Difference between revisions of "ENST00000587187.1"

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sequence = <dnaseq>GGGCTCGCTGGCGCGACCCGCGCGGGCCAGTGGGAGTGCGGGAGGGACGCCGAGGGTCCAGGGTTTGGAGGGGCGCGAGCTGCCGGGGGTTGGAGGTCGAGCGCCGACACCATGTGGATCCAGGTTCGGACCATGGACGGGAGGCAGACCCACACGGTGGACTCGCTGTCCAGGCTGACCAAGGTGGAGGAGCTGAGGCGGAAGATCCAGGAGCTGTTCCACGTGGAGCCAGGCCTGCAGAGGCTGTTCTACAGGGGCAAACAGATGGAGGACGGCCATACCCTCTTCGACTACGAGGTCCGCCTGAATGACACCATCCAGCTCCTGGTCCGCCAGAGCCTCGTGCTCCCCCACAGCACCAAGGAGCGGGACTCCGAGCTCTCCGACACCGACTCCGGCTGCTGCCTGGGCCAGAGTGAGTCAGACAAGTCCTCCACCCACGGTGAGGCGGCCGCCGAGACTGACAGCAGGCCAGCCGATGAGGACATGTGGGATGAGACGGAATTGGGGCTGTACAAGGTCAATGAGTACGTCGATGCTCGGGACACGAACATGGGGGCGTGGTTTGAGGCGCAGGTGGTCAGGGTGACGCGGAAGGCCCCCTCCCGGGACGAGCCCTGCAGCTCCACGTCCAGGCCGGCGCTGGAGGAGGACGTCATTTACCACGTGAAATACGACGACTACCCGGAGAACGGCGTGGTCCAGATGAACTCCAGGGACGTCCGAGCGCGCGCCCGCACCATCATCAAGTGGCAGGACCTGGAGGTGGGCCAGGTGGTCATGCTCAACTACAACCCCGACAACCCCAAGGAGCGGGGCTTCTGGTACGACGCGGAGATCTCCAGGAAGCGCGAGACCAGGACGGCGCGGGAACTCTACGCCAACGTGGTGCTGGGGGATGATTCTCTGAACGACTGTCGGATCATCTTCGTGGACGAAGTCTTCAAGATTGAGCGGCCGGGTGAAGGGAGCCCCATGGTTGACAACCCCATGAGACGGAAGAGCGGGCCGTCCTGCAAGCACTGCAAGGACGACGTGAACAGACTCTGCCGGGTCTGCGCCTGCCACCTGTGCGGGGGCCGGCAGGACCCCGACAAGCAGCTCATGTGCGATGAGTGCGACATGGCCTTCCACATCTACTGCCTGGACCCGCCCCTCAGCAGTGTTCCCAGCGAGGACGAGTGGTACTGCCCTGAGTGCCGGAATGATGCCAGCGAGGTGGTACTGGCGGGAGAGCGGCTGAGAGAGAGCAAGAAGAAGGCGAAGATGGCCTCGGCCACATCGTCCTCACAGCGGGACTGGGGCAAGGGCATGGCCTGTGTGGGCCGCACCAAGGAATGTACCATCGTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGTGGGCACCATGTGGCGGTTCCGAGTCCAGGTCAGCGAGTCGGGTGTCCATCGGCCCCACGTGGCTGGCATACACGGCCGGAGCAACGACGGAGCGTACTCCCTAGTCCTGGCGGGGGGCTATGAGGATGATGTGGACCATGGGAATTTTTTCACATACACGGGTAGTGGTGGTCGAGATCTTTCCGGCAACAAGAGGACCGCGGAACAGTCTTGTGATCAGAAACTCACCAACACCAACAGGGCGCTGGCTCTCAACTGCTTTGCTCCCATCAATGACCAAGAAGGGGCCGAGGCCAAGGACTGGCGGTCGGGGAAGCCGGTCAGGGTGGTGCGCAATGTCAAGGGTGGCAAGAATAGCAAGTACGCCCCCGCTGAGGGCAACCGCTACGATGGCATCTACAAGGTTGTGAAATACTGGCCCGAGAAGGGGAAGTCCGGGTTTCTCGTGTGGCGCTACCTTCTGCGGAGGGACGATGATGAGCCTGGCCCTTGGACGAAGGAGGGGAAGGACCGGATCAAGAAGCTGGGGCTGACCATGCAGTATCCAGAAGGCTACCTGGAAGCCCTGGCCAACCGAGAGCGAGAGAAGGAGAACAGCAAGAGGGAGGAGGAGGAGCAGCAGGAGGGGGGCTTCGCGTCCCCCAGGACGGGCAAGGGCAAGTGGAAGCGGAAGTCGGCAGGAGGTGGCCCGAGCAGGGCGGGTCCCCGCGCCGGACATCCAAGAAAACCAAGGTGGAGCCCTACAGTCTCACGGCCCAGCAGAGCAGCCTCATCAGAGAGGACAAGAGCAACGCCAAGCTGTGGAATGAGGTCCTGGCGTCACTCAAGGACCGGCCGGCGAGCGGCAGCCCGTTCCAGTTGTTCCTGAGTAAAGTGGAGGAGACGTTCCAGTGTATCTGCTGTCAGGAGCTGGTGTTCCGGCCCATCACGACCGTGTGCCAGCACAACGTGTGCAAGGACTGCCTGGACAGATCCTTTCGGGCACAGGTGTTCAGCTGCCCTGCCTGCCGCTACGACCTGGGCCGCAGCTATGCCATGCAGGTGAACCAGCCTCTGCAGACCGTCCTCAACCAGCTCTTCCCCGGCTACGGCAATGGCCGGTGATCTCCAAGCACTTCTCGACAGGCGTTTTGCTGAAAACGTGTCGGAGGGCTCGTTCATCGGCACTGATTTTGTTCTTAGTGGGCTTAACTTAAACAGGTAGTGTTTCCTCCGTTCCCTAAAAAGGTTTGTCTTCCTTTTTTTTTTTATTTTTATTTTTC</dnaseq>|
 
