Difference between revisions of "NONHSAT007800"

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sequence = <dnaseq>GAGAGCCGGACAGGGCAGCGGCCGGCACTACCGCGCTGCGATTTGCGCAGAGCTGAAGAAGCCCCTGACCATTGAAGAGGTGGCCCCCGCCCCGTCGGGCCTCACGAGGTCAGAGTTGATGTCCATTTCTGTGGAGTTAACTTTGGTGATATTTTGATCTGCCGTGATCAATATCAGGAAAGGCCCCATCTTCCCTTCACACCTGGAATGGACTTTTCTGGGACAGTATTGGAGACAGGCACAGATGTCAGGACAGTTAAAGAGGTAAATTAATTGAGGGAGATAGAGTTATTGGCACAAGAAACTTTAATTGTATGGCTGAAGAATGCGTCACTGACCAGAAGGACCTGTGGCAGATTCCAGAAAAGGTCTCCCTATAAGAAGCTGCTGTCCTCCCTATAACTTATGGCACTGCGATTTTTGCTCTTGAGCATTGGGCCCGTACCCAGCCTGGGTAATATAGCTGCTGCTGGAAGTGACGAGAAGTGCAAGCTGGCGATGCAGAGGGGTGCGCAGTCCAGCGTGAACTACAGTCAGGGCAGCCTGAAGGATGCACCTGGCATGGGAGGGCAGGATTGTGGTGGTGGGATTTGCTGGAGGAAACATTGCTTCTGAACCAGCCAACCTTCTGCTCCTGAAGAATATCTCTGCTATGGGCCTGTACTGTGGTCAATACAAAGATATGAACTTTCCCGTCTTCTCCAAGAGCCTATCTTCAGTGCTTCAGTACTGCCAGCAAGGGTGCATCCAGCTATATGTCAGAATGGTTTTCAAGCTGGACGAGGTCAATGATGCCTTCCTTCATGTGATACAGGGGAAATCCGTGGGCAAGGTGCTTCTCGCTCTTAAATAAATCCTTGCCTGAGCAGCAAAGTTAACATGTCCAGATCAAAACTCCACATCTTTCCCCAAAACCTGATTTCCCTTCTGTGTTTCCAAAGGTGTTACCACTTTCCTTACTAATCCAGGTTTAAAATCTTGGAGTCACCTTTGATTCTGTTTACTAATTGCTCCTAATTAATATGATTATATAGTTTATTGTCCAAACCTTTTCGAGAGTAAAAGGGTGCCATTAGTAATTACATCAGGAAAACATATCCCAGGCAAACCAGGATATATGGTCAGCCTACTTGATGCATTATGAAATGCGGTGATTGCCGAGTTCTGTCATTCTCACCTCTAAGATATCTCTCATGTCCATATCCTCTTTTCCATTCTGACTAATTAAGCCTCAACTGCTATTACCAGTGACCTTCTAACTGCTTTTCCTACCTTTAAGCTATTCTCACCCCCTCCATCCTTGTGATGCATTATTGCCATCGTGATCTTCCCGAAGCATAGCTCTGACTATGGCCCATCTCAGAAAACCTACAGTGGCTCACCATTGCCTGATGGTGGAGTTCAGAGCCCTTGAGCTAGCATTTCATTATGACCGTGATTTTTCCCCGCACCACTTTCCAGCCTTGTGGTCCACAATTCCACTGGGCCTTAAGTATGTACTGAACTTTCCTGCCTCCCTCATTTTGCTCTGCTTGTGCAATTTTTTCCACCCTCCATCTCTGTCAAACGTAAGCCTTCCTGACCTCTAAGACCTACCTTTGTCATGTACCTTTACCCTCAGGCAAGGAGCAATCTCTTCTCTTCCTCTTCTACCTTGCTGTAGCTTCTCCCCAAGGATTTATCACATTCTGCCTTGAATCATAGGGAACAGCATGTGTAGTGGAATGAACACAGGCCTCTGAATCCAAGATACGAGTTTAAATCCCAGCTTTGGAGGTGGTTACTTAAAGTCTCAGTGCCTTCATTCTTCTTCCTATATAAAGTAGATATTACAATATCTAACTTACAGAGTCATTGGGAGCTATACATGCAGCGATTGGGTAAAGCACCTGGCACATGGCAAGCGATTAGCAAATGCTGGTTACTTCTACTTCTTTCTCTTCCCTTTTCCCAGTCTATCATAATTTCCTTGAGAGCAGGCACCATGTCTTATTTACCCTTGTATTTCCGTACTTCCCATAGTGAGTTACCCTTAGTAAATACTCAGTAAGTTGAATTGAATTTAAATTACCTGTAAGTCTTAAAATGTGGGATTAAATTAAGAATATATTGTCCTGGAAATACCCAAATGTCTATTGATGGATGAATGGATAAACAAAATGTGGTATACACATAATGGAATATTATTCAGCCTTAAAAAGGAATGAAATTCTGACATGTGCTACAATATGATGAACCTGGAAGACATTATATGTGAAATAAGCCAGACAGAAAAGGACAAATACTATATGATTCCACTTATATGAAGTACCTAGAGTAGTGTAATTCATAGAAACAGAAAGTACAGGTTGACATCCAAAATCTGAAATGAGAAATGCTCCAAAAACTGAAACTTTTTCAATGCCGACACGATGCTCAAAGAAAATGCTAATTGGAGCATTTCAGATTTTGGATTTTTGGATTTGGGATGCTCAACTGGCATAATGTGAATATTCCAAACTCTGAAAAAATCTGAAGTCTAAAACACTTCTGGTCTCAAGGATTTTGGATAAAGGATACTCAATGTGCAACATGTAGAATGGTGGTTGCAAGGTGGGAGGAGAGAATGGAGAGTTACTGTTTAATGATACAATGTTTCCGTTTGGGAAGATGGAAAGTTTTGGAGATGTGTGATGGTTATGGTTGCGCAACAATGGGAAGGTACTTAGTACTGCTTAACTGTGCACACTTAAAAATGGTAAAAATGATAAATTTTGTGTATGTCTTAAAA</dnaseq>|
 
sequence = <dnaseq>GAGAGCCGGACAGGGCAGCGGCCGGCACTACCGCGCTGCGATTTGCGCAGAGCTGAAGAAGCCCCTGACCATTGAAGAGGTGGCCCCCGCCCCGTCGGGCCTCACGAGGTCAGAGTTGATGTCCATTTCTGTGGAGTTAACTTTGGTGATATTTTGATCTGCCGTGATCAATATCAGGAAAGGCCCCATCTTCCCTTCACACCTGGAATGGACTTTTCTGGGACAGTATTGGAGACAGGCACAGATGTCAGGACAGTTAAAGAGGTAAATTAATTGAGGGAGATAGAGTTATTGGCACAAGAAACTTTAATTGTATGGCTGAAGAATGCGTCACTGACCAGAAGGACCTGTGGCAGATTCCAGAAAAGGTCTCCCTATAAGAAGCTGCTGTCCTCCCTATAACTTATGGCACTGCGATTTTTGCTCTTGAGCATTGGGCCCGTACCCAGCCTGGGTAATATAGCTGCTGCTGGAAGTGACGAGAAGTGCAAGCTGGCGATGCAGAGGGGTGCGCAGTCCAGCGTGAACTACAGTCAGGGCAGCCTGAAGGATGCACCTGGCATGGGAGGGCAGGATTGTGGTGGTGGGATTTGCTGGAGGAAACATTGCTTCTGAACCAGCCAACCTTCTGCTCCTGAAGAATATCTCTGCTATGGGCCTGTACTGTGGTCAATACAAAGATATGAACTTTCCCGTCTTCTCCAAGAGCCTATCTTCAGTGCTTCAGTACTGCCAGCAAGGGTGCATCCAGCTATATGTCAGAATGGTTTTCAAGCTGGACGAGGTCAATGATGCCTTCCTTCATGTGATACAGGGGAAATCCGTGGGCAAGGTGCTTCTCGCTCTTAAATAAATCCTTGCCTGAGCAGCAAAGTTAACATGTCCAGATCAAAACTCCACATCTTTCCCCAAAACCTGATTTCCCTTCTGTGTTTCCAAAGGTGTTACCACTTTCCTTACTAATCCAGGTTTAAAATCTTGGAGTCACCTTTGATTCTGTTTACTAATTGCTCCTAATTAATATGATTATATAGTTTATTGTCCAAACCTTTTCGAGAGTAAAAGGGTGCCATTAGTAATTACATCAGGAAAACATATCCCAGGCAAACCAGGATATATGGTCAGCCTACTTGATGCATTATGAAATGCGGTGATTGCCGAGTTCTGTCATTCTCACCTCTAAGATATCTCTCATGTCCATATCCTCTTTTCCATTCTGACTAATTAAGCCTCAACTGCTATTACCAGTGACCTTCTAACTGCTTTTCCTACCTTTAAGCTATTCTCACCCCCTCCATCCTTGTGATGCATTATTGCCATCGTGATCTTCCCGAAGCATAGCTCTGACTATGGCCCATCTCAGAAAACCTACAGTGGCTCACCATTGCCTGATGGTGGAGTTCAGAGCCCTTGAGCTAGCATTTCATTATGACCGTGATTTTTCCCCGCACCACTTTCCAGCCTTGTGGTCCACAATTCCACTGGGCCTTAAGTATGTACTGAACTTTCCTGCCTCCCTCATTTTGCTCTGCTTGTGCAATTTTTTCCACCCTCCATCTCTGTCAAACGTAAGCCTTCCTGACCTCTAAGACCTACCTTTGTCATGTACCTTTACCCTCAGGCAAGGAGCAATCTCTTCTCTTCCTCTTCTACCTTGCTGTAGCTTCTCCCCAAGGATTTATCACATTCTGCCTTGAATCATAGGGAACAGCATGTGTAGTGGAATGAACACAGGCCTCTGAATCCAAGATACGAGTTTAAATCCCAGCTTTGGAGGTGGTTACTTAAAGTCTCAGTGCCTTCATTCTTCTTCCTATATAAAGTAGATATTACAATATCTAACTTACAGAGTCATTGGGAGCTATACATGCAGCGATTGGGTAAAGCACCTGGCACATGGCAAGCGATTAGCAAATGCTGGTTACTTCTACTTCTTTCTCTTCCCTTTTCCCAGTCTATCATAATTTCCTTGAGAGCAGGCACCATGTCTTATTTACCCTTGTATTTCCGTACTTCCCATAGTGAGTTACCCTTAGTAAATACTCAGTAAGTTGAATTGAATTTAAATTACCTGTAAGTCTTAAAATGTGGGATTAAATTAAGAATATATTGTCCTGGAAATACCCAAATGTCTATTGATGGATGAATGGATAAACAAAATGTGGTATACACATAATGGAATATTATTCAGCCTTAAAAAGGAATGAAATTCTGACATGTGCTACAATATGATGAACCTGGAAGACATTATATGTGAAATAAGCCAGACAGAAAAGGACAAATACTATATGATTCCACTTATATGAAGTACCTAGAGTAGTGTAATTCATAGAAACAGAAAGTACAGGTTGACATCCAAAATCTGAAATGAGAAATGCTCCAAAAACTGAAACTTTTTCAATGCCGACACGATGCTCAAAGAAAATGCTAATTGGAGCATTTCAGATTTTGGATTTTTGGATTTGGGATGCTCAACTGGCATAATGTGAATATTCCAAACTCTGAAAAAATCTGAAGTCTAAAACACTTCTGGTCTCAAGGATTTTGGATAAAGGATACTCAATGTGCAACATGTAGAATGGTGGTTGCAAGGTGGGAGGAGAGAATGGAGAGTTACTGTTTAATGATACAATGTTTCCGTTTGGGAAGATGGAAAGTTTTGGAGATGTGTGATGGTTATGGTTGCGCAACAATGGGAAGGTACTTAGTACTGCTTAACTGTGCACACTTAAAAATGGTAAAAATGATAAATTTTGTGTATGTCTTAAAA</dnaseq>|
 
