Difference between revisions of "NONHSAT009262"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CATGTGCCAGCTTCTGTCCCTGGCCCACAGAGTCACCTTGATAGCTGTGCGCTGCCACAGGGACTGCTGCAGCCTCAGGATGGTCTATGCTGTGGGGAGGGCCTGCAGGACTGGGGTCTTTCTGACCTGGAATGAATATAGAGCATAGGTGGACCTATTTCCTGCTGCCAGATTTAAGAAGTTTGCCACAGAAAATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCAGAAGGTTCAGAAGGGCAGAAAAATAAACATGTACAAGAATCACAAATGAAAGCCAGCAAGGGACTCTGTGAGCCACTGAATGGAGATGGAGATGAAAGTGCAGAGTCTTGTGCAAAGCCTGTGAAGCAAATCATAGAGCCGGCACCTCGAGTGAGCAGAGACATTTTCTTACATCGGAGGCTTTGTCGTCGTCTACACTGATGGCTACTGCTCCAGTAATGGGTGGAGGAGAGCACTAGTGGGAACTGACGTTTACTGGGGGCCAGGCCATCCTTTAAATGTAGGCATTAGACTTCCTGGGTGACAGACAAACCAAAGAGCAGAAAATCATGCAGCCTGCAACACCATTGAACAAGCAAAGGCTGAAAACATCAATAAATTGGTTCTGTACACAGATAGTATGTTTGCTATAAATGGTATAACTAACTGGGTTCAAGGTAGGAAGAAGAACAGGTGGAAGACAAGTACAGGGAAATAGGTGATGAACAAAAAGGACTTTGTGGCACTGGAGAAGCTCAGTCAAGGCATGGACATTCAGTGGATACTTGTTCCTGGTCATCCAGGGTGTATTGGCAATGAAGAAGCTGATAGATTAGCAAGAGGAGCTAAACATTCTGAAGACTAA</dnaseq>| | sequence = <dnaseq>CATGTGCCAGCTTCTGTCCCTGGCCCACAGAGTCACCTTGATAGCTGTGCGCTGCCACAGGGACTGCTGCAGCCTCAGGATGGTCTATGCTGTGGGGAGGGCCTGCAGGACTGGGGTCTTTCTGACCTGGAATGAATATAGAGCATAGGTGGACCTATTTCCTGCTGCCAGATTTAAGAAGTTTGCCACAGAAAATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCAGAAGGTTCAGAAGGGCAGAAAAATAAACATGTACAAGAATCACAAATGAAAGCCAGCAAGGGACTCTGTGAGCCACTGAATGGAGATGGAGATGAAAGTGCAGAGTCTTGTGCAAAGCCTGTGAAGCAAATCATAGAGCCGGCACCTCGAGTGAGCAGAGACATTTTCTTACATCGGAGGCTTTGTCGTCGTCTACACTGATGGCTACTGCTCCAGTAATGGGTGGAGGAGAGCACTAGTGGGAACTGACGTTTACTGGGGGCCAGGCCATCCTTTAAATGTAGGCATTAGACTTCCTGGGTGACAGACAAACCAAAGAGCAGAAAATCATGCAGCCTGCAACACCATTGAACAAGCAAAGGCTGAAAACATCAATAAATTGGTTCTGTACACAGATAGTATGTTTGCTATAAATGGTATAACTAACTGGGTTCAAGGTAGGAAGAAGAACAGGTGGAAGACAAGTACAGGGAAATAGGTGATGAACAAAAAGGACTTTGTGGCACTGGAGAAGCTCAGTCAAGGCATGGACATTCAGTGGATACTTGTTCCTGGTCATCCAGGGTGTATTGGCAATGAAGAAGCTGATAGATTAGCAAGAGGAGCTAAACATTCTGAAGACTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG004182]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 19:53, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT009262 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
857 nt |
| Genomic location |
chr1+:210477029..210477885 |
| Exon number |
1 |
| Exons |
210477029..210477885 |
| Genome context |
|
| Sequence |
000001 CATGTGCCAG CTTCTGTCCC TGGCCCACAG AGTCACCTTG ATAGCTGTGC GCTGCCACAG GGACTGCTGC AGCCTCAGGA 000080
000081 TGGTCTATGC TGTGGGGAGG GCCTGCAGGA CTGGGGTCTT TCTGACCTGG AATGAATATA GAGCATAGGT GGACCTATTT 000160 000161 CCTGCTGCCA GATTTAAGAA GTTTGCCACA GAAAATGAGG CCTGGGCCTT TGTCAGGAAA TCTGCAAGCC CAGAAGGTTC 000240 000241 AGAAGGGCAG AAAAATAAAC ATGTACAAGA ATCACAAATG AAAGCCAGCA AGGGACTCTG TGAGCCACTG AATGGAGATG 000320 000321 GAGATGAAAG TGCAGAGTCT TGTGCAAAGC CTGTGAAGCA AATCATAGAG CCGGCACCTC GAGTGAGCAG AGACATTTTC 000400 000401 TTACATCGGA GGCTTTGTCG TCGTCTACAC TGATGGCTAC TGCTCCAGTA ATGGGTGGAG GAGAGCACTA GTGGGAACTG 000480 000481 ACGTTTACTG GGGGCCAGGC CATCCTTTAA ATGTAGGCAT TAGACTTCCT GGGTGACAGA CAAACCAAAG AGCAGAAAAT 000560 000561 CATGCAGCCT GCAACACCAT TGAACAAGCA AAGGCTGAAA ACATCAATAA ATTGGTTCTG TACACAGATA GTATGTTTGC 000640 000641 TATAAATGGT ATAACTAACT GGGTTCAAGG TAGGAAGAAG AACAGGTGGA AGACAAGTAC AGGGAAATAG GTGATGAACA 000720 000721 AAAAGGACTT TGTGGCACTG GAGAAGCTCA GTCAAGGCAT GGACATTCAG TGGATACTTG TTCCTGGTCA TCCAGGGTGT 000800 000801 ATTGGCAATG AAGAAGCTGA TAGATTAGCA AGAGGAGCTA AACATTCTGA AGACTAA |
Predicted Small Protein
| Name | NONHSAT009262_smProtein_131:280 |
| Length | 50 |
| Molecular weight | 5862.8601 |
| Aromaticity | 0.0816326530612 |
| Instability index | 76.3979591837 |
| Isoelectric point | 10.7482299805 |
| Runs | 7 |
| Runs residual | 0.019194704909 |
| Runs probability | 0.0418149241679 |
| Amino acid sequence | MNIEHRWTYFLLPDLRSLPQKMRPGPLSGNLQAQKVQKGRKINMYKNHK |
| Secondary structure | LLLLLLEEEEELLLLLLLLLLLLLLLLLLHHHHHHHHLLLLEEEELLLL |
| PRMN | - |
| PiMo | - |
