Difference between revisions of "ENST00000601841.1"

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sequence = <dnaseq>CTCTTCAAGTGGCCTGGGAGCGCGCGCATGCGCGCTGCTGGGAACCGGCCGGGGTGCCGGGTCGAAAGACAGACGCGCGGGCCGGGCGTGCGCGGGCTTGGTGGAGGGCGGGAAGGCTGAAGGGCGGTGACAGGTCGCACTGCCTCGCGAGGGCCAGAACGCCCATTTCTGCAGAGGTGCACTCAGTGGCGTGGGAAATCAAATGCATCCGGTTATCCCAGTTCGGCCTCTCTGGGATTCCGCGGGAGGGGGTGTCTGGTCTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTCCGGTTCAAAGTAGCGCAGTCTGACTGAGCGGGAGGTGGAGTGGAAGGCGAGAATAGGGGTGAAGGATTAGACAGAAGAAGACTTTGAACTAGGAACAGTGGCAACCAGGGTGACCCAGGCTTTTGTGACCCGTAGAGGCAGAAGGTGAGGCGTCTACGCCCTCTCTCACCAGATTTTGGGCGGCCCTGTGGAGACACCCTGTGCCCTTTAAGGGACATGGATTGAGTCGGGATCTCAAAATGTGAGCCTTTCCTCAGACCCAGCTTTGACCCACGTACTCGCCTTTCCTCAACTCATTTTCATACTTTCACTTGACTATATATTTTTTAAAAATTGTGTTAAGCACTTGAGGTTCATTTCTGCCCCTACTGTATGTGCACCCTGTGCCAGAGGGTGGGGTGAACACGTGTGTAGCAGTCATGCGTCCTGTCCACAGGGGCCGATGCACCTCCTTGCAACCCTTTACATTCCACTGTGAAACAAACCTCAACTTTTTCTTATTCCTGTTTTTACACCGTGCTTATAGCTGCCTTAATCCATGTTCCCTTCGGGATGCTGGTATCCAACTGAGAAGTTGACGGAGCATCTATCGTGTGCCAGACACTGTGCTAAGTGCTAACGAGAAATCGGTGAGCAAAACAGAAAAGAAAAAAAAAGAAGAAACGACTGCCAGCATTGAACTTAGTACCTAGCAAAGTAGGTGGACATAAATCAAATTGTCAGACAAGTAAATGAGTAGTTGCAGCTGTGATAAGGGGTATGAAGAATAGGCGCTTCCATGATGGCGGAACATGACCTAGTCTGGGGTGGAGAAGGGGAGATGATTCCAGCTGGAATATGGCAGGTGAGAGTTAACTAATAGCACTGAGTTGGCAGAGGCAGGATGACCTGCCCCAGGCAGGTGCCCCAGAATGAGAGGATGTTGCTGCTGGTGGAACTCCAGCTTTAAAGCGGTGGATCTAGGGCCACATTCCTCAAGGCCATAGCAAACAGGAAAGACCTTTTGGACTAGGGTCTTTGGAGTAGTCACATGAGGCCAAGAACCCAATAGGGCTGAAAGAGAATCTCATCATAGGCTGAATGGGAGCAGAGCATTAGCTGCAACTCCAATGTATTATAGTAAAAGGGGACACATTGATTAGAATGATTATACCCCTCCAAGTGTAAGCTGTTGTTCAATTTACCCAGGGCTTAAAAATATGTCAACTCTTCACAACCATTTTTACTACAAGCCACACTCAACCTGTGTTGTTCCCTGAACCTGTGATGCACTTTCATCCGTTCATGTCTCTACACATCCTTCCTGGGCCCCATAGAGGCCCTGCACCTTAAGGTTTTCAGCTGGATTCCTATTAGCTAGTTATTTTATCTCAGGTACAGAGAGTTAACTTTGCTCCTCAATTTTCAGCACATTGTCATATCAGTCCCTACAGGGTCCTTGTTTACATTATTTTATAGTGTTTATATTATTTTTTCCTCATCTTTCTCGATCCCCACTCTCATTCTTCTAGACACAAGCTGCAATATGTTCGATAGAGATCCTTGATAATTTAACACAGATAATGTTTTGTTTATGCCTCTTGCATTTACAGAGATGGTATTGGACTGTAAATCTCTATTTCCCACTGTTTTACTCAACAGTCTGTTTTTGAGCTATACCCACATTGCTGTGTGTACACCTAGTTTGCTACCGAGTATGCCAGAAATTTTATTCATACATATCCCTACTGATCGGGCATCTAGGTTACTGCCAACTCCCTGAAGTCATACTGTGGTGAAAACCCTTGTGAATGTCTTTACAAACCTTTGCCAGAACTTATTTTGTGCTCTTGTAGAACTTTGTGCATACCCTCTGCTTCCTCATTACACTGCTTGGCATATAGCAGAGACTCAACAAATGTTGAATACCTCTACTATGATGGTTAGTGTACTAGAATAATTTATTTATATTTCTGTTTTCCTTATTGGATTATTAGTACCTTCCAGACAGGGCAAATGTCTTTTCTATCTTTGTGTCCCTGGCACATTAAAAGTGGTTGATTTCAAGGTATGTTCAATGAATGAATAAATACTTATCTTCACTGCCAGTAC</dnaseq>|
 
sequence = <dnaseq>CTCTTCAAGTGGCCTGGGAGCGCGCGCATGCGCGCTGCTGGGAACCGGCCGGGGTGCCGGGTCGAAAGACAGACGCGCGGGCCGGGCGTGCGCGGGCTTGGTGGAGGGCGGGAAGGCTGAAGGGCGGTGACAGGTCGCACTGCCTCGCGAGGGCCAGAACGCCCATTTCTGCAGAGGTGCACTCAGTGGCGTGGGAAATCAAATGCATCCGGTTATCCCAGTTCGGCCTCTCTGGGATTCCGCGGGAGGGGGTGTCTGGTCTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTCCGGTTCAAAGTAGCGCAGTCTGACTGAGCGGGAGGTGGAGTGGAAGGCGAGAATAGGGGTGAAGGATTAGACAGAAGAAGACTTTGAACTAGGAACAGTGGCAACCAGGGTGACCCAGGCTTTTGTGACCCGTAGAGGCAGAAGGTGAGGCGTCTACGCCCTCTCTCACCAGATTTTGGGCGGCCCTGTGGAGACACCCTGTGCCCTTTAAGGGACATGGATTGAGTCGGGATCTCAAAATGTGAGCCTTTCCTCAGACCCAGCTTTGACCCACGTACTCGCCTTTCCTCAACTCATTTTCATACTTTCACTTGACTATATATTTTTTAAAAATTGTGTTAAGCACTTGAGGTTCATTTCTGCCCCTACTGTATGTGCACCCTGTGCCAGAGGGTGGGGTGAACACGTGTGTAGCAGTCATGCGTCCTGTCCACAGGGGCCGATGCACCTCCTTGCAACCCTTTACATTCCACTGTGAAACAAACCTCAACTTTTTCTTATTCCTGTTTTTACACCGTGCTTATAGCTGCCTTAATCCATGTTCCCTTCGGGATGCTGGTATCCAACTGAGAAGTTGACGGAGCATCTATCGTGTGCCAGACACTGTGCTAAGTGCTAACGAGAAATCGGTGAGCAAAACAGAAAAGAAAAAAAAAGAAGAAACGACTGCCAGCATTGAACTTAGTACCTAGCAAAGTAGGTGGACATAAATCAAATTGTCAGACAAGTAAATGAGTAGTTGCAGCTGTGATAAGGGGTATGAAGAATAGGCGCTTCCATGATGGCGGAACATGACCTAGTCTGGGGTGGAGAAGGGGAGATGATTCCAGCTGGAATATGGCAGGTGAGAGTTAACTAATAGCACTGAGTTGGCAGAGGCAGGATGACCTGCCCCAGGCAGGTGCCCCAGAATGAGAGGATGTTGCTGCTGGTGGAACTCCAGCTTTAAAGCGGTGGATCTAGGGCCACATTCCTCAAGGCCATAGCAAACAGGAAAGACCTTTTGGACTAGGGTCTTTGGAGTAGTCACATGAGGCCAAGAACCCAATAGGGCTGAAAGAGAATCTCATCATAGGCTGAATGGGAGCAGAGCATTAGCTGCAACTCCAATGTATTATAGTAAAAGGGGACACATTGATTAGAATGATTATACCCCTCCAAGTGTAAGCTGTTGTTCAATTTACCCAGGGCTTAAAAATATGTCAACTCTTCACAACCATTTTTACTACAAGCCACACTCAACCTGTGTTGTTCCCTGAACCTGTGATGCACTTTCATCCGTTCATGTCTCTACACATCCTTCCTGGGCCCCATAGAGGCCCTGCACCTTAAGGTTTTCAGCTGGATTCCTATTAGCTAGTTATTTTATCTCAGGTACAGAGAGTTAACTTTGCTCCTCAATTTTCAGCACATTGTCATATCAGTCCCTACAGGGTCCTTGTTTACATTATTTTATAGTGTTTATATTATTTTTTCCTCATCTTTCTCGATCCCCACTCTCATTCTTCTAGACACAAGCTGCAATATGTTCGATAGAGATCCTTGATAATTTAACACAGATAATGTTTTGTTTATGCCTCTTGCATTTACAGAGATGGTATTGGACTGTAAATCTCTATTTCCCACTGTTTTACTCAACAGTCTGTTTTTGAGCTATACCCACATTGCTGTGTGTACACCTAGTTTGCTACCGAGTATGCCAGAAATTTTATTCATACATATCCCTACTGATCGGGCATCTAGGTTACTGCCAACTCCCTGAAGTCATACTGTGGTGAAAACCCTTGTGAATGTCTTTACAAACCTTTGCCAGAACTTATTTTGTGCTCTTGTAGAACTTTGTGCATACCCTCTGCTTCCTCATTACACTGCTTGGCATATAGCAGAGACTCAACAAATGTTGAATACCTCTACTATGATGGTTAGTGTACTAGAATAATTTATTTATATTTCTGTTTTCCTTATTGGATTATTAGTACCTTCCAGACAGGGCAAATGTCTTTTCTATCTTTGTGTCCCTGGCACATTAAAAGTGGTTGATTTCAAGGTATGTTCAATGAATGAATAAATACTTATCTTCACTGCCAGTAC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000268066.1]][[Category:NONHSAG055480]]
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[[Category:Intergenic]][[Category:ENSG00000268066.1]][[Category:NONHSAG055480]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 18:48, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000601841.1

Source

Gencode19

Same with

NONHSAT138906

Classification

intergenic

Length

2387 nt

Genomic location

chrX-:146990949..146993335

Exon number

1

Exons

146990949..146993335

Genome context

Sequence
000001 CTCTTCAAGT GGCCTGGGAG CGCGCGCATG CGCGCTGCTG GGAACCGGCC GGGGTGCCGG GTCGAAAGAC AGACGCGCGG 000080
000081 GCCGGGCGTG CGCGGGCTTG GTGGAGGGCG GGAAGGCTGA AGGGCGGTGA CAGGTCGCAC TGCCTCGCGA GGGCCAGAAC 000160
000161 GCCCATTTCT GCAGAGGTGC ACTCAGTGGC GTGGGAAATC AAATGCATCC GGTTATCCCA GTTCGGCCTC TCTGGGATTC 000240
000241 CGCGGGAGGG GGTGTCTGGT CTGGTTTGGT TTGGTTTGGT TTGGTTTGGT TTGGTCCGGT TCAAAGTAGC GCAGTCTGAC 000320
000321 TGAGCGGGAG GTGGAGTGGA AGGCGAGAAT AGGGGTGAAG GATTAGACAG AAGAAGACTT TGAACTAGGA ACAGTGGCAA 000400
000401 CCAGGGTGAC CCAGGCTTTT GTGACCCGTA GAGGCAGAAG GTGAGGCGTC TACGCCCTCT CTCACCAGAT TTTGGGCGGC 000480
000481 CCTGTGGAGA CACCCTGTGC CCTTTAAGGG ACATGGATTG AGTCGGGATC TCAAAATGTG AGCCTTTCCT CAGACCCAGC 000560
000561 TTTGACCCAC GTACTCGCCT TTCCTCAACT CATTTTCATA CTTTCACTTG ACTATATATT TTTTAAAAAT TGTGTTAAGC 000640
000641 ACTTGAGGTT CATTTCTGCC CCTACTGTAT GTGCACCCTG TGCCAGAGGG TGGGGTGAAC ACGTGTGTAG CAGTCATGCG 000720
000721 TCCTGTCCAC AGGGGCCGAT GCACCTCCTT GCAACCCTTT ACATTCCACT GTGAAACAAA CCTCAACTTT TTCTTATTCC 000800
000801 TGTTTTTACA CCGTGCTTAT AGCTGCCTTA ATCCATGTTC CCTTCGGGAT GCTGGTATCC AACTGAGAAG TTGACGGAGC 000880
000881 ATCTATCGTG TGCCAGACAC TGTGCTAAGT GCTAACGAGA AATCGGTGAG CAAAACAGAA AAGAAAAAAA AAGAAGAAAC 000960
000961 GACTGCCAGC ATTGAACTTA GTACCTAGCA AAGTAGGTGG ACATAAATCA AATTGTCAGA CAAGTAAATG AGTAGTTGCA 001040
001041 GCTGTGATAA GGGGTATGAA GAATAGGCGC TTCCATGATG GCGGAACATG ACCTAGTCTG GGGTGGAGAA GGGGAGATGA 001120
