Difference between revisions of "ENST00000592836.1"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>CTCTGTGACTGGCTTGCTTGATGGTTAGGGTCTGATCGCTGCCTGAGACACCATATCGGTACTCCTCAGAGTTGGTGATCACAGGATCTGGTTTGCCACTGAAAGGAATCTTGATGCTGACCACTTCACCTCGGAGAGCATGAACTGCTCCCATGCCTTCAAGAGTTTTAGTGGGTAACCAGGATGGAACTGCGGTGTTGCTTGCAGGAGAAGCTTACTACTGGTTTCTACTTCTCCAACCTCATTGGTGGCTATGCAGGTTCATTGAAGTGGCATACAATTGTTGACCTTTCAAATCTTGTTGGGAAATATTTTTAAAAAGAAACCATTGCATTAGAGGGAATTACTCAAGGAAAGTGCTCAGTTCACTCCATCTAACATCTGCTGAGGCACTGTCTCCAGACTGTCTATATTCAACCCAGTATCCAAGAATTTCTTTACCACCATCACATTCAGGTTTCTCCCACTGTAGAGTGACACTATCTTTGGATATTGAAAGAATCTCAAGTTCTCCTGGTTGGCTTGGTTTATCTGAAATATTTTAAAATAATGAAAAGGGAGTCAGCTTTACTGGTGAAATAAAAGGACCAAACAT</dnaseq>| | sequence = <dnaseq>CTCTGTGACTGGCTTGCTTGATGGTTAGGGTCTGATCGCTGCCTGAGACACCATATCGGTACTCCTCAGAGTTGGTGATCACAGGATCTGGTTTGCCACTGAAAGGAATCTTGATGCTGACCACTTCACCTCGGAGAGCATGAACTGCTCCCATGCCTTCAAGAGTTTTAGTGGGTAACCAGGATGGAACTGCGGTGTTGCTTGCAGGAGAAGCTTACTACTGGTTTCTACTTCTCCAACCTCATTGGTGGCTATGCAGGTTCATTGAAGTGGCATACAATTGTTGACCTTTCAAATCTTGTTGGGAAATATTTTTAAAAAGAAACCATTGCATTAGAGGGAATTACTCAAGGAAAGTGCTCAGTTCACTCCATCTAACATCTGCTGAGGCACTGTCTCCAGACTGTCTATATTCAACCCAGTATCCAAGAATTTCTTTACCACCATCACATTCAGGTTTCTCCCACTGTAGAGTGACACTATCTTTGGATATTGAAAGAATCTCAAGTTCTCCTGGTTGGCTTGGTTTATCTGAAATATTTTAAAATAATGAAAAGGGAGTCAGCTTTACTGGTGAAATAAAAGGACCAAACAT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:ENSG00000237298.4]][[Category:NONHSAG029956]][[Category:Transcripts]] |
Latest revision as of 18:35, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000592836.1 |
| Source |
Gencode19 |
| Same with |
NONHSAT075785 |
| Classification |
antisense |
| Length |
595 nt |
| Genomic location |
chr2+:179393467..179403630 |
| Exon number |
5 |
| Exons |
179393467..179393540,179400459..179400555,179402331..179402418,179402957..179403086,179403425..179403630 |
| Genome context |
|
| Sequence |
000001 CTCTGTGACT GGCTTGCTTG ATGGTTAGGG TCTGATCGCT GCCTGAGACA CCATATCGGT ACTCCTCAGA GTTGGTGATC 000080
000081 ACAGGATCTG GTTTGCCACT GAAAGGAATC TTGATGCTGA CCACTTCACC TCGGAGAGCA TGAACTGCTC CCATGCCTTC 000160 000161 AAGAGTTTTA GTGGGTAACC AGGATGGAAC TGCGGTGTTG CTTGCAGGAG AAGCTTACTA CTGGTTTCTA CTTCTCCAAC 000240 000241 CTCATTGGTG GCTATGCAGG TTCATTGAAG TGGCATACAA TTGTTGACCT TTCAAATCTT GTTGGGAAAT ATTTTTAAAA 000320 000321 AGAAACCATT GCATTAGAGG GAATTACTCA AGGAAAGTGC TCAGTTCACT CCATCTAACA TCTGCTGAGG CACTGTCTCC 000400 000401 AGACTGTCTA TATTCAACCC AGTATCCAAG AATTTCTTTA CCACCATCAC ATTCAGGTTT CTCCCACTGT AGAGTGACAC 000480 000481 TATCTTTGGA TATTGAAAGA ATCTCAAGTT CTCCTGGTTG GCTTGGTTTA TCTGAAATAT TTTAAAATAA TGAAAAGGGA 000560 000561 GTCAGCTTTA CTGGTGAAAT AAAAGGACCA AACAT |
Predicted Small Protein
| Name | ENST00000592836.1_smProtein_152:286 |
| Length | 45 |
| Molecular weight | 5144.9456 |
| Aromaticity | 0.181818181818 |
| Instability index | 47.3909090909 |
| Isoelectric point | 5.42572021484 |
| Runs | 7 |
| Runs residual | 0.00401069518717 |
| Runs probability | 0.0357710651829 |
| Amino acid sequence | MPSRVLVGNQDGTAVLLAGEAYYWFLLLQPHWWLCRFIEVAYNC |
| Secondary structure | LLLEEEEELLLHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHLL |
| PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
| PiMo | oooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiii |
