Difference between revisions of "ENST00000553181.1"
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sequence = <dnaseq>CGGCCCGCGGCAGCTGAACGGCAGAGCCTGTAGCTGCACAGCTGTGCTTCCACCTGGCGTTCAGTACCTCGTGCCCGAGAGCGGAAAAGGGAAATCGCGAGCGGAGGACCGATGTGCTGGCCACGTGGGCCCCGCCGGGCCGACTCCGGACCCTGCTGCCGCCCATTCCTCCGGTGCAAGGGACCTGGAAGTGATCCCGGTGCCGCTCTGCTCCCACCAGCTAGGGAGCAGAGGCGCGGGAGGGAAGGGGCGTCCCGGGGGTCGCCAGCACGCTGCGGGCAGGGCTGGCAGCCGCCTCCACGCCCCCGCGCTGGAAGCCTCGTCTTTGTAACATCGAGGTATCCTGTAACTAGATGGGTCCTGGCCTGCGGAGGTAGTTTCCCCTGTGAAGCCAGGGACTCAGCCAGGAGCGTGAGGGGACCCGGATCCTGAGTCTCCAAGCCGCCCACTACCCTCTGCTTTACCGGATGGAACTCATCAGTAACTAGGTCTGAGGCACAGTCAGTGAATACCTGTTTAATGAATGCATGCATAAATGAATGAATGGATGATCCAGCTCTTCCTGGAGCAGGCACGACTTCCACAGAAACAGAGCAAACGCTAGCCGTAAGCAGAAAGAACGTTATAGCTCCAGCGCTGAATGAGACATCTTTGATTCTGTGGTGATGCGGACTTTGTGCCTCTCTGTGAGGAATCACTTTGTTCCAATGACGCAATTTTCCTCACACTCCGGAAGTGTCCTGCACTGCCAGAATCGCCCAGCTTCCCGGCACACCTATCAACCAGTCGTTCCCAGCACTGCCCAGTATGCAGCCTCCAGGCAGAGGGCCTGGATGTCTTGGCAGCCCACCCCAAAGCCCAAACTCCTGCCCGCATGCTGGGAAGGTGAGCCCTTGCCTGGAGAGCCCAGCAGGGGAAATAGAAGGAGGGAAGGAGGCCTGCTCCTTCCCCGGAGCTCTGCTCTGCGGCTGCAGGAAGACCCGCAGAGGCCCTGGGCAGCAGAACTGTGGACAGCAAGGCTGGAGTTGTGAAACCCAACCACTCAGCTGGATTCCAGAAGCTCAGGTGGTGGTGACTAAACCTGGCCTTACTTAAAATGCATGACTTTATTGTCTTTCAATGTATTTTCAGTAAACTTCATCCTCTCCATTACTATTTTCTTTTCTTCGGAAACAAGCAACAGATCTTTGTAAAAAAAATACGTGATGCCACGCACTTAGGAATCACCCTCATGTGGAGATGAGATTTCTTTTTTATTTTTTTTTTCTGAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGACGTGATCTCGTCTCACTGCAACCTCTGCCTCCCAGGCTCAAGCGATTCTCATGCCTCGGCCTCCTGAGTAGCTGGGATTACGGGCATGTACCACCGTGCCCAGCTAATTTTTGCATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCTAGGCTGATCTCAAACTCCTGACCTCAAGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACTGTGCCTGGCCAGAGATGAGACTTCTATGTGTGGTGCTAAAAGAGTGAATAAAAACATTAGATACTACACTGGACATGCTTCTAAGAGCTTAGTCATCTCACCTAAGTTCTGGGACCAACTCCCATTTTCTTAGGATTCCTTGGGCCCCCTTACCACCCCCCCGCCGCTCTGCCCCGCTCATTATGAAAGTTTGGACATCAC</dnaseq>| | sequence = <dnaseq>CGGCCCGCGGCAGCTGAACGGCAGAGCCTGTAGCTGCACAGCTGTGCTTCCACCTGGCGTTCAGTACCTCGTGCCCGAGAGCGGAAAAGGGAAATCGCGAGCGGAGGACCGATGTGCTGGCCACGTGGGCCCCGCCGGGCCGACTCCGGACCCTGCTGCCGCCCATTCCTCCGGTGCAAGGGACCTGGAAGTGATCCCGGTGCCGCTCTGCTCCCACCAGCTAGGGAGCAGAGGCGCGGGAGGGAAGGGGCGTCCCGGGGGTCGCCAGCACGCTGCGGGCAGGGCTGGCAGCCGCCTCCACGCCCCCGCGCTGGAAGCCTCGTCTTTGTAACATCGAGGTATCCTGTAACTAGATGGGTCCTGGCCTGCGGAGGTAGTTTCCCCTGTGAAGCCAGGGACTCAGCCAGGAGCGTGAGGGGACCCGGATCCTGAGTCTCCAAGCCGCCCACTACCCTCTGCTTTACCGGATGGAACTCATCAGTAACTAGGTCTGAGGCACAGTCAGTGAATACCTGTTTAATGAATGCATGCATAAATGAATGAATGGATGATCCAGCTCTTCCTGGAGCAGGCACGACTTCCACAGAAACAGAGCAAACGCTAGCCGTAAGCAGAAAGAACGTTATAGCTCCAGCGCTGAATGAGACATCTTTGATTCTGTGGTGATGCGGACTTTGTGCCTCTCTGTGAGGAATCACTTTGTTCCAATGACGCAATTTTCCTCACACTCCGGAAGTGTCCTGCACTGCCAGAATCGCCCAGCTTCCCGGCACACCTATCAACCAGTCGTTCCCAGCACTGCCCAGTATGCAGCCTCCAGGCAGAGGGCCTGGATGTCTTGGCAGCCCACCCCAAAGCCCAAACTCCTGCCCGCATGCTGGGAAGGTGAGCCCTTGCCTGGAGAGCCCAGCAGGGGAAATAGAAGGAGGGAAGGAGGCCTGCTCCTTCCCCGGAGCTCTGCTCTGCGGCTGCAGGAAGACCCGCAGAGGCCCTGGGCAGCAGAACTGTGGACAGCAAGGCTGGAGTTGTGAAACCCAACCACTCAGCTGGATTCCAGAAGCTCAGGTGGTGGTGACTAAACCTGGCCTTACTTAAAATGCATGACTTTATTGTCTTTCAATGTATTTTCAGTAAACTTCATCCTCTCCATTACTATTTTCTTTTCTTCGGAAACAAGCAACAGATCTTTGTAAAAAAAATACGTGATGCCACGCACTTAGGAATCACCCTCATGTGGAGATGAGATTTCTTTTTTATTTTTTTTTTCTGAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGACGTGATCTCGTCTCACTGCAACCTCTGCCTCCCAGGCTCAAGCGATTCTCATGCCTCGGCCTCCTGAGTAGCTGGGATTACGGGCATGTACCACCGTGCCCAGCTAATTTTTGCATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCTAGGCTGATCTCAAACTCCTGACCTCAAGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACTGTGCCTGGCCAGAGATGAGACTTCTATGTGTGGTGCTAAAAGAGTGAATAAAAACATTAGATACTACACTGGACATGCTTCTAAGAGCTTAGTCATCTCACCTAAGTTCTGGGACCAACTCCCATTTTCTTAGGATTCCTTGGGCCCCCTTACCACCCCCCCGCCGCTCTGCCCCGCTCATTATGAAAGTTTGGACATCAC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-HPCAL1-1]][[Category:NONHSAG026984]] | + | [[Category:Intergenic]][[Category:lnc-HPCAL1-1]][[Category:NONHSAG026984]][[Category:ENSG00000257135.1]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 17:33, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000553181.1 |
| Source |
Gencode19 |
| Same with |
lnc-HPCAL1-1:1,NONHSAT069103 |
| Classification |
intergenic |
| Length |
1737 nt |
| Genomic location |
chr2+:10588820..10591453 |
| Exon number |
4 |
| Exons |
10588820..10589307,10589870..10589997,10590179..10590407,10590562..10591453 |
| Genome context |
|
| Sequence |
