GCCCACAAGA GCTTACTGGT GAAGGAATGG GACAAGACCC ATCTTTATGC AAAGCCAGCG TTACAGTAAT 000400
000401 GTTCCAGCAT CTCATAATCT ATCCTGGGGA ATTCAGCTGC CTCCCAGGGT GAATACAGGT ATTCCTGATG ACAGTCTGCC 000480
000481 TCTATCTTAC AGAGCAGCTT GTTGCTATAT ACCATTGAAA AGCCTTCAGA GCTGAGAGGT ACTACTAACC AATAACCTGC 000560
000561 TTGGCTCAAA GGGCCAGCAC CTTCTCTCTA AAGCCCAAGA GGAGTTTGAG GAAAACTAGG TGTCTGTGTT CACTCCAGGC 000640
000641 TGAAGTTACA GGTCTGAGCA AATAAGGTGT ATAAAAAATG GAATCTGTCT TGGAGGACAT CAGAAGGTGA ATTTTCCAAG 000720
000721 TTCTTGGACA ACCTAGCTGT TGAAAAGCTT TCTGGGTTTG GGGGGTATTT CAGATGTACC TTAAAGTGTT AGCAGACACA 000800
000801 GATTAAGACA CTGGGAGCCA ATGAAACAGC AGTTGAGGGT TTGCTGTGTA TCACATTTCT GTATTTTATC ACCCCCTTCC 000880
000881 TGCAACATTA TTTATCTGGA ATCTACCTGC CCTTTTGTTT TTTAGATACA AGGGCTTGGT TTTGTTACCC AGGCTGGTTT 000960
000961 CAAGGCCATA GCTTTAAGAG ATCCTCTCAC CACAGATTTC CAAAGTGCTG GGATTGCAGG TGTGATTCAT GGCACCCAGA 001040
001041 CTTTGCTGCC TTTCTTACAT GATCCAGGCC CAGAACCCAA ACTCAGGCAC TGTATAGATG ACCACTTTCG TAAACTACTG 001120
001121 ACCTAGCTTG TTGCCAATTG TTGATTGAAC TTCCCATAAC TCCACTTCGT GTCTGTTCCT CTGTATACAG CCACCTTCTG 001200
001201 TTCCCGTCAT GAGCCTTTAG GTCTCCATTT GCATATTGCA AATACTATGT TCCATGTAGG TAGCTCATTC AGGGCCTTGC 001280
001281 TCTTCACTTC AAAAAAGGTT CCCTTGAGGA CTGGCTGTCA ATTTGTGTTG CTGTGTTGGT TGTTGATGAA AATAATAAAA 001360
001361 TGATTGATTA CATA
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