Difference between revisions of "ENST00000565433.1"

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sequence = <dnaseq>TAATCTTGCAGCACCTCAGTTTTCCCATTTCTAAAGTGTGCTGCTACCTTCCATGCAGGGCGTTGAGGGGCTTCCCTACGTTATTACGCACAAAGTCCTCCTCACAGTGCCTGGTGTGTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCACTTAGTACGTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAACCCCCGTGGGGTGTGGGAGGAGGGAAGCAGGTCTGTCCTGGGGGAATGTGTGGGACCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGTGCTGTTTACAGAACCTTGTCCAGGTGCCCAGCTGTGGGAGGGCAGCATGGAGAGGAGGAAGAGGGGGCCCCTAGTAGCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAGGTCACTTGCCTGCCTTCTCTGGACTGCACTGTAGGGCCTGGAGACCTGTTCCCCTGTTCCAATTTCCCCACCTCAGTGAAGGCACAACCAACAGCTGCTCCCCGGGCATTTCCAAGACCCTCCAGGCCCCCAGCTCTGAGGACTAGGGTGGAGGCAGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAGGTGGAGGGTGGGGCTTGGCCAGGAGTGACCAGACTACAGAGTGAGGGGTGTGCTTGTGGGGGTGAAGGGTTGGGGTGAGAACTGAGCCCGAGTCGAACTCATCCTCCTCTGCCCTGATGCACTGTGCAACTTGGGGGAGTCACTGTCCCTCTCTGGGCCTCGCTTTCCCCATCTTCGATAGGACTTGGCTCTGCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTGGGCTTGCCTCTGTCTTGGCTCCAGCTCAGGTGTCAGTCTCAGCCCTGTCCCAGCCAGGAACAATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCCCTGGACTATTTTCAGCCCTTGCAGATGGAGTCAGAAGAGGATTTTCCACTCCCAGTACAATGACTGCCCTGGACCATTGTCCAGCAGTGACGCGGGGGACCTGCCTGCCCCAAAATATCTCCTGCCCCTAGTTTCCAAGCCTCTTTGCCCTGCTCCTCACCTCCTGGCCCTGCTCCTTACCTCCCCACCCTGATGTCATTTCCTGGGGCTCTTAACTCCTGAAGGCCATTGTGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACTGGTGGCCCAGAGAGGGCTGTGCCTTACCCAGTCACACAGCAGTCAGTGTGAAGCTTAGGTGTAAGCCCAGGGCTCTTTGGCTGCTCCCACTGCCTCAGCCAACTTCATTAGCTCCAGTCTGTGGCTCCTGGACTGGAGCTACAGTGGTGAGAGCTCACCACTGAGCTTCCTGGGATGGGCACCTGGGATAGCAGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAGCCCAGTGCAGGGGCCTGACCTTAAACCCTTTCTCCCCACTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCCCGCCCCACAAATCCATATGTCAAAATCCCAACTGCCAAGGTGATGGTATTAGAAGGTGGGGCCTTTGGGAAGTAACCAGGTCCTAAGGGTGCAGCCCTCATGAATGGGTTTAGTGCCCTTACAGAATGGACCCCAGAGAGCTCCTCACCCTCTTTCCACCATGTGAGGATATAATGAGAAGTTGGCAGTCTGCAACCTGGAAGAGGTCCCTCACCAGATCCCAACCATGCTGGCACCCCGATCTTAGACTTCCAGTCTTCAGAATGGTGAGAAATAAATGTCTCTTGTTTCTAATCCACCCAGTCGGTGGCATTTTGTTATAGCAGCCCACGCTGACTGTGACTGAACTCAGGGTGACAGAGCAGCAGCTCTGGGGCAAAGGGGAGGGTGGGGGCCACAGGGCAGCTGATGCAGGAGCAGGGCTCTGGCACAGTTCAGCCATCACCAATTCTGGGACTGCAAATTCAGTTTCTTCATCTGGAAAATTGAACTGGTAATACCAATACCTCTTTTCCCGGTTTACTAGACAGAGACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAGTGACGTGTGATTTTCCTTTCCCATCCATAAACTGCGCATTTGGCAAACTCCAAACTTTTGAGTCACTTTTGGGTAACAAAGTCAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCCCTCTCTCCTCTAGGTGTTGGGGCAGGGTGGGGAGGAAAGGGACCAATGTGTCTTTCCTGGTGATGCTACAGCCCTCTCTTGCTGACCTTGCTTCCTGGGCCATCAGTGCCCCCTGCACAGAACTCTCCAAACATCAGTCCACACCTTTGTAAAAACAGTCTCTCCGCTAAGCTATCCCAAAATGACCTGATTAGAGTGTGCAACGTCTTTCCTGCTGGGACTCTGACTGATACCCTGGTCTCCCTGAGTGATTTTCCTGCACACCCTGCTGGGGATGTGGAAGCCTGTCCCCCTCCCACCCCACACCCCACACTTGGCTGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAGAGTGAGGTGGGGTGTGTAGAGAGCTGGGGCAAGGAACCCTGAGAAGATGTCTTACCCCAGTTGTTTCCAGGTTTCTTTAGAAAGCGGGCTATTTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCTCCTCTCTGGCGTGGAATTAAACTGTTAGACCTGCCTTTGTGACCAAAGCAATTGTAAAACGTGGGGGAGGAAATTAAAAGCCTGCCACCTTAGTCCA</dnaseq>|
 
