Difference between revisions of "ENST00000540882.1"
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sequence = <dnaseq>AGAAAAACAGGGACATCAACCAGCAAAGATGCATCCTCATTTAATAGAGCTTGAAATTACTATAATCTGTAAAGTACAGCGAGAAGAAGAAGTTTCACCTGCCTGCACATCTGTCGTTGACTCTCCATCTGACTTGGAGGGACTCTGAGGGACCAACCTGAGCCTGAGAAGAGGCAAGATTCCCCTTCAAGGACACACTGGGAACTTACGGACCTCTTTCTCCATGGTGCAGAGCGCAGAGGTGAACAAACAGACGCATAATAGCTCTTGAGCTTGCCATTGGGAAGTGAAAATCAACTGCTTGAATAAATGTAAGGACTCAGAACACCAGACATGGGTGCTCCAATCCACGTAGTGTTGAGGCAGTGAAGTTTGTGTTCCAGGAACTTCAGAACTCCTGAATGTATTGGTGTTGATAAAAGGTGATGAGATGAAGTAGAATGACCATAAACTTAGAGGTAGACATCACCTTGTGACTCAACAGCAGCCAATAAGATGGAAATAAAGGCCATGAAGTTATCGGATGGCATCTACAAGGAATACTTAGATGAGGAGGTGACTCTGGTAGCAATTGTTCTTTTGTCTTTCTCACCTTCCTTCTTGTCCTGTCTGGGATGCTGAAGTGATGGCTGGTATACAGATGCCCTGTTGTGATGTTGAGATAAACATGAGAATAAAAGTCGGCGATTACAGATGGCAGAGAAGAGAGAGAAAGATAGGATGTAGGTGGATATTGACGGAACTAAGTTTCTATTGCACAAGTTCTACCACCAACCTCTGGACTTCATGATATGTGAGGGAGAAATAAACTCCTATTTTAGAAGAGATCTATGTTACCTGCAACTGAACGGAATGCTTAATTGGCACATCCTATGTGCTCCAAACCTTCCTTAATTTCTGTGTGTAAGGCATACTTAGTCTTTACCCATTATTCTGTTCACATTCATTCACTTGATCAGCCTCCCAACTCTATGGTAAAGAGTTTACTACAGTTTACTCTATTAGTAAGGGAGATTCTGGAGCAAGCCCCACAAATCATAGATTGAATACCCATTCATTAAGAGAGAGATTTAAAGATACTTCTATCCAAACACATTTTAAATTTCCAGCACCTTTGAGGTGGTGGAGGTTCATGGTGGTTGATAGGGTTTAAATGACTTGTGATTCAAGCTCCATATTACAATGTAACAGTGCAAAAGTTCATTTTTTTAAATTTATTTTACTTTAAGTTCTGGTATACATGTGTAGAACATGCGGGTTTGTTACATAGGTATACATGTGCCATGGTGGTTTGCTGCACCTATCAAACCGTCACCTAGGTTTTAAGAACCACATGCATTAGGTATTTGACCTAATGCTCTCCCTCATGTTGCCCCCCAACTCCCTGACAGGGCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTTGATTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACACGAACTCATTCTTTTTTATGGCTTCATAATATTCCATGAGTCTGGATTTGGTTACAGATAGAGCTGGACAAGCCTTAGCTATATCTAATGGCTTTTGACATGTTATATCAATTTCTTACTGCTTTTGTAAATGAATATATTAAGAAGAAAAAATTACAAATGACCCTTTCTTCACAAACTTTTAGGGTAATCAAGTTCAGTTATTAAAAAATGGATGTTTGCAACATTCATAGTAATTATTTTCAGAAAATTAAAAATGATTAAAAATTATATTTTCATCCCATTCAGATATTATATATTTAACTGTGAGATAATTCTCAGAGATAAATGTCAACTTTTAAAAAATGCTAAATAAATTAAATCAAAATATCCCCTCTAAAATAAATAAA</dnaseq>| | sequence = <dnaseq>AGAAAAACAGGGACATCAACCAGCAAAGATGCATCCTCATTTAATAGAGCTTGAAATTACTATAATCTGTAAAGTACAGCGAGAAGAAGAAGTTTCACCTGCCTGCACATCTGTCGTTGACTCTCCATCTGACTTGGAGGGACTCTGAGGGACCAACCTGAGCCTGAGAAGAGGCAAGATTCCCCTTCAAGGACACACTGGGAACTTACGGACCTCTTTCTCCATGGTGCAGAGCGCAGAGGTGAACAAACAGACGCATAATAGCTCTTGAGCTTGCCATTGGGAAGTGAAAATCAACTGCTTGAATAAATGTAAGGACTCAGAACACCAGACATGGGTGCTCCAATCCACGTAGTGTTGAGGCAGTGAAGTTTGTGTTCCAGGAACTTCAGAACTCCTGAATGTATTGGTGTTGATAAAAGGTGATGAGATGAAGTAGAATGACCATAAACTTAGAGGTAGACATCACCTTGTGACTCAACAGCAGCCAATAAGATGGAAATAAAGGCCATGAAGTTATCGGATGGCATCTACAAGGAATACTTAGATGAGGAGGTGACTCTGGTAGCAATTGTTCTTTTGTCTTTCTCACCTTCCTTCTTGTCCTGTCTGGGATGCTGAAGTGATGGCTGGTATACAGATGCCCTGTTGTGATGTTGAGATAAACATGAGAATAAAAGTCGGCGATTACAGATGGCAGAGAAGAGAGAGAAAGATAGGATGTAGGTGGATATTGACGGAACTAAGTTTCTATTGCACAAGTTCTACCACCAACCTCTGGACTTCATGATATGTGAGGGAGAAATAAACTCCTATTTTAGAAGAGATCTATGTTACCTGCAACTGAACGGAATGCTTAATTGGCACATCCTATGTGCTCCAAACCTTCCTTAATTTCTGTGTGTAAGGCATACTTAGTCTTTACCCATTATTCTGTTCACATTCATTCACTTGATCAGCCTCCCAACTCTATGGTAAAGAGTTTACTACAGTTTACTCTATTAGTAAGGGAGATTCTGGAGCAAGCCCCACAAATCATAGATTGAATACCCATTCATTAAGAGAGAGATTTAAAGATACTTCTATCCAAACACATTTTAAATTTCCAGCACCTTTGAGGTGGTGGAGGTTCATGGTGGTTGATAGGGTTTAAATGACTTGTGATTCAAGCTCCATATTACAATGTAACAGTGCAAAAGTTCATTTTTTTAAATTTATTTTACTTTAAGTTCTGGTATACATGTGTAGAACATGCGGGTTTGTTACATAGGTATACATGTGCCATGGTGGTTTGCTGCACCTATCAAACCGTCACCTAGGTTTTAAGAACCACATGCATTAGGTATTTGACCTAATGCTCTCCCTCATGTTGCCCCCCAACTCCCTGACAGGGCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTTGATTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACACGAACTCATTCTTTTTTATGGCTTCATAATATTCCATGAGTCTGGATTTGGTTACAGATAGAGCTGGACAAGCCTTAGCTATATCTAATGGCTTTTGACATGTTATATCAATTTCTTACTGCTTTTGTAAATGAATATATTAAGAAGAAAAAATTACAAATGACCCTTTCTTCACAAACTTTTAGGGTAATCAAGTTCAGTTATTAAAAAATGGATGTTTGCAACATTCATAGTAATTATTTTCAGAAAATTAAAAATGATTAAAAATTATATTTTCATCCCATTCAGATATTATATATTTAACTGTGAGATAATTCTCAGAGATAAATGTCAACTTTTAAAAAATGCTAAATAAATTAAATCAAAATATCCCCTCTAAAATAAATAAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-TMEM132C-2]][[Category:NONHSAG012719]] | + | [[Category:Intergenic]][[Category:lnc-TMEM132C-2]][[Category:NONHSAG012719]][[Category:ENSG00000256193.1]][[Category:Transcripts]] |
Latest revision as of 17:22, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000540882.1 |
Source |
Gencode19 |
Same with |
lnc-TMEM132C-2:3,NONHSAT031887 |
Classification |
intergenic |
Length |
1935 nt |
Genomic location |
chr12+:128399987..128435995 |
Exon number |
4 |
Exons |
128399987..128400227,128429263..128429344,128433369..128433503,128434519..128435995 |
Genome context |
|
Sequence |
000001 AGAAAAACAG GGACATCAAC CAGCAAAGAT GCATCCTCAT TTAATAGAGC TTGAAATTAC TATAATCTGT AAAGTACAGC 000080
000081 GAGAAGAAGA AGTTTCACCT GCCTGCACAT CTGTCGTTGA CTCTCCATCT GACTTGGAGG GACTCTGAGG GACCAACCTG 000160 000161 AGCCTGAGAA GAGGCAAGAT TCCCCTTCAA GGACACACTG GGAACTTACG GACCTCTTTC TCCATGGTGC AGAGCGCAGA 000240 000241 GGTGAACAAA CAGACGCATA ATAGCTCTTG AGCTTGCCAT TGGGAAGTGA AAATCAACTG CTTGAATAAA TGTAAGGACT 000320 000321 CAGAACACCA GACATGGGTG CTCCAATCCA CGTAGTGTTG AGGCAGTGAA GTTTGTGTTC CAGGAACTTC AGAACTCCTG 000400 000401 AATGTATTGG TGTTGATAAA AGGTGATGAG ATGAAGTAGA ATGACCATAA ACTTAGAGGT AGACATCACC TTGTGACTCA 000480 000481 ACAGCAGCCA ATAAGATGGA AATAAAGGCC ATGAAGTTAT CGGATGGCAT CTACAAGGAA TACTTAGATG AGGAGGTGAC 000560 000561 TCTGGTAGCA ATTGTTCTTT TGTCTTTCTC ACCTTCCTTC TTGTCCTGTC TGGGATGCTG AAGTGATGGC TGGTATACAG 000640 000641 ATGCCCTGTT GTGATGTTGA GATAAACATG AGAATAAAAG TCGGCGATTA CAGATGGCAG AGAAGAGAGA GAAAGATAGG 000720 000721 ATGTAGGTGG ATATTGACGG AACTAAGTTT CTATTGCACA AGTTCTACCA CCAACCTCTG GACTTCATGA TATGTGAGGG 000800 000801 AGAAATAAAC TCCTATTTTA GAAGAGATCT ATGTTACCTG CAACTGAACG GAATGCTTAA TTGGCACATC CTATGTGCTC 000880 000881 CAAACCTTCC TTAATTTCTG TGTGTAAGGC ATACTTAGTC TTTACCCATT ATTCTGTTCA CATTCATTCA CTTGATCAGC 000960 000961 CTCCCAACTC TATGGTAAAG AGTTTACTAC AGTTTACTCT ATTAGTAAGG GAGATTCTGG AGCAAGCCCC ACAAATCATA 001040 001041 GATTGAATAC CCATTCATTA AGAGAGAGAT TTAAAGATAC TTCTATCCAA ACACATTTTA AATTTCCAGC ACCTTTGAGG 001120 001121 TGGTGGAGGT TCATGGTGGT TGATAGGGTT TAAATGACTT GTGATTCAAG CTCCATATTA CAATGTAACA GTGCAAAAGT 001200 001201 TCATTTTTTT AAATTTATTT TACTTTAAGT TCTGGTATAC ATGTGTAGAA CATGCGGGTT TGTTACATAG GTATACATGT 001280 001281 GCCATGGTGG TTTGCTGCAC CTATCAAACC GTCACCTAGG TTTTAAGAAC CACATGCATT AGGTATTTGA CCTAATGCTC 001360 001361 TCCCTCATGT TGCCCCCCAA CTCCCTGACA GGGCCCAGTG TGTGATGTTC CCCTCCCTGT GTCCATGTGT TCTCATTGTT 001440 001441 CAACTCCCAC TTATGAGTGA GAACATGTGG TGTTTGATTT TCTGTTCCTG TGTTAGTTTG CTGAGAATGA TGGCTTCCAG 001520 001521 CTTCATCCAT GTCCCTGCAA AGGACACGAA CTCATTCTTT TTTATGGCTT CATAATATTC CATGAGTCTG GATTTGGTTA 001600 001601 CAGATAGAGC TGGACAAGCC TTAGCTATAT CTAATGGCTT TTGACATGTT ATATCAATTT CTTACTGCTT TTGTAAATGA 001680 001681 ATATATTAAG AAGAAAAAAT TACAAATGAC CCTTTCTTCA CAAACTTTTA GGGTAATCAA GTTCAGTTAT TAAAAAATGG 001760 001761 ATGTTTGCAA CATTCATAGT AATTATTTTC AGAAAATTAA AAATGATTAA AAATTATATT TTCATCCCAT TCAGATATTA 001840 001841 TATATTTAAC TGTGAGATAA TTCTCAGAGA TAAATGTCAA CTTTTAAAAA ATGCTAAATA AATTAAATCA AAATATCCCC 001920 001921 TCTAAAATAA ATAAA |