sequence = <dnaseq>GGGCTCGCTGGCGCGACCCGCGCGGGCCAGTGGGAGTGCGGGAGGGACGCCGAGGGTCCAGGGTTTGGAGGGGCGCGAGCTGCCGGGGGTTGGAGGTCGAGCGCCGACACCATGTGGATCCAGGTTCGGACCATGGACGGGAGGCAGACCCACACGGTGGACTCGCTGTCCAGGCTGACCAAGGTGGAGGAGCTGAGGCGGAAGATCCAGGAGCTGTTCCACGTGGAGCCAGGCCTGCAGAGGCTGTTCTACAGGGGCAAACAGATGGAGGACGGCCATACCCTCTTCGACTACGAGGTCCGCCTGAATGACACCATCCAGCTCCTGGTCCGCCAGAGCCTCGTGCTCCCCCACAGCACCAAGGAGCGGGACTCCGAGCTCTCCGACACCGACTCCGGCTGCTGCCTGGGCCAGAGTGAGTCAGACAAGTCCTCCACCCACGGTGAGGCGGCCGCCGAGACTGACAGCAGGCCAGCCGATGAGGACATGTGGGATGAGACGGAATTGGGGCTGTACAAGGTCAATGAGTACGTCGATGCTCGGGACACGAACATGGGGGCGTGGTTTGAGGCGCAGGTGGTCAGGGTGACGCGGAAGGCCCCCTCCCGGGACGAGCCCTGCAGCTCCACGTCCAGGCCGGCGCTGGAGGAGGACGTCATTTACCACGTGAAATACGACGACTACCCGGAGAACGGCGTGGTCCAGATGAACTCCAGGGACGTCCGAGCGCGCGCCCGCACCATCATCAAGTGGCAGGACCTGGAGGTGGGCCAGGTGGTCATGCTCAACTACAACCCCGACAACCCCAAGGAGCGGGGCTTCTGGTACGACGCGGAGATCTCCAGGAAGCGCGAGACCAGGACGGCGCGGGAACTCTACGCCAACGTGGTGCTGGGGGATGATTCTCTGAACGACTGTCGGATCATCTTCGTGGACGAAGTCTTCAAGATTGAGCGGCCGGGTGAAGGGAGCCCCATGGTTGACAACCCCATGAGACGGAAGAGCGGGCCGTCCTGCAAGCACTGCAAGGACGACGTGAACAGACTCTGCCGGGTCTGCGCCTGCCACCTGTGCGGGGGCCGGCAGGACCCCGACAAGCAGCTCATGTGCGATGAGTGCGACATGGCCTTCCACATCTACTGCCTGGACCCGCCCCTCAGCAGTGTTCCCAGCGAGGACGAGTGGTACTGCCCTGAGTGCCGGAATGATGCCAGCGAGGTGGTACTGGCGGGAGAGCGGCTGAGAGAGAGCAAGAAGAAGGCGAAGATGGCCTCGGCCACATCGTCCTCACAGCGGGACTGGGGCAAGGGCATGGCCTGTGTGGGCCGCACCAAGGAATGTACCATCGTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGTGGGCACCATGTGGCGGTTCCGAGTCCAGGTCAGCGAGTCGGGTGTCCATCGGCCCCACGTGGCTGGCATACACGGCCGGAGCAACGACGGAGCGTACTCCCTAGTCCTGGCGGGGGGCTATGAGGATGATGTGGACCATGGGAATTTTTTCACATACACGGGTAGTGGTGGTCGAGATCTTTCCGGCAACAAGAGGACCGCGGAACAGTCTTGTGATCAGAAACTCACCAACACCAACAGGGCGCTGGCTCTCAACTGCTTTGCTCCCATCAATGACCAAGAAGGGGCCGAGGCCAAGGACTGGCGGTCGGGGAAGCCGGTCAGGGTGGTGCGCAATGTCAAGGGTGGCAAGAATAGCAAGTACGCCCCCGCTGAGGGCAACCGCTACGATGGCATCTACAAGGTTGTGAAATACTGGCCCGAGAAGGGGAAGTCCGGGTTTCTCGTGTGGCGCTACCTTCTGCGGAGGGACGATGATGAGCCTGGCCCTTGGACGAAGGAGGGGAAGGACCGGATCAAGAAGCTGGGGCTGACCATGCAGTATCCAGAAGGCTACCTGGAAGCCCTGGCCAACCGAGAGCGAGAGAAGGAGAACAGCAAGAGGGAGGAGGAGGAGCAGCAGGAGGGGGGCTTCGCGTCCCCCAGGACGGGCAAGGGCAAGTGGAAGCGGAAGTCGGCAGGAGGTGGCCCGAGCAGGGCGGGTCCCCGCGCCGGACATCCAAGAAAACCAAGGTGGAGCCCTACAGTCTCACGGCCCAGCAGAGCAGCCTCATCAGAGAGGACAAGAGCAACGCCAAGCTGTGGAATGAGGTCCTGGCGTCACTCAAGGACCGGCCGGCGAGCGGCAGCCCGTTCCAGTTGTTCCTGAGTAAAGTGGAGGAGACGTTCCAGTGTATCTGCTGTCAGGAGCTGGTGTTCCGGCCCATCACGACCGTGTGCCAGCACAACGTGTGCAAGGACTGCCTGGACAGATCCTTTCGGGCACAGGTGTTCAGCTGCCCTGCCTGCCGCTACGACCTGGGCCGCAGCTATGCCATGCAGGTGAACCAGCCTCTGCAGACCGTCCTCAACCAGCTCTTCCCCGGCTACGGCAATGGCCGGTGATCTCCAAGCACTTCTCGACAGGCGTTTTGCTGAAAACGTGTCGGAGGGCTCGTTCATCGGCACTGATTTTGTTCTTAGTGGGCTTAACTTAAACAGGTAGTGTTTCCTCCGTTCCCTAAAAAGGTTTGTCTTCCTTTTTTTTTTTATTTTTATTTTTC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000034063.9]]
+
[[Category:Intergenic]][[Category:ENSG00000034063.9]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 18:24, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000587187.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