sequence = <dnaseq>TAATCTTGCAGCACCTCAGTTTTCCCATTTCTAAAGTGTGCTGCTACCTTCCATGCAGGGCGTTGAGGGGCTTCCCTACGTTATTACGCACAAAGTCCTCCTCACAGTGCCTGGTGTGTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCACTTAGTACGTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAACCCCCGTGGGGTGTGGGAGGAGGGAAGCAGGTCTGTCCTGGGGGAATGTGTGGGACCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGTGCTGTTTACAGAACCTTGTCCAGGTGCCCAGCTGTGGGAGGGCAGCATGGAGAGGAGGAAGAGGGGGCCCCTAGTAGCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAGGTCACTTGCCTGCCTTCTCTGGACTGCACTGTAGGGCCTGGAGACCTGTTCCCCTGTTCCAATTTCCCCACCTCAGTGAAGGCACAACCAACAGCTGCTCCCCGGGCATTTCCAAGACCCTCCAGGCCCCCAGCTCTGAGGACTAGGGTGGAGGCAGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAGGTGGAGGGTGGGGCTTGGCCAGGAGTGACCAGACTACAGAGTGAGGGGTGTGCTTGTGGGGGTGAAGGGTTGGGGTGAGAACTGAGCCCGAGTCGAACTCATCCTCCTCTGCCCTGATGCACTGTGCAACTTGGGGGAGTCACTGTCCCTCTCTGGGCCTCGCTTTCCCCATCTTCGATAGGACTTGGCTCTGCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTGGGCTTGCCTCTGTCTTGGCTCCAGCTCAGGTGTCAGTCTCAGCCCTGTCCCAGCCAGGAACAATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCCCTGGACTATTTTCAGCCCTTGCAGATGGAGTCAGAAGAGGATTTTCCACTCCCAGTACAATGACTGCCCTGGACCATTGTCCAGCAGTGACGCGGGGGACCTGCCTGCCCCAAAATATCTCCTGCCCCTAGTTTCCAAGCCTCTTTGCCCTGCTCCTCACCTCCTGGCCCTGCTCCTTACCTCCCCACCCTGATGTCATTTCCTGGGGCTCTTAACTCCTGAAGGCCATTGTGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACTGGTGGCCCAGAGAGGGCTGTGCCTTACCCAGTCACACAGCAGTCAGTGTGAAGCTTAGGTGTAAGCCCAGGGCTCTTTGGCTGCTCCCACTGCCTCAGCCAACTTCATTAGCTCCAGTCTGTGGCTCCTGGACTGGAGCTACAGTGGTGAGAGCTCACCACTGAGCTTCCTGGGATGGGCACCTGGGATAGCAGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAGCCCAGTGCAGGGGCCTGACCTTAAACCCTTTCTCCCCACTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCCCGCCCCACAAATCCATATGTCAAAATCCCAACTGCCAAGGTGATGGTATTAGAAGGTGGGGCCTTTGGGAAGTAACCAGGTCCTAAGGGTGCAGCCCTCATGAATGGGTTTAGTGCCCTTACAGAATGGACCCCAGAGAGCTCCTCACCCTCTTTCCACCATGTGAGGATATAATGAGAAGTTGGCAGTCTGCAACCTGGAAGAGGTCCCTCACCAGATCCCAACCATGCTGGCACCCCGATCTTAGACTTCCAGTCTTCAGAATGGTGAGAAATAAATGTCTCTTGTTTCTAATCCACCCAGTCGGTGGCATTTTGTTATAGCAGCCCACGCTGACTGTGACTGAACTCAGGGTGACAGAGCAGCAGCTCTGGGGCAAAGGGGAGGGTGGGGGCCACAGGGCAGCTGATGCAGGAGCAGGGCTCTGGCACAGTTCAGCCATCACCAATTCTGGGACTGCAAATTCAGTTTCTTCATCTGGAAAATTGAACTGGTAATACCAATACCTCTTTTCCCGGTTTACTAGACAGAGACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAGTGACGTGTGATTTTCCTTTCCCATCCATAAACTGCGCATTTGGCAAACTCCAAACTTTTGAGTCACTTTTGGGTAACAAAGTCAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCCCTCTCTCCTCTAGGTGTTGGGGCAGGGTGGGGAGGAAAGGGACCAATGTGTCTTTCCTGGTGATGCTACAGCCCTCTCTTGCTGACCTTGCTTCCTGGGCCATCAGTGCCCCCTGCACAGAACTCTCCAAACATCAGTCCACACCTTTGTAAAAACAGTCTCTCCGCTAAGCTATCCCAAAATGACCTGATTAGAGTGTGCAACGTCTTTCCTGCTGGGACTCTGACTGATACCCTGGTCTCCCTGAGTGATTTTCCTGCACACCCTGCTGGGGATGTGGAAGCCTGTCCCCCTCCCACCCCACACCCCACACTTGGCTGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAGAGTGAGGTGGGGTGTGTAGAGAGCTGGGGCAAGGAACCCTGAGAAGATGTCTTACCCCAGTTGTTTCCAGGTTTCTTTAGAAAGCGGGCTATTTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCTCCTCTCTGGCGTGGAATTAAACTGTTAGACCTGCCTTTGTGACCAAAGCAATTGTAAAACGTGGGGGAGGAAATTAAAAGCCTGCCACCTTAGTCCA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-P2RY2-1]][[Category:NONHSAG009013]][[Category:ENSG00000260401.1]]
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[[Category:Intergenic]][[Category:lnc-P2RY2-1]][[Category:NONHSAG009013]][[Category:ENSG00000260401.1]][[Category:Transcripts]]