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[[Category:Intergenic]][[Category:NONHSAG003561]]
+
[[Category:Intergenic]][[Category:NONHSAG003561]][[Category:Transcripts]]

Latest revision as of 19:47, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT007800

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2770 nt

Genomic location

chr1-:177975295..178006936

Exon number

8

Exons

177975295..177977284,177991575..177991803,177995290..177995390,178000686..178000795,178001565..178001631,178002149..178002220,178003840..178003936,178006829..178006936

Genome context

Sequence
000001 GAGAGCCGGA CAGGGCAGCG GCCGGCACTA CCGCGCTGCG ATTTGCGCAG AGCTGAAGAA GCCCCTGACC ATTGAAGAGG 000080
000081 TGGCCCCCGC CCCGTCGGGC CTCACGAGGT CAGAGTTGAT GTCCATTTCT GTGGAGTTAA CTTTGGTGAT ATTTTGATCT 000160
000161 GCCGTGATCA ATATCAGGAA AGGCCCCATC TTCCCTTCAC ACCTGGAATG GACTTTTCTG GGACAGTATT GGAGACAGGC 000240
000241 ACAGATGTCA GGACAGTTAA AGAGGTAAAT TAATTGAGGG AGATAGAGTT ATTGGCACAA GAAACTTTAA TTGTATGGCT 000320
000321 GAAGAATGCG TCACTGACCA GAAGGACCTG TGGCAGATTC CAGAAAAGGT CTCCCTATAA GAAGCTGCTG TCCTCCCTAT 000400
000401 AACTTATGGC ACTGCGATTT TTGCTCTTGA GCATTGGGCC CGTACCCAGC CTGGGTAATA TAGCTGCTGC TGGAAGTGAC 000480
000481 GAGAAGTGCA AGCTGGCGAT GCAGAGGGGT GCGCAGTCCA GCGTGAACTA CAGTCAGGGC AGCCTGAAGG ATGCACCTGG 000560
000561 CATGGGAGGG CAGGATTGTG GTGGTGGGAT TTGCTGGAGG AAACATTGCT TCTGAACCAG CCAACCTTCT GCTCCTGAAG 000640
000641 AATATCTCTG CTATGGGCCT GTACTGTGGT CAATACAAAG ATATGAACTT TCCCGTCTTC TCCAAGAGCC TATCTTCAGT 000720
000721 GCTTCAGTAC TGCCAGCAAG GGTGCATCCA GCTATATGTC AGAATGGTTT TCAAGCTGGA CGAGGTCAAT GATGCCTTCC 000800
000801 TTCATGTGAT ACAGGGGAAA TCCGTGGGCA AGGTGCTTCT CGCTCTTAAA TAAATCCTTG CCTGAGCAGC AAAGTTAACA 000880
000881 TGTCCAGATC AAAACTCCAC ATCTTTCCCC AAAACCTGAT TTCCCTTCTG TGTTTCCAAA GGTGTTACCA CTTTCCTTAC 000960
000961 TAATCCAGGT TTAAAATCTT GGAGTCACCT TTGATTCTGT TTACTAATTG CTCCTAATTA ATATGATTAT ATAGTTTATT 001040
001041 GTCCAAACCT TTTCGAGAGT AAAAGGGTGC CATTAGTAAT TACATCAGGA AAACATATCC CAGGCAAACC AGGATATATG 001120
001121 GTCAGCCTAC TTGATGCATT ATGAAATGCG GTGATTGCCG AGTTCTGTCA TTCTCACCTC TAAGATATCT CTCATGTCCA 001200
001201 TATCCTCTTT TCCATTCTGA CTAATTAAGC CTCAACTGCT ATTACCAGTG ACCTTCTAAC TGCTTTTCCT ACCTTTAAGC 001280
001281 TATTCTCACC CCCTCCATCC TTGTGATGCA TTATTGCCAT CGTGATCTTC CCGAAGCATA GCTCTGACTA TGGCCCATCT 001360
001361 CAGAAAACCT ACAGTGGCTC ACCATTGCCT GATGGTGGAG TTCAGAGCCC TTGAGCTAGC ATTTCATTAT GACCGTGATT 001440
001441 TTTCCCCGCA CCACTTTCCA GCCTTGTGGT CCACAATTCC ACTGGGCCTT AAGTATGTAC TGAACTTTCC TGCCTCCCTC 001520
001521 ATTTTGCTCT GCTTGTGCAA TTTTTTCCAC CCTCCATCTC TGTCAAACGT AAGCCTTCCT GACCTCTAAG ACCTACCTTT 001600
001601 GTCATGTACC TTTACCCTCA GGCAAGGAGC AATCTCTTCT CTTCCTCTTC TACCTTGCTG TAGCTTCTCC CCAAGGATTT 001680
001681 ATCACATTCT GCCTTGAATC ATAGGGAACA GCATGTGTAG TGGAATGAAC ACAGGCCTCT GAATCCAAGA TACGAGTTTA 001760
001761 AATCCCAGCT TTGGAGGTGG TTACTTAAAG TCTCAGTGCC TTCATTCTTC TTCCTATATA AAGTAGATAT TACAATATCT 001840
001841 AACTTACAGA GTCATTGGGA GCTATACATG CAGCGATTGG GTAAAGCACC TGGCACATGG CAAGCGATTA GCAAATGCTG 001920
001921 GTTACTTCTA CTTCTTTCTC TTCCCTTTTC CCAGTCTATC ATAATT