Difference between revisions of "NONHSAT001495"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AGAGCCCCTTCTCGCCTCAGTTCGCCTCTGTGAACATCACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGTGGACAGCATTACCCTGTCGTGGTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGGACTATGAGCTGCAGTACTATGAGAAGGTACCTATTGGCTGGGTGCTGTCCCCATCACCCACCTCCCTGAGGGCCCCTCTCCCAGGCTGAGGCCTGGGAGTTCTGCCCCACCGCAAGATGAGACGCACtggtgcagcagaaagagcactggccttggagtcaggctgcctggctcccaatccagctccgctccttcccactgtgagacctcaggcaggtgccttgacctctctggatctcacttttctggtctggaggatACACCCAGCAATCTCAGTGAAATGCAACAGtcacatccctttccctaccacgaccctttcatcttgacctcagtggcttgatgttgggaaaaactgggtttccaaaaagctgcacttatgaagt</dnaseq>| | sequence = <dnaseq>AGAGCCCCTTCTCGCCTCAGTTCGCCTCTGTGAACATCACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGTGGACAGCATTACCCTGTCGTGGTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGGACTATGAGCTGCAGTACTATGAGAAGGTACCTATTGGCTGGGTGCTGTCCCCATCACCCACCTCCCTGAGGGCCCCTCTCCCAGGCTGAGGCCTGGGAGTTCTGCCCCACCGCAAGATGAGACGCACtggtgcagcagaaagagcactggccttggagtcaggctgcctggctcccaatccagctccgctccttcccactgtgagacctcaggcaggtgccttgacctctctggatctcacttttctggtctggaggatACACCCAGCAATCTCAGTGAAATGCAACAGtcacatccctttccctaccacgaccctttcatcttgacctcagtggcttgatgttgggaaaaactgggtttccaaaaagctgcacttatgaagt</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG000639]][[Category:Transcripts]] |
Latest revision as of 19:17, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT001495 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
536 nt |
| Genomic location |
chr1+:23191652..23209333 |
| Exon number |
2 |
| Exons |
23191652..23191705,23208852..23209333 |
| Genome context |
|
| Sequence |
000001 AGAGCCCCTT CTCGCCTCAG TTCGCCTCTG TGAACATCAC CACCAACCAG GCAGCTCCAT CGGCAGTGTC CATCATGCAT 000080
000081 CAGGTGAGCC GCACCGTGGA CAGCATTACC CTGTCGTGGT CCCAGCCGGA CCAGCCCAAT GGCGTGATCC TGGACTATGA 000160 000161 GCTGCAGTAC TATGAGAAGG TACCTATTGG CTGGGTGCTG TCCCCATCAC CCACCTCCCT GAGGGCCCCT CTCCCAGGCT 000240 000241 GAGGCCTGGG AGTTCTGCCC CACCGCAAGA TGAGACGCAC tggtgcagca gaaagagcac tggccttgga gtcaggctgc 000320 000321 ctggctccca atccagctcc gctccttccc actgtgagac ctcaggcagg tgccttgacc tctctggatc tcacttttct 000400 000401 ggtctggagg atACACCCAG CAATCTCAGT GAAATGCAAC AGtcacatcc ctttccctac cacgaccctt tcatcttgac 000480 000481 ctcagtggct tgatgttggg aaaaactggg tttccaaaaa gctgcactta tgaagt |
Predicted Small Protein
| Name | NONHSAT001495_smProtein_269:478 |
| Length | 70 |
| Molecular weight | 7335.4933 |
| Aromaticity | 0.0434782608696 |
| Instability index | 55.1434782609 |
| Isoelectric point | 9.68048095703 |
| Runs | 9 |
| Runs residual | 0.0088965418281 |
| Runs probability | 0.0348387603289 |
| Amino acid sequence | MRRTGAAERALALESGCLAPNPAPLLPTVRPQAGALTSLDLTFLVWRIHPAISVKCNSHI PFPTTTLSS |
| Secondary structure | LLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLHHHLLLHHHHHHHLLLLEEEELLLLL LLLLLLLLL |
| PRMN | - |
| PiMo | - |