2650 nt

Genomic location

chr19+:4910158..4960972

Exon number

17

Exons

4910158..4910258,4910888..4911050,4929234..4929488,4930728..4930888,4932753..4932968,4941540..4941640,4941757..4941943,4944144..4944267,4944355..4944462,4945873..4945977,4947117..4947223,4950623..4950785,4950871..4951008,4954362..4954500,4954662..4954833,4956720..4956824,4960668..4960972

Genome context

Sequence
000001 GGGCTCGCTG GCGCGACCCG CGCGGGCCAG TGGGAGTGCG GGAGGGACGC CGAGGGTCCA GGGTTTGGAG GGGCGCGAGC 000080
000081 TGCCGGGGGT TGGAGGTCGA GCGCCGACAC CATGTGGATC CAGGTTCGGA CCATGGACGG GAGGCAGACC CACACGGTGG 000160
000161 ACTCGCTGTC CAGGCTGACC AAGGTGGAGG AGCTGAGGCG GAAGATCCAG GAGCTGTTCC ACGTGGAGCC AGGCCTGCAG 000240
000241 AGGCTGTTCT ACAGGGGCAA ACAGATGGAG GACGGCCATA CCCTCTTCGA CTACGAGGTC CGCCTGAATG ACACCATCCA 000320
000321 GCTCCTGGTC CGCCAGAGCC TCGTGCTCCC CCACAGCACC AAGGAGCGGG ACTCCGAGCT CTCCGACACC GACTCCGGCT 000400
000401 GCTGCCTGGG CCAGAGTGAG TCAGACAAGT CCTCCACCCA CGGTGAGGCG GCCGCCGAGA CTGACAGCAG GCCAGCCGAT 000480
000481 GAGGACATGT GGGATGAGAC GGAATTGGGG CTGTACAAGG TCAATGAGTA CGTCGATGCT CGGGACACGA ACATGGGGGC 000560
000561 GTGGTTTGAG GCGCAGGTGG TCAGGGTGAC GCGGAAGGCC CCCTCCCGGG ACGAGCCCTG CAGCTCCACG TCCAGGCCGG 000640
000641 CGCTGGAGGA GGACGTCATT TACCACGTGA AATACGACGA CTACCCGGAG AACGGCGTGG TCCAGATGAA CTCCAGGGAC 000720
000721 GTCCGAGCGC GCGCCCGCAC CATCATCAAG TGGCAGGACC TGGAGGTGGG CCAGGTGGTC ATGCTCAACT ACAACCCCGA 000800
000801 CAACCCCAAG GAGCGGGGCT TCTGGTACGA CGCGGAGATC TCCAGGAAGC GCGAGACCAG GACGGCGCGG GAACTCTACG 000880
000881 CCAACGTGGT GCTGGGGGAT GATTCTCTGA ACGACTGTCG GATCATCTTC GTGGACGAAG TCTTCAAGAT TGAGCGGCCG 000960
000961 GGTGAAGGGA GCCCCATGGT TGACAACCCC ATGAGACGGA AGAGCGGGCC GTCCTGCAAG CACTGCAAGG ACGACGTGAA 001040
001041 CAGACTCTGC CGGGTCTGCG CCTGCCACCT GTGCGGGGGC CGGCAGGACC CCGACAAGCA GCTCATGTGC GATGAGTGCG 001120
001121 ACATGGCCTT CCACATCTAC TGCCTGGACC CGCCCCTCAG CAGTGTTCCC AGCGAGGACG AGTGGTACTG CCCTGAGTGC 001200
001201 CGGAATGATG CCAGCGAGGT GGTACTGGCG GGAGAGCGGC TGAGAGAGAG CAAGAAGAAG GCGAAGATGG CCTCGGCCAC 001280
001281 ATCGTCCTCA CAGCGGGACT GGGGCAAGGG CATGGCCTGT GTGGGCCGCA CCAAGGAATG TACCATCGTC CCGTCCAACC 001360
001361 ACTACGGACC CATCCCGGGG ATCCCCGTGG GCACCATGTG GCGGTTCCGA GTCCAGGTCA GCGAGTCGGG TGTCCATCGG 001440
001441 CCCCACGTGG CTGGCATACA CGGCCGGAGC AACGACGGAG CGTACTCCCT AGTCCTGGCG GGGGGCTATG AGGATGATGT 001520
001521 GGACCATGGG AATTTTTTCA CATACACGGG TAGTGGTGGT CGAGATCTTT CCGGCAACAA GAGGACCGCG GAACAGTCTT 001600
001601 GTGATCAGAA ACTCACCAAC ACCAACAGGG CGCTGGCTCT CAACTGCTTT GCTCCCATCA ATGACCAAGA AGGGGCCGAG 001680
001681 GCCAAGGACT GGCGGTCGGG GAAGCCGGTC AGGGTGGTGC GCAATGTCAA GGGTGGCAAG AATAGCAAGT ACGCCCCCGC 001760
001761 TGAGGGCAAC CGCTACGATG GCATCTACAA GGTTGTGAAA TACTGGCCCG AGAAGGGGAA GTCCGGGTTT CTCGTGTGGC 001840
001841 GCTACCTTCT GCGGAGGGAC GATGATGAGC CTGGCCCTTG GACGAAGGAG GGGAAGGACC GGATCAAGAA GCTGGGGCTG 001920
001921 ACCATGCAGT ATCCAGAAGG CTACCTGGAA GCCCTGGCCA ACCGAG