Latest revision as of 17:55, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000565433.1

Source

Gencode19

Same with

lnc-P2RY2-1:1,NONHSAT022816

Classification

intergenic

Length

3361 nt

Genomic location

chr11+:72950020..72953380

Exon number

1

Exons

72950020..72953380

Genome context

Sequence
000001 TAATCTTGCA GCACCTCAGT TTTCCCATTT CTAAAGTGTG CTGCTACCTT CCATGCAGGG CGTTGAGGGG CTTCCCTACG 000080
000081 TTATTACGCA CAAAGTCCTC CTCACAGTGC CTGGTGTGTG GTCAGCATTT ATATGCCTGG CACCAGGCCG GGGGCTATGG 000160
000161 AGGCAAATCA GCTGGGCCCT GCCCTCACAG AGTTGACATC ACTTAGTACG TAACCACATT GGGATACATG TTTTGAAGGA 000240
000241 GAGGACAGTG TGTCTGGCCA GTGAGCAACA GTGGGCCATA CGTCTCCAGG GAACCCCCGT GGGGTGTGGG AGGAGGGAAG 000320
000321 CAGGTCTGTC CTGGGGGAAT GTGTGGGACC ACCTCTGCCC TGCTTGGCAG TAGGTGGATT TCAGGACCAT GGGCCTGTGC 000400
000401 TGTTTACAGA ACCTTGTCCA GGTGCCCAGC TGTGGGAGGG CAGCATGGAG AGGAGGAAGA GGGGGCCCCT AGTAGCAAGC 000480
000481 TTCAGAAACT TGCCACTTCA GGCTAGAGAG CTCGCACCCT CCCACGGCAG CAGGGTAGCC ATTTCTCCCT GACTGGGGTG 000560
000561 TCCACCATGG TGCTCTGCAG CCACCTCTCA CTTCATTAAG AGTCCACAGA TCTAGGAGCA GAGGACTGGT CTGGAGCTGG 000640
000641 GCAAGGGCAG GCAGCAAATG GGGAGTTTTT GCTGTGTGAC CTGAGGTCAC TTGCCTGCCT TCTCTGGACT GCACTGTAGG 000720
000721 GCCTGGAGAC CTGTTCCCCT GTTCCAATTT CCCCACCTCA GTGAAGGCAC AACCAACAGC TGCTCCCCGG GCATTTCCAA 000800
000801 GACCCTCCAG GCCCCCAGCT CTGAGGACTA GGGTGGAGGC AGTGTTTCTC CCCAGCATCA AGTGACCAGA GAAGTGAAGT 000880
000881 GACCCCACTG CCGCCACACA GAGCCACACA GTGCGATGTC TGGAGCTCCT GCCTCCTGCA AGGTGGAGGG TGGGGCTTGG 000960
000961 CCAGGAGTGA CCAGACTACA GAGTGAGGGG TGTGCTTGTG GGGGTGAAGG GTTGGGGTGA GAACTGAGCC CGAGTCGAAC 001040
001041 TCATCCTCCT CTGCCCTGAT GCACTGTGCA ACTTGGGGGA GTCACTGTCC CTCTCTGGGC CTCGCTTTCC CCATCTTCGA 001120
001121 TAGGACTTGG CTCTGCCTGG CCACTCCTCC TCCAATGGGG GAATTCCTGG GCTTGCCTCT GTCTTGGCTC CAGCTCAGGT 001200
001201 GTCAGTCTCA GCCCTGTCCC AGCCAGGAAC AATGGGCCAG GCAGGGCCAG TCACCCCCTG TCCCTGGGGG CTCCACCCAC 001280
001281 GGCCCTGGAC TATTTTCAGC CCTTGCAGAT GGAGTCAGAA GAGGATTTTC CACTCCCAGT ACAATGACTG CCCTGGACCA 001360
001361 TTGTCCAGCA GTGACGCGGG GGACCTGCCT GCCCCAAAAT ATCTCCTGCC CCTAGTTTCC AAGCCTCTTT GCCCTGCTCC 001440
001441 TCACCTCCTG GCCCTGCTCC TTACCTCCCC ACCCTGATGT CATTTCCTGG GGCTCTTAAC TCCTGAAGGC CATTGTGAAA 001520
001521 CATCACGTGA GACTCCTGGG AGACACAACC AGTTGGAATG AGTTTTCCCT CCTGGCAGGG ACCCCAGGGA TTGTTTGGCT 001600
001601 GCTTAGTGGG ACTGGTGGCC CAGAGAGGGC TGTGCCTTAC CCAGTCACAC AGCAGTCAGT GTGAAGCTTA GGTGTAAGCC 001680
001681 CAGGGCTCTT TGGCTGCTCC CACTGCCTCA GCCAACTTCA TTAGCTCCAG TCTGTGGCTC CTGGACTGGA GCTACAGTGG 001760
001761 TGAGAGCTCA CCACTGAGCT TCCTGGGATG GGCACCTGGG ATAGCAGCCC AAGTGGTGTG GGTGGAGAGG TGCAGCTCAT 001840
001841 GCTCTGACCT TGGAGTGAGC CCAGTGCAGG GGCCTGACCT TAAACCCTTT CTCCCCACTG AGTCCCATTT TTACCAAATG 001920
001921 TGGCTGTTAG GAACTGAATG TTTGTGTCCC CCGCCCCACA AATCCATATG TCAAAATCCC AACTGCCAAG GTGATGGTAT 002000
002001 TAGAAGGTGG GGCCTTTGGG AAGTAACCAG GTCCTAAGGG TGCAGCCCTC ATGAATGGGT TTAGTGCCCT TACAGAATGG 002080
002081 ACCCCAGAGA GCTCCTCACC CTCTTTCCAC CATGTGAGGA TATAATGAGA AGTTGGCAGT CTGCAACCTG GAAGAGGTCC 002160
002161 CTCACCAGAT CCCAACCATG CTGGCACCCC GATCTTAGAC TTCCAGTCTT CAGAATGGTG AGAAATAAAT GTCTCTTGTT 002240
002241 TCTAATCCAC CCAGTCGGTG GCATTTTGTT ATAGCAGCCC ACGCTGACTG TGACTGAACT CAGGGTGACA GAGCAGCAGC 002320
002321 TCTGGGGCAA AGGGGAGGGT GGGGGCCACA GGGCAGCTGA TGCAGGAGCA GGGCTCTGGC ACAGTTCAGC CATCACCAAT 002400
002401 TCTGGGACTG CAAATTCAGT TTCTTCATCT GGAAAATTGA ACTGGTAATA CCAATACCTC TTTTCCCGGT TTACTAGACA 002480
002481 GAGACAATGC AGTGAGGCAC AAACATGCAA CTGTTTGATT TTCCTCCCAC CCATGCTCCC TGCTCAGTGA CGTGTGATTT 002560
002561 TCCTTTCCCA TCCATAAACT GCGCATTTGG CAAACTCCAA ACTTTTGAGT CACTTTTGGG TAACAAAGTC AGGTTTAAGA 002640
002641 TTTCCATCGC CTGCTTAATT GAATGCTCAC CTGTCCTCTT CCCCCATGCT GTGAGGACCT TCATCACTCC TCTTCTGGGT 002720
002721 CCCTCTCTCC TCTAGGTGTT GGGGCAGGGT GGGGAGGAAA GGGACCAATG TGTCTTTCCT GGTGATGCTA CAGCCCTCTC 002800
002801 TTGCTGACCT TGCTTCCTGG GCCATCAGTG CCCCCTGCAC AGAACTCTCC AAACATCAGT CCACACCTTT GTAAAAACAG 002880
002881 TCTCTCCGCT AAGCTATCCC AAAATGACCT GATTAGAGTG TGCAACGTCT TTCCTGCTGG GACTCTGACT GATACCCTGG 002960
002961 TCTCCCTGAG TGATTTTCCT GCACACCCTG CTGGGGATGT GGAAGCCTGT CCCCCTCCCA CCCCACACCC CACACTTGGC 003040
003041 TGAGATCTCA CAGTGGCAAA GATGTCTTTG AATCCATGGT GCCCAGGGTT CAGCGTGTAG AGTGAGGTGG GGTGTGTAGA 003120
003121 GAGCTGGGGC AAGGAACCCT GAGAAGATGT CTTACCCCAG TTGTTTCCAG GTTTCTTTAG AAAGCGGGCT ATTTTACCCC 003200
003201 ATGTGTCCTC AGATTTATGT CCTGGAACCA AATTCCAAAT CAGCAGCCAC ATGAAAAGTC CCCTCCTCTC TGGCGTGGAA 003280
003281 TTAAACTGTT AGACCTGCCT TTGTGACCAA AGCAATTGTA AAACGTGGGG GAGGAAATTA AAAGCCTGCC ACCTTAGTCC 003360
003361 A
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