001121 TTCCAGCTGG AATATGGCAG GTGAGAGTTA ACTAATAGCA CTGAGTTGGC AGAGGCAGGA TGACCTGCCC CAGGCAGGTG 001200
001201 CCCCAGAATG AGAGGATGTT GCTGCTGGTG GAACTCCAGC TTTAAAGCGG TGGATCTAGG GCCACATTCC TCAAGGCCAT 001280
001281 AGCAAACAGG AAAGACCTTT TGGACTAGGG TCTTTGGAGT AGTCACATGA GGCCAAGAAC CCAATAGGGC TGAAAGAGAA 001360
001361 TCTCATCATA GGCTGAATGG GAGCAGAGCA TTAGCTGCAA CTCCAATGTA TTATAGTAAA AGGGGACACA TTGATTAGAA 001440
001441 TGATTATACC CCTCCAAGTG TAAGCTGTTG TTCAATTTAC CCAGGGCTTA AAAATATGTC AACTCTTCAC AACCATTTTT 001520
001521 ACTACAAGCC ACACTCAACC TGTGTTGTTC CCTGAACCTG TGATGCACTT TCATCCGTTC ATGTCTCTAC ACATCCTTCC 001600
001601 TGGGCCCCAT AGAGGCCCTG CACCTTAAGG TTTTCAGCTG GATTCCTATT AGCTAGTTAT TTTATCTCAG GTACAGAGAG 001680
001681 TTAACTTTGC TCCTCAATTT TCAGCACATT GTCATATCAG TCCCTACAGG GTCCTTGTTT ACATTATTTT ATAGTGTTTA 001760
001761 TATTATTTTT TCCTCATCTT TCTCGATCCC CACTCTCATT CTTCTAGACA CAAGCTGCAA TATGTTCGAT AGAGATCCTT 001840
001841 GATAATTTAA CACAGATAAT GTTTTGTTTA TGCCTCTTGC ATTTACAGAG ATGGTATTGG ACTGTAAATC TCTATTTCCC 001920
001921 ACTGTTTTAC TCAACAGTCT GTTTTTGAGC TATACCCACA TTGCTGTGTG TACACCTAGT TTGCTACCGA GTATGCCAGA 002000
002001 AATTTTATTC ATACATATCC CTACTGATCG GGCATCTAGG TTACTGCCAA CTCCCTGAAG TCATACTGTG GTGAAAACCC 002080
002081 TTGTGAATGT CTTTACAAAC CTTTGCCAGA ACTTATTTTG TGCTCTTGTA GAACTTTGTG CATACCCTCT GCTTCCTCAT 002160
002161 TACACTGCTT GGCATATAGC AGAGACTCAA CAAATGTTGA ATACCTCTAC TATGATGGTT AGTGTACTAG AATAATTTAT 002240
002241 TTATATTTCT GTTTTCCTTA TTGGATTATT AGTACCTTCC AGACAGGGCA AATGTCTTTT CTATCTTTGT GTCCCTGGCA 002320
002321 CATTAAAAGT GGTTGATTTC AAGGTATGTT CAATGAATGA ATAAATACTT ATCTTCACTG CCAGTAC
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