000001 CGGCCCGCGG CAGCTGAACG GCAGAGCCTG TAGCTGCACA GCTGTGCTTC CACCTGGCGT TCAGTACCTC GTGCCCGAGA 000080
000081 GCGGAAAAGG GAAATCGCGA GCGGAGGACC GATGTGCTGG CCACGTGGGC CCCGCCGGGC CGACTCCGGA CCCTGCTGCC 000160 000161 GCCCATTCCT CCGGTGCAAG GGACCTGGAA GTGATCCCGG TGCCGCTCTG CTCCCACCAG CTAGGGAGCA GAGGCGCGGG 000240 000241 AGGGAAGGGG CGTCCCGGGG GTCGCCAGCA CGCTGCGGGC AGGGCTGGCA GCCGCCTCCA CGCCCCCGCG CTGGAAGCCT 000320 000321 CGTCTTTGTA ACATCGAGGT ATCCTGTAAC TAGATGGGTC CTGGCCTGCG GAGGTAGTTT CCCCTGTGAA GCCAGGGACT 000400 000401 CAGCCAGGAG CGTGAGGGGA CCCGGATCCT GAGTCTCCAA GCCGCCCACT ACCCTCTGCT TTACCGGATG GAACTCATCA 000480 000481 GTAACTAGGT CTGAGGCACA GTCAGTGAAT ACCTGTTTAA TGAATGCATG CATAAATGAA TGAATGGATG ATCCAGCTCT 000560 000561 TCCTGGAGCA GGCACGACTT CCACAGAAAC AGAGCAAACG CTAGCCGTAA GCAGAAAGAA CGTTATAGCT CCAGCGCTGA 000640 000641 ATGAGACATC TTTGATTCTG TGGTGATGCG GACTTTGTGC CTCTCTGTGA GGAATCACTT TGTTCCAATG ACGCAATTTT 000720 000721 CCTCACACTC CGGAAGTGTC CTGCACTGCC AGAATCGCCC AGCTTCCCGG CACACCTATC AACCAGTCGT TCCCAGCACT 000800 000801 GCCCAGTATG CAGCCTCCAG GCAGAGGGCC TGGATGTCTT GGCAGCCCAC CCCAAAGCCC AAACTCCTGC CCGCATGCTG 000880 000881 GGAAGGTGAG CCCTTGCCTG GAGAGCCCAG CAGGGGAAAT AGAAGGAGGG AAGGAGGCCT GCTCCTTCCC CGGAGCTCTG 000960 000961 CTCTGCGGCT GCAGGAAGAC CCGCAGAGGC CCTGGGCAGC AGAACTGTGG ACAGCAAGGC TGGAGTTGTG AAACCCAACC 001040 001041 ACTCAGCTGG ATTCCAGAAG CTCAGGTGGT GGTGACTAAA CCTGGCCTTA CTTAAAATGC ATGACTTTAT TGTCTTTCAA 001120 001121 TGTATTTTCA GTAAACTTCA TCCTCTCCAT TACTATTTTC TTTTCTTCGG AAACAAGCAA CAGATCTTTG TAAAAAAAAT 001200 001201 ACGTGATGCC ACGCACTTAG GAATCACCCT CATGTGGAGA TGAGATTTCT TTTTTATTTT TTTTTTCTGA GAGTCTCACT 001280 001281 CTGTTGCCCA GGCTGGAGTG CAGTGACGTG ATCTCGTCTC ACTGCAACCT CTGCCTCCCA GGCTCAAGCG ATTCTCATGC 001360 001361 CTCGGCCTCC TGAGTAGCTG GGATTACGGG CATGTACCAC CGTGCCCAGC TAATTTTTGC ATTTTTAGTA GAGATGGGGT 001440 001441 TTCGCCATGT TGGCTAGGCT GATCTCAAAC TCCTGACCTC AAGTGATCCA CCCACCTCGG CCTCCCAAAG TGCTGGGATG 001520 001521 ACAGGCGTGA GCCACTGTGC CTGGCCAGAG ATGAGACTTC TATGTGTGGT GCTAAAAGAG TGAATAAAAA CATTAGATAC 001600 001601 TACACTGGAC ATGCTTCTAA GAGCTTAGTC ATCTCACCTA AGTTCTGGGA CCAACTCCCA TTTTCTTAGG ATTCCTTGGG 001680 001681 CCCCCTTACC ACCCCCCCGC CGCTCTGCCC CGCTCATTAT GAAAGTTTGG ACATCAC |
