Difference between revisions of "NONHSAT001381"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TTCACCAGCTCCATGCAGGGACATCACAGGGCTGCCCTCCATGAGCAGAGGAGGAGGGCTGCCTGGCAGAGCGTTTCACACTCCAGGTTAGCCAGAAAGAGCATCTTCATTTTTGTTTCCACACAACACTTCTCTGTGAGCCTGTTGGCCAACAAAGTGGCGGCCGATTGTTGGAGGAGCCAGCCAACCATCTTGTCTAACTTCAGATTCTTCAGGGCTAGAATATGTTCACCCCAGAGGCTTAGATGAAGCACATTTGCGGCTACTCGGGCAGATGGTCTCTGCAACAGGAAGGGAAGCTGTAGCTAGAACATCTGTTAACACAGTCTCAACCCAAAGCCTGCTTTGTTAG</dnaseq>| | sequence = <dnaseq>TTCACCAGCTCCATGCAGGGACATCACAGGGCTGCCCTCCATGAGCAGAGGAGGAGGGCTGCCTGGCAGAGCGTTTCACACTCCAGGTTAGCCAGAAAGAGCATCTTCATTTTTGTTTCCACACAACACTTCTCTGTGAGCCTGTTGGCCAACAAAGTGGCGGCCGATTGTTGGAGGAGCCAGCCAACCATCTTGTCTAACTTCAGATTCTTCAGGGCTAGAATATGTTCACCCCAGAGGCTTAGATGAAGCACATTTGCGGCTACTCGGGCAGATGGTCTCTGCAACAGGAAGGGAAGCTGTAGCTAGAACATCTGTTAACACAGTCTCAACCCAAAGCCTGCTTTGTTAG</dnaseq>| | ||
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| − | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG000579]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 19:17, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT001381 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
352 nt |
| Genomic location |
chr1-:20976856..20977207 |
| Exon number |
1 |
| Exons |
20976856..20977207 |
| Genome context |
|
| Sequence |
000001 TTCACCAGCT CCATGCAGGG ACATCACAGG GCTGCCCTCC ATGAGCAGAG GAGGAGGGCT GCCTGGCAGA GCGTTTCACA 000080
000081 CTCCAGGTTA GCCAGAAAGA GCATCTTCAT TTTTGTTTCC ACACAACACT TCTCTGTGAG CCTGTTGGCC AACAAAGTGG 000160 000161 CGGCCGATTG TTGGAGGAGC CAGCCAACCA TCTTGTCTAA CTTCAGATTC TTCAGGGCTA GAATATGTTC ACCCCAGAGG 000240 000241 CTTAGATGAA GCACATTTGC GGCTACTCGG GCAGATGGTC TCTGCAACAG GAAGGGAAGC TGTAGCTAGA ACATCTGTTA 000320 000321 ACACAGTCTC AACCCAAAGC CTGCTTTGTT AG |
Predicted Small Protein
| Name | NONHSAT001381_smProtein_245:304 |
| Length | 20 |
| Molecular weight | 2221.5606 |
| Aromaticity | 0.105263157895 |
| Instability index | 86.7736842105 |
| Isoelectric point | 9.18670654297 |
| Runs | 5 |
| Runs residual | 0.0123839009288 |
| Runs probability | 0.0382264617558 |
| Amino acid sequence | MKHICGYSGRWSLQQEGKL |
| Secondary structure | LLEEELLLLLLLHHHLLLL |
| PRMN | - |
| PiMo